Počet záznamů: 1
Genomic signatures of climate adaptation in bank voles
- 1.
SYSNO ASEP 0584847 Druh ASEP J - Článek v odborném periodiku Zařazení RIV J - Článek v odborném periodiku Poddruh J Článek ve WOS Název Genomic signatures of climate adaptation in bank voles Tvůrce(i) Folkertsma, R. (AT)
Charbonnel, N. (FR)
Henttonen, H. (FI)
Heroldová, M. (CZ)
Huitu, O. (FI)
Kotlík, Petr (UZFG-Y) RID, ORCID
Manzo, E. (IT)
Paijmans, J. L. A. (GB)
Plantard, O. (FR)
Sándor, A. D. (RO)
Hofreiter, M. (DE)
Eccard, J. A. (DE)Celkový počet autorů 12 Číslo článku e10886 Zdroj.dok. Ecology and Evolution. - : Wiley - ISSN 2045-7758
Roč. 14, č. 3 (2024)Poč.str. 19 s. Forma vydání Online - E Jazyk dok. eng - angličtina Země vyd. US - Spojené státy americké Klíč. slova Clethrionomys glareolus ; climate gradient ; genomic analysis ; local adaptations ; rodent Obor OECD Biology (theoretical, mathematical, thermal, cryobiology, biological rhythm), Evolutionary biology CEP GA20-11058S GA ČR - Grantová agentura ČR Způsob publikování Open access Institucionální podpora UZFG-Y - RVO:67985904 UT WOS 001179940800001 EID SCOPUS 85187109583 DOI 10.1002/ece3.10886 Anotace Evidence for divergent selection and adaptive variation across the landscape can provide insight into a species' ability to adapt to different environments. However, despite recent advances in genomics, it remains difficult to detect the footprints of climate-mediated selection in natural populations. Here, we analysed ddRAD sequencing data (21,892 SNPs) in conjunction with geographic climate variation to search for signatures of adaptive differentiation in twelve populations of the bank vole (Clethrionomys glareolus) distributed across Europe. To identify the loci subject to selection associated with climate variation, we applied multiple genotype-environment association methods, two univariate and one multivariate, and controlled for the effect of population structure. In total, we identified 213 candidate loci for adaptation, 74 of which were located within genes. In particular, we identified signatures of selection in candidate genes with functions related to lipid metabolism and the immune system. Using the results of redundancy analysis, we demonstrated that population history and climate have joint effects on the genetic variation in the pan-European metapopulation. Furthermore, by examining only candidate loci, we found that annual mean temperature is an important factor shaping adaptive genetic variation in the bank vole. By combining landscape genomic approaches, our study sheds light on genome-wide adaptive differentiation and the spatial distribution of variants underlying adaptive variation influenced by local climate in bank voles. Pracoviště Ústav živočišné fyziologie a genetiky Kontakt Jana Zásmětová, knihovna@iapg.cas.cz, Tel.: 315 639 554 Rok sběru 2025 Elektronická adresa https://onlinelibrary.wiley.com/doi/10.1002/ece3.10886
Počet záznamů: 1