Počet záznamů: 1
Carrot populations in France and Spain host a complex virome rich in previously uncharacterized viruses
- 1.
SYSNO ASEP 0584345 Druh ASEP J - Článek v odborném periodiku Zařazení RIV J - Článek v odborném periodiku Poddruh J Článek ve WOS Název Carrot populations in France and Spain host a complex virome rich in previously uncharacterized viruses Tvůrce(i) Schonegger, D. (FR)
Marais, A. (FR)
Babalola, B. M. (ES)
Faure, C. (FR)
Lefebvre, M. (FR)
Svanella-Dumas, L. (FR)
Brázdová, Sára (BC-A) RID
Candresse, T. (FR)Celkový počet autorů 8 Číslo článku e02901108 Zdroj.dok. PLoS ONE. - : Public Library of Science - ISSN 1932-6203
Roč. 18, č. 8 (2023)Poč.str. 29 s. Jazyk dok. eng - angličtina Země vyd. US - Spojené státy americké Klíč. slova sequence ; plants ; transmission ; biodiversity ; disease ; protein ; RNA Vědní obor RIV EE - Mikrobiologie, virologie Obor OECD Virology Způsob publikování Open access Institucionální podpora BC-A - RVO:60077344 UT WOS 001051734600036 EID SCOPUS 85168247328 DOI 10.1371/journal.pone.0290108 Anotace High-throughput sequencing (HTS) has proven a powerful tool to uncover the virome of cultivated and wild plants and offers the opportunity to study virus movements across the agroecological interface. The carrot model consisting of cultivated (Daucus carota ssp. sativus) and wild carrot (Daucus carota ssp. carota) populations, is particularly interesting with respect to comparisons of virus communities due to the low genetic barrier to virus flow since both population types belong to the same plant species. Using a highly purified double-stranded RNA-based HTS approach, we analyzed on a large scale the virome of 45 carrot populations including cultivated, wild and off-type carrots (carrots growing within the field and likely representing hybrids between cultivated and wild carrots) in France and six additional carrot populations from central Spain. Globally, we identified a very rich virome comprising 45 viruses of which 25 are novel or tentatively novel. Most of the identified novel viruses showed preferential associations with wild carrots, either occurring exclusively in wild populations or infecting only a small proportion of cultivated populations, indicating the role of wild carrots as reservoir of viral diversity. The carrot virome proved particularly rich in viruses involved in complex mutual interdependencies for aphid transmission such as poleroviruses, umbraviruses and associated satellites, which can be the basis for further investigations of synergistic or antagonistic virus-vector-host relationships. Pracoviště Biologické centrum (od r. 2006) Kontakt Dana Hypšová, eje@eje.cz, Tel.: 387 775 214 Rok sběru 2024 Elektronická adresa https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0290108
Počet záznamů: 1