Search results
- 1.0543058 - ÚTIA 2022 RIV US eng C - Conference Paper (international conference)
Papáček, Štěpán - Lynnyk, Volodymyr
Quasi-steady state assumption vs. delayed quasi-steady state assumption: Model reduction tools for biochemical processes.
Proceedings of the 2021 23rd International Conference on Process Control (PC). Piscataway: IEEE, 2021 - (Paulen, R.; Fikar, M.), s. 278-283, č. článku 66. ISBN 978-1-6654-0329-0.
[International Conference on Process Control 2021 /23./. Štrbské Pleso (SK), 01.06.2021-04.06.2021]
R&D Projects: GA ČR(CZ) GA19-05872S
Institutional support: RVO:67985556
Keywords : Mathematical modelling * Model reduction * Systems biology * Biochemical network
OECD category: Applied mathematics
Permanent Link: http://hdl.handle.net/11104/0320436 - 2.0534211 - ÚVGZ 2021 RIV GB eng J - Journal Article
Keating, S. M. - Waltemath, D. - Koenig, M. - Zhang, F. - Draeger, A. - Chaouiya, C. - Bergmann, F. - Finney, A. - Gillespie, C. S. - Helikar, T. - Hoops, S. - Malik-Sheriff, R. S. - Moodie, S. L. - Moraru, I. I. - Myers, C. - Naldi, A. - Olivier, B. G. - Sahle, S. - Schaff, J. C. - Smith, L. P. - Swat, M. J. - Thieffry, D. - Watanabe, L. - Wilkinson, D. J. - Blinov, M. L. - Begley, K. - Faeder, J. R. - Gomez, H. F. - Hamm, T. M. - Inagaki, Y. - Liebermeister, W. - Lister, A. L. - Lucio, D. - Mjolsness, E. - Proctor, C. - Červený, Jan … Total 53 authors
SBML Level 3: an extensible format for the exchange and reuse of biological models.
Molecular Systems Biology. Roč. 16, č. 8 (2020), č. článku e9110. ISSN 1744-4292. E-ISSN 1744-4292
R&D Projects: GA MŠMT(CZ) LM2015055; GA ČR(CZ) GA18-24397S; GA MŠMT(CZ) EF16_026/0008413
Institutional support: RVO:86652079
Keywords : systems biology * markup language * simulation * standards * software * information * environment * annotation * repository * ontology * computational modeling * file format * interoperability * reproducibility * systems biology
OECD category: Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)
Impact factor: 11.429, year: 2020
Method of publishing: Open access
https://www.embopress.org/doi/full/10.15252/msb.20199110
Permanent Link: http://hdl.handle.net/11104/0312475 - 3.0507507 - ÚMG 2020 RIV CZ eng J - Journal Article
Šeda, O. - Šedová, Lucie - Vcelak, J. - Vaňková, M. - Liška, F. - Bendlova, B.
ZBTB16 and Metabolic Syndrome: a Network Perspective.
Physiological Research. Roč. 66, č. 3 (2017), s. 357-365. ISSN 0862-8408. E-ISSN 1802-9973
Institutional support: RVO:68378050
Keywords : Metabolic syndrome * Systems biology * Pleiotropy * Animal models
OECD category: Cell biology
Impact factor: 1.324, year: 2017
Method of publishing: Limited access
https://doi.org/10.33549/physiolres.933730
Permanent Link: http://hdl.handle.net/11104/0298483 - 4.0498288 - ÚVGZ 2019 RIV US eng J - Journal Article
Červený, Jan - Schreiber, I. - Šafránek, D.
2018 International Conference on Biotechnology and Bioengineering (ICBB2018), Budapest, Hungary, 24-26 October 2018.
Basic & Clinical Pharmacology & Toxicology. Roč. 124, č. 1 (2018), s. 3-43. ISSN 1742-7835. E-ISSN 1742-7843
Institutional support: RVO:86652079
Keywords : phenotypization * microalgae * biotechnology * systems biology * modeling * online tools
OECD category: Environmental biotechnology
Impact factor: 2.452, year: 2018
Permanent Link: http://hdl.handle.net/11104/0290677 - 5.0498285 - ÚVGZ 2019 RIV US eng A - Abstract
Červený, Jan - Schreiber, I. - Šafránek, D.
Systems biology approaches for advancing biotechnology of microalgae.
Basic & Clinical Pharmacology & Toxicology. Wiley. Roč. 124, č. 1 (2018), s. 8-8. ISSN 1742-7835. E-ISSN 1742-7843.
[International Conference on Biotechnology and Bioengineering. 24.12.2018-26.12.2018, Budapešť]
Institutional support: RVO:86652079
Keywords : phenotypization * microalgae * biotechnology * systems biology * modeling * online tools
OECD category: Environmental biotechnology
Permanent Link: http://hdl.handle.net/11104/0290674 - 6.0488938 - ÚVGZ 2019 RIV IE eng J - Journal Article
Faizi, M. - Zavřel, Tomáš - Loureiro, C. - Červený, Jan - Steuer, Ralf
A model of optimal protein allocation during phototrophic growth.
Biosystems. Roč. 166, apr (2018), s. 26-36. ISSN 0303-2647. E-ISSN 1872-8324
R&D Projects: GA MŠMT(CZ) LO1415; GA ČR(CZ) GA15-17367S; GA MŠMT(CZ) LM2015055
Institutional support: RVO:86652079
Keywords : Cellular protein economy * Cyanobacteria * Microbial growth laws * Photosynthesis * Resource allocation * Systems biology
OECD category: Environmental biotechnology
Impact factor: 1.623, year: 2018
Permanent Link: http://hdl.handle.net/11104/0283449 - 7.0479472 - ÚVGZ 2022 RIV GB eng J - Journal Article
Großkinsky, D.K. - Syaifullah, S. J. - Roitsch, Thomas
Integration of multi-omics techniques and physiological phenotyping within a holistic phenomics approach to study senescence in model and crop plants.
Journal of Experimental Botany. Roč. 69, č. 4 (2018), s. 825-844. ISSN 0022-0957. E-ISSN 1460-2431
R&D Projects: GA MŠMT(CZ) LO1415
Institutional support: RVO:86652079
Keywords : integrated approaches * multi-omics * phenomics * plant development * plant–environment interactions * plant phenotyping * plant physiology * plant senescence * senescence programme * systems biology
OECD category: Environmental sciences (social aspects to be 5.7)
Impact factor: 5.360, year: 2018
Method of publishing: Open access
https://academic.oup.com/jxb/article/69/4/825/4372214
Permanent Link: http://hdl.handle.net/11104/0275465 - 8.0479060 - BC 2018 RIV US eng J - Journal Article
Hackenberg, M. - Langenberger, D. - Schwarz, Alexandra - Erhart, Jan - Kotsyfakis, Michalis
In silico target network analysis of de novo-discovered, tick saliva-specific microRNAs reveals important combinatorial effects in their interference with vertebrate host physiology.
RNA. Roč. 23, č. 8 (2017), s. 1259-1269. ISSN 1355-8382. E-ISSN 1469-9001
Institutional support: RVO:60077344
Keywords : tick-vertebrate host interaction * deep-sequencing * microRNA * gene target prediction * interactomes/systems biology * disease biology
OECD category: Biochemistry and molecular biology
Impact factor: 4.490, year: 2017
Permanent Link: http://hdl.handle.net/11104/0275083 - 9.0470831 - ÚVGZ 2017 RIV CZ eng M - Monography Chapter
Červený, Jan - Zavřel, Tomáš - Chmelík, Dominik - Búzová, Diana - Fedorko, Jan - Literáková, Petra - Sukačová, Kateřina - Segečová, Anna - Roitsch, Thomas
Microalgal adaptive biotechnologies for a sustainable future.
Global Change & Ecosystems. Volume 2. Brno: Ústav výzkumu globální změny AV ČR, v. v.i., 2016 - (Vačkář, D.; Janouš, D.), s. 147-159. ISBN 978-80-87902-17-2
R&D Projects: GA MŠMT(CZ) LO1415
Institutional support: RVO:67179843
Keywords : Biocontrol * Bioproduction * Breeding * Climate Change * Optimization * Systems Biology
Subject RIV: EI - Biotechnology ; Bionics
Permanent Link: http://hdl.handle.net/11104/0268379 - 10.0468733 - BC 2017 RIV GB eng J - Journal Article
de la Fuente, J. - Kopáček, Petr - Lew-Tabor, A. - Maritz-Olivier, C.
Strategies for new and improved vaccines against ticks and tick-borne diseases.
Parasite immunology. Roč. 38, č. 12 (2016), s. 754-769. ISSN 0141-9838. E-ISSN 1365-3024
R&D Projects: GA ČR GA13-11043S
EU Projects: European Commission(XE) 278976 - ANTIGONE
Institutional support: RVO:60077344
Keywords : interactomics * reverse genetics * systems biology * tick * vaccine * vaccinology
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 2.493, year: 2016
Permanent Link: http://hdl.handle.net/11104/0266565