Počet záznamů: 1
Understanding RNA flexibility using explicit solvent simulations: The ribosomal and group I intron reverse kink-turn motifs
- 1.0370399 - BFÚ 2012 RIV US eng J - Článek v odborném periodiku
Sklenovský, P. - Florová, P. - Banáš, P. - Réblová, Kamila - Lankaš, Filip - Otyepka, M. - Šponer, Jiří
Understanding RNA flexibility using explicit solvent simulations: The ribosomal and group I intron reverse kink-turn motifs.
Journal of Chemical Theory and Computation. Roč. 7, č. 9 (2011), s. 2963-2980. ISSN 1549-9618. E-ISSN 1549-9626
Grant CEP: GA ČR(CZ) GD203/09/H046; GA AV ČR(CZ) IAA400040802; GA MŠMT(CZ) LC512; GA AV ČR(CZ) KJB400040901; GA ČR(CZ) GA203/09/1476; GA ČR(CZ) GAP208/11/1822; GA MŠMT(CZ) LC06030
Grant ostatní: GA ČR(CZ) GPP301/11/P558
Program: GP
Výzkumný záměr: CEZ:AV0Z50040507; CEZ:AV0Z50040702; CEZ:AV0Z40550506
Klíčová slova: reverse kink-turn * simulation * flexibility
Kód oboru RIV: BO - Biofyzika
Impakt faktor: 5.215, rok: 2011
We report unrestrained, explicit solvent molecular dynamics simulations of ribosomal and intron reverse kink-turns (54 simulations in total) with different variants (ff94, ff99, ff99bsc0, ff99chiOL, and ff99bsc0chiOL) of the Cornell et al. force field. The simulations characterize the directional intrinsic flexibility of reverse kink-turns pertinent to their folded functional geometries.
Trvalý link: http://hdl.handle.net/11104/0204220
Počet záznamů: 1