On the role of the cis Hoogsteen:sugar-edge family of base pairs in platforms and triplets-quantum chemical insights into RNA structural biology

0344071 - BFÚ 2011 RIV US eng J - Článek v odborném periodiku
Sharma, P. - Šponer, Judit E. - Šponer, Jiří - Sharma, S. - Bhattacharyya, D. - Mitra, A.
On the role of the cis Hoogsteen:sugar-edge family of base pairs in platforms and triplets-quantum chemical insights into RNA structural biology.
Journal of Physical Chemistry B. Roč. 114, č. 9 (2010), s. 3307-3320. ISSN 1520-6106. E-ISSN 1520-5207
Grant CEP: GA MŠMT(CZ) LC06030; GA AV ČR(CZ) IAA400040802; GA ČR(CZ) GA203/09/1476
Výzkumný záměr: CEZ:AV0Z50040507; CEZ:AV0Z50040702
Klíčová slova: quantum chemistry * base pairs * cis Hoogsteen/Sugar edge
Kód oboru RIV: BO - Biofyzika
Impakt faktor: 3.603, rok: 2010

Base pairs belonging to the cis Hoogsteen/sugar-edge (H:S) family play important structural roles in folded RNA molecules. We report results of analysis of 30 representative examples spanning 16 possible base pair combinations. The study, involving alternative classification of base pairs and triplets, provides insights into intrinsic properties of these base pairs and their possible structural and functional roles.
Trvalý link: http://hdl.handle.net/11104/0005935