Search results
- 1.0580396 - MBÚ 2024 RIV US eng M - Monography Chapter
Štursová, Martina - López-Mondejár, Rubén - Baldrian, Petr
Investigating the Bacterial and Fungal Communities Involved in Dead Biomass Degradation in Forest Soils.
Microbial Environmental Genomics (MEG). New York: Humana, 2023 - (Martin, F.; Uroz, S.), s. 157-168. Methods in Molecular Biology. ISBN 978-1-0716-2870-6
R&D Projects: GA ČR(CZ) GA20-14961S; GA ČR(CZ) GA22-30769S
Institutional support: RVO:61388971
Keywords : Stable isotope probing * Microbial communities * Soil ecology * Organic matter decomposition * Metagenomics * metatranscriptomics
OECD category: Microbiology
Permanent Link: https://hdl.handle.net/11104/0349169 - 2.0576258 - BC 2024 RIV US eng M - Monography Chapter
Jameson, E. - Taubert, M. - Angel, Roey - Coyotzi, S. - Chen, Y. - Eyice, Ö. - Schäfer, H. - Murrell, J.C. - Neufeld, J.D. - Dumont, M.G.
DNA-, RNA-, and protein-based stable-isotope probing for high-throughput biomarker analysis of active microorganisms.
Metagenomics: Methods and Protocols, Methods in Molecular Biology. New York: Humana, 2023 - (Streit, W.; Daniel, R.), Roč. 2555 (2023), s. 261-282. ISBN 978-1-0716-2794-5
Institutional support: RVO:60077344
Keywords : DNA * metagenomics * metatranscriptomics * protein * proteomics * RNA * Stable-isotope probing
OECD category: Microbiology
Permanent Link: https://hdl.handle.net/11104/0345837 - 3.0564845 - MBÚ 2023 RIV DE eng J - Journal Article
Vergani, L. - Mapelli, F. - Folkmanová, M. - Papík, J. - Jansa, Jan - Uhlík, O. - Borin, S.
DNA stable isotope probing on soil treated by plant biostimulation and flooding revealed the bacterial communities involved in PCB degradation.
Scientific Reports. Roč. 12, č. 1 (2022), č. článku 19232. ISSN 2045-2322. E-ISSN 2045-2322
EU Projects: European Commission(CZ) 841317
Institutional support: RVO:61388971
Keywords : Polychlorinated biphenyl (PCB) * microbial PCB degraders * stable isotope probing SIP incubation * illumina MiSeq * sequencing * soil bacterial communities * Betaproteobacteria * Actinobacteria
OECD category: Microbiology
Impact factor: 4.6, year: 2022
Method of publishing: Open access
https://www.nature.com/articles/s41598-022-23728-2
Permanent Link: https://hdl.handle.net/11104/0336409 - 4.0563402 - BÚ 2023 RIV NL eng J - Journal Article
Forczek, S. T. - Bukovská, P. - Püschel, David - Janoušková, Martina - Blažková, Alena - Jansa, J.
Drought rearranges preferential carbon allocation to arbuscular mycorrhizal community members co-inhabiting roots of Medicago truncatula.
Environmental and Experimental Botany. Roč. 199, JUL 2022 (2022), č. článku 104897. ISSN 0098-8472. E-ISSN 1873-7307
R&D Projects: GA ČR(CZ) GA17-12166S
Institutional support: RVO:67985939
Keywords : arbuscular mycorrhizal symbiosis * drought stress * quantitative stable isotope probing (qSIP)
OECD category: Plant sciences, botany
Impact factor: 5.7, year: 2022
Method of publishing: Limited access
https://doi.org/10.1016/j.envexpbot.2022.104897
Permanent Link: https://hdl.handle.net/11104/0336067 - 5.0562838 - MBÚ 2023 RIV NL eng J - Journal Article
Forczek, Sándor Tamas - Bukovská, Petra - Püschel, David - Janoušková, M. - Blažková, A. - Jansa, Jan
Drought rearranges preferential carbon allocation to arbuscular mycorrhizal community members co-inhabiting roots of Medicago truncatula.
Environmental and Experimental Botany. Roč. 199, JUL 2022 (2022), č. článku 104897. ISSN 0098-8472. E-ISSN 1873-7307
R&D Projects: GA ČR(CZ) GA17-12166S
Institutional support: RVO:61388971
Keywords : Arbuscular mycorrhizal symbiosis * 13 C isotopic labeling * Drought stress * Environmental context * Signature fatty acids * Quantitative stable isotope probing (qSIP) * Species competition * Synthetic communities
OECD category: Microbiology
Impact factor: 5.7, year: 2022
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/pii/S0098847222001198?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0335028 - 6.0550065 - MBÚ 2022 RIV CH eng J - Journal Article
Polerecky, L. - Eichner, Meri - Masuda, Takako - Zavřel, Tomáš - Rabouille, S. - Campbell, D. A. - Halsey, K.
Calculation and Interpretation of Substrate Assimilation Rates in Microbial Cells Based on Isotopic Composition Data Obtained by nanoSIMS.
Frontiers in Microbiology. Roč. 12, NOV 30 2021 (2021), č. článku 621634. ISSN 1664-302X. E-ISSN 1664-302X
R&D Projects: GA ČR(CZ) GA20-17627S; GA ČR(CZ) GJ20-02827Y; GA MŠMT(CZ) EF16_026/0008413; GA ČR(CZ) GA18-24397S; GA MŠMT(CZ) EF16_027/0007990
Institutional support: RVO:61388971 ; RVO:86652079
Keywords : stable isotope probing * assimilation rates * storage inclusions * cell growth model
OECD category: Microbiology
Impact factor: 6.064, year: 2021
Method of publishing: Open access
https://hal.archives-ouvertes.fr/hal-03469894/
Permanent Link: http://hdl.handle.net/11104/0325915 - 7.0536304 - BC 2021 RIV GB eng J - Journal Article
Wu, W. - Meador, Travis Blake - Könneke, M. - Elvert, M. - Wegener, G. - Hinrichs, K.-U.
Substrate-dependent incorporation of carbon and hydrogen for lipid biosynthesis by Methanosarcina barkeri.
Environmental Microbiology Reports. Roč. 12, č. 5 (2020), s. 555-567. ISSN 1758-2229. E-ISSN 1758-2229
R&D Projects: GA MŠMT(CZ) LM2015075; GA MŠMT(CZ) EF16_013/0001782
Institutional support: RVO:60077344
Keywords : stable isotope probing * carbon fixation * methanogen * anaplerotic
OECD category: Biochemistry and molecular biology
Impact factor: 3.541, year: 2020
Method of publishing: Open access
https://sfamjournals.onlinelibrary.wiley.com/doi/pdfdirect/10.1111/1758-2229.12876
Permanent Link: http://hdl.handle.net/11104/0315096 - 8.0472656 - MBÚ 2017 RIV US eng M - Monography Chapter
Větrovský, Tomáš - Štursová, Martina - Baldrian, Petr
Fungal Communities in Soils: Soil Organic Matter Degradation.
Microbial Environmental Genomics (MEG). Totowa: HUMANA PRESS INC, 2016 - (Martin, F.; Uroz, S.), 89-100-89-100. Methods in Molecular Biology. ISBN 978-1-4939-3369-3
R&D Projects: GA ČR GA13-06763S
Institutional support: RVO:61388971
Keywords : Stable isotope probing * Microbial communities * Soil ecology
Subject RIV: EE - Microbiology, Virology
Permanent Link: http://hdl.handle.net/11104/0269905 - 9.0454407 - ÚMG 2016 RIV CH eng J - Journal Article
Wald, J. - Hroudová, Miluše - Jansa, Jan - Vrchotová, B. - Macek, T. - Uhlík, O.
Pseudomonads Rule Degradation of Polyaromatic Hydrocarbons in Aerated Sediment.
Frontiers in Microbiology. Roč. 6, č. 1268 (2015). ISSN 1664-302X. E-ISSN 1664-302X
Institutional support: RVO:68378050 ; RVO:61388971
Keywords : biodegradation * polyaromatic hydrocarbons * stable isotope probing
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 4.165, year: 2015
Permanent Link: http://hdl.handle.net/11104/0255088 - 10.0371337 - ÚOCHB 2012 RIV GB eng M - Monography Chapter
Uhlík, O. - Musilová, L. - Demnerová, K. - Macek, Tomáš - Macková, M.
Stable isotope probing: uses in metagenomics.
Metagenomics: Current Innovations and Future Trends. Wymondham: Caister Academic Press, 2011 - (Marco, D.), s. 89-97. ISBN 978-1-904455-87-5
Institutional research plan: CEZ:AV0Z40550506
Keywords : Metagenomics * stable isotope probing * high-throughput sequencing * microbial ecology
Subject RIV: EI - Biotechnology ; Bionics
http://www.horizonpress.com/metagenomics-advances
Permanent Link: http://hdl.handle.net/11104/0204874