Chromosome-scale genome assembly provides insights into rye biology, evolution and agronomic potential

0545921 - ÚEB 2022 RIV US eng J - Článek v odborném periodiku
Rabanus-Wallace, M. T. - Hackauf, B. - Mascher, M. - Lux, T. - Wicker, T. - Gundlach, H. - Baez, M. - Houben, A. - Mayer, K. F. X. - Guo, L. - Poland, J. - Pozniak, C. - Walkowiak, S. - Melonek, J. - Praz, C. R. - Schreiber, M. - Budak, H. - Heuberger, M. - Steuernagel, B. - Wulff, B. - Börner, A. - Byrns, B. - Čížková, Jana - Fowler, D. - Fritz, A. - Himmelbach, A. - Kaithakottil, G. - Keilwagen, J. - Keller, B. - Konkin, D. - Larsen, J. - Li, Q. - Myśków, B. - Padmarasu, S. - Rawat, N. - Sesiz, U. - Biyiklioglu-Kaya, S. - Sharpe, A. J. - Šimková, Hana - Small, I. - Swarbreck, D. - Toegelová, Helena - Tsvetkova, N. - Voylokov, A. V. - Vrána, Jan - Bauer, E. - Bolibok-Bragoszewska, H. - Doležel, Jaroslav - Hall, A. - Jia, J. - Korzun, V. - Laroche, A. - Ma, X. F. - Ordon, F. - Özkan, H. - Rakoczy-Trojanowska, M. - Scholz, U. - Schulman, A. H. - Siekmann, G. - Stojałowski, S. - Tiwari, V.K. - Spannagl, M. - Stein, N.
Chromosome-scale genome assembly provides insights into rye biology, evolution and agronomic potential.
Nature Genetics. Roč. 53, č. 4 (2021), s. 564-573. ISSN 1061-4036. E-ISSN 1546-1718
Grant CEP: GA ČR(CZ) GA17-17564S; GA MŠMT(CZ) EF16_019/0000827
Klíčová slova: Chromosome Mapping * Secale * Translocation Lines
Obor OECD: Biochemistry and molecular biology
Impakt faktor: 41.376, rok: 2021
Způsob publikování: Open access
http://doi.org/10.1038/s41588-021-00807-0

Rye (Secale cereale L.) is an exceptionally climate-resilient cereal crop, used extensively to produce improved wheat varieties via introgressive hybridization and possessing the entire repertoire of genes necessary to enable hybrid breeding. Rye is allogamous and only recently domesticated, thus giving cultivated ryes access to a diverse and exploitable wild gene pool. To further enhance the agronomic potential of rye, we produced a chromosome-scale annotated assembly of the 7.9-gigabase rye genome and extensively validated its quality by using a suite of molecular genetic resources. We demonstrate applications of this resource with a broad range of investigations. We present findings on cultivated rye’s incomplete genetic isolation from wild relatives, mechanisms of genome structural evolution, pathogen resistance, low-temperature tolerance, fertility control systems for hybrid breeding and the yield benefits of rye-wheat introgressions.
Trvalý link: http://hdl.handle.net/11104/0322530