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Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater .i.Actinobacteria./i
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SYSNO ASEP 0328168 Druh ASEP J - Článek v odborném periodiku Zařazení RIV J - Článek v odborném periodiku Poddruh J Článek ve WOS Název Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria./i Překlad názvu Aktinorodopsinové geny objeveny v rozličných sladkovodních habitatech a mezi kultivovanými sladkovodními Aktinobakteriemi Tvůrce(i) Sharma, A. K. (CA)
Sommerfeld, K. (CA)
Bullerjahn, G. S. (US)
Matteson, A. R. (US)
Wilhelm, S. W. (US)
Jezbera, Jan (BC-A) RID
Brandt, U. (AT)
Doolittle, W.F. (CA)
Hahn, M.W. (AT)Zdroj.dok. The ISME Journal. - : Nature Publishing Group - ISSN 1751-7362
Roč. 3, č. 6 (2009), s. 726-737Poč.str. 12 s. Jazyk dok. eng - angličtina Země vyd. GB - Velká Británie Klíč. slova rhodopsins ; actinorhodopsin ; freshwater ; Actinobacteria ; Superior ; Erie Vědní obor RIV EE - Mikrobiologie, virologie CEZ AV0Z60170517 - HBU-Z, BC-A (2005-2011) UT WOS 000266530600009 DOI 10.1038/ismej.2009.13 Anotace Microbial rhodopsins are membrane proteins that utilize a retinal chromophore to harvest sunlight for energetic and photosensory functions. Recently, a group of novel rhodopsin sequences named 'actinorhodopsins' (ActRs) was hypothesized to exist among uncultured planktonic Actinobacteria. ActRs were discovered by mining metagenomic data obtained during the Venter Institute's Global Ocean Sampling expedition, from a hypersaline lagoon, two estuaries and a freshwater lake. On the basis of these findings, and many studies that show Actinobacteria are common inhabitants of lakes, we predicted that ActR genes would likely be present in other freshwater habitats and among the genomes of cultivated Actinobacteria. Using degenerate polymerase chain reaction primers, we discovered an ActR gene present in an actinobacterial isolate of the family Microbacteriaceae. Pracoviště Biologické centrum (od r. 2006) Kontakt Dana Hypšová, eje@eje.cz, Tel.: 387 775 214 Rok sběru 2010
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