Silvimonas soli sp. nov., a new member of Chromobacteriaceae isolated from soil in Norrbyskär island, Sweden\n

0580269 - MBÚ 2024 RIV GB eng J - Článek v odborném periodiku
Jeřábková, M. - Šmrhová, T. - Lopez-Echartea, E. - Dresler, J. - Šuman, J. - Kapinusová, G. - Cajthaml, Tomáš - Škrob, Zdena - Kyclt, R. - Fagerman, J. - Strejček, M. - Uhlík, O.
Silvimonas soli sp. nov., a new member of Chromobacteriaceae isolated from soil in Norrbyskär island, Sweden
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International Journal of Systematic and Evolutionary Microbiology. Roč. 73, č. 9 (2023), č. článku 006048. ISSN 1466-5026. E-ISSN 1466-5034
Grant CEP: GA MŠMT(CZ) LM2023055
Institucionální podpora: RVO:61388971
Klíčová slova: 16S rRNA gene analysis * Chromobacteriaceae * Norrbyskär * novel species * Silvimonas * soil bacteria and whole genome sequencing
Obor OECD: Microbiology
Impakt faktor: 2.8, rok: 2022
Způsob publikování: Omezený přístup
https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.006048

A novel bacterial species is described that was isolated from the soil of Norrbyskär island (Sweden). This Gram-negative, facultatively anaerobic and motile rod, designated 17-6T, was classified in the family Chromobacteriaceae , class Betaproteobacteria , and further characterized by a polyphasic approach. Comparative 16S rRNA gene analysis revealed the potential species novelty of the strain, with Silvimonas terrae (98.20 % similarity) and Silvimonas amylolytica (98.13 %) being its closest type strains. The phylogenetic novelty of the isolate at the level of species was confirmed using phylogenetic analyses based on the whole genome: average nucleotide identity values ranged from 79 to 81 %, average amino acid identity values from 75 to 81 % and percentage of conserved proteins values from 69–81 % with the members of genera Silvimonas and Amantichitinum . On the basis of phenotypic, phylogenetic, functional and genotypic analyses, we propose the isolate as the type strain of a novel species within the genus Silvimonas with the designation Silvimonas soli 17-6T (=DSM 115342T=CCM 9308T).
Trvalý link: https://hdl.handle.net/11104/0349020