Why size really matters when sequencing plant genomes

0389813 - BC 2013 RIV GB eng J - Článek v odborném periodiku
Kelly, L.J. - Leitch, A.R. - Fay, M. F. - Renny-Byfield, S. - Pellicer, J. - Macas, Jiří - Leitch, I.J.
Why size really matters when sequencing plant genomes.
Plant Ecology & Diversity. Roč. 5, č. 4 (2012), s. 415-425. ISSN 1755-0874. E-ISSN 1755-1668
Výzkumný záměr: CEZ:AV0Z50510513
Institucionální podpora: RVO:60077344
Klíčová slova: C-value * genome assembly * genome size evolution * genome sequencing
Kód oboru RIV: EB - Genetika a molekulární biologie
Impakt faktor: 0.924, rok: 2012

Genome sequencing has been restricted to species with a small genome size. With the advent of second- and third-generation sequencing technologies, the potential to sequence genomes of all sizes is becoming a reality. As the field of whole genome sequencing has developed, there has been a growing appreciation of the need to better represent the major lineages of the plant tree of life, rather than just those that contain economically important taxa. We argue that as well as accounting for phylogenetic diversity when selecting species to analyse, in order to gain a comprehensive understanding of genome evolution, large-scale sequencing projects also need to reflect the diversity of genome sizes in plants. In this article we briefly outline evidence from the literature to support this view.
Trvalý link: http://hdl.handle.net/11104/0218694