Search results

  1. 1.
    0636657 - MBÚ 2026 RIV US eng J - Journal Article
    Wysocka, Anna - Kulik, Natalia - Shukla, Mahendra K. - Opatíková, M. - Kouřil, R. - Jackson, P. J. - Brindley, A.A. - Janouškovec, Jan - Kiss, Eva - Hitchcock, A. - Komenda, Josef - Hunter, C. N. - Sobotka, Roman
    High-light-inducible proteins control associations between chlorophyll synthase and the Photosystem II biogenesis factor Ycf39.
    Plant Physiology. Roč. 198, č. 2 (2025), č. článku kiaf213. ISSN 0032-0889. E-ISSN 1532-2548
    R&D Projects: GA ČR(CZ) GA22-03092S; GA MŠMT(CZ) EH22_008/0004624
    EU Projects: European Commission(CZ) 854126 - PhotoRedesign
    Institutional support: RVO:61388971
    Keywords : synechocystis-sp pcc-6803 * native electrophoresis * histidine-residues * complex * accumulation * polypeptides * acclimation * expression * stability * hcf244
    OECD category: Plant sciences, botany
    Impact factor: 6.6, year: 2023 ; AIS: 1.894, rok: 2023
    Method of publishing: Open access
    Result website:
    https://academic.oup.com/plphys/article/198/2/kiaf213/8148667?login=trueDOI: https://doi.org/10.1093/plphys/kiaf213
    Permanent Link: https://hdl.handle.net/11104/0367655
     
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    Wysocka_2025_Plant Physiology 198, kiaf213.pdf01.3 MBPublisher’s postprintopen-access
     
  2. 2.
    0618539 - MBÚ 2026 RIV US eng J - Journal Article
    Qi, M. - Taunt, H.N. - Bečková, Martina - Xia, Z. - Trinugroho, J.P. - Komenda, Josef - Nixon, P. J.
    Enhancing the production of chlorophyll f in the cyanobacterium Synechocystis sp. PCC 6803.
    Physiologia Plantarum. Roč. 177, č. 2 (2025), č. článku Issue2. ISSN 0031-9317. E-ISSN 1399-3054
    R&D Projects: GA MŠMT(CZ) EH22_008/0004624
    EU Projects: European Commission(CZ) 854126 - PhotoRedesign
    Institutional support: RVO:61388971
    Keywords : chlorophyll f * Synechocystis sp. PCC 6803 * cyanobacteria * microalgae
    OECD category: Microbiology
    Impact factor: 5.4, year: 2023 ; AIS: 0.916, rok: 2023
    Method of publishing: Open access
    Result website:
    https://onlinelibrary.wiley.com/doi/10.1111/ppl.70169DOI: https://doi.org/10.1111/ppl.70169
    Permanent Link: https://hdl.handle.net/11104/0365412
     
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    Qi_2025_Physiologia Plantarum 177, e70169.pdf04.1 MBPublisher’s postprintopen-access
     
    Research data: data1
  3. 3.
    0603552 - MBÚ 2025 RIV US eng J - Journal Article
    Komenda, Josef - Sobotka, Roman - Nixon, P. J.
    The biogenesis and maintenance of PSII: Recent advances and current challenges.
    Plant Cell. Roč. 36, č. 10 (2024), s. 3997-4013. ISSN 1040-4651. E-ISSN 1532-298X
    R&D Projects: GA ČR(CZ) GA22-03092S
    EU Projects: European Commission(CZ) 854126 - PhotoRedesign
    Institutional support: RVO:61388971
    Keywords : ii reaction-center * sp pcc 6803 * synechocystis sp pcc-6803 * cp43-less photosystem-ii * thylakoid ftsh protease * reaction-center complex * psb27 assembly factor * one-helix protein1 * cab-like proteins * d1 protein
    OECD category: Biochemistry and molecular biology
    Impact factor: 10, year: 2023 ; AIS: 3.417, rok: 2023
    Method of publishing: Open access
    Result website:
    https://academic.oup.com/plcell/article/36/10/3997/7628888?login=trueDOI: https://doi.org/10.1093/plcell/koae082
    Permanent Link: https://hdl.handle.net/11104/0360900
     
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    The biogenesis and maintenance of PSII.pdf11.7 MBPublisher’s postprintopen-access
     
  4. 4.
    0603228 - MBÚ 2025 RIV US eng J - Journal Article
    Schmidt, N. - Stappert, N. - Nimura-Matsune, K. - Watanabe, S. - Sobotka, Roman - Hagemann, M. - Hess, W. R.
    Epigenetic control of tetrapyrrole biosynthesis by m4 C DNA methylation in a cyanobacterium.
    Dna Research. Roč. 31, č. 6 (2024), č. článku dsae035. ISSN 1340-2838. E-ISSN 1756-1663
    R&D Projects: GA MŠMT(CZ) EH22_008/0004624
    Institutional support: RVO:61388971
    Keywords : protoporphyrinogen ix oxidase * sp pcc 6803 * escherichia-coli * rna-polymerase * transcription initiation * recognition * n4-methylcytosine * identification * ferrochelatase * resistance * cyanobacteria * epigenetic modifications * HemJ * DNA methyltransferase * tetrapyrrole biosynthesis
    OECD category: Microbiology
    Impact factor: 3.9, year: 2023 ; AIS: 1.152, rok: 2023
    Method of publishing: Open access
    Result website:
    https://academic.oup.com/dnaresearch/article/31/6/dsae035/7918679?login=trueDOI: https://doi.org/10.1093/dnares/dsae035
    Permanent Link: https://hdl.handle.net/11104/0360612
     
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    Epigenetic control.pdf01.6 MBPublisher’s postprintopen-access
     
  5. 5.
    0598265 - MBÚ 2025 RIV GB eng J - Journal Article
    Skotnicová, Petra - Srivastava, Amit - Aggarwal, Divya - Talbot, Jana - Karlínová, I. - Moos, M. - Mareš, Jan - Bučinská, Lenka - Koník, Peter - Šimek, P. - Tichý, Martin - Sobotka, Roman
    A thylakoid biogenesis BtpA protein is required for the initial step of tetrapyrrole biosynthesis in cyanobacteria.
    New Phytologist. Roč. 241, č. 3 (2024), s. 1236-1249. ISSN 0028-646X. E-ISSN 1469-8137
    R&D Projects: GA ČR(CZ) GX19-29225X
    EU Projects: European Commission(CZ) 854126 - PhotoRedesign
    Institutional support: RVO:61388971
    Keywords : synechocystis sp pcc-6803 * sp pcc 6803 * photosystem-ii * heat-repeats * chlorophyll * identification * membrane * isca * accumulation * stabilizes * BtpA * cyanobacteria * glutamyl-tRNA reductase * Synechocystis sp. PCC 6803 * tetrapyrrole biosynthesis
    OECD category: Microbiology
    Impact factor: 8.3, year: 2023 ; AIS: 2.706, rok: 2023
    Method of publishing: Open access
    Result website:
    https://nph.onlinelibrary.wiley.com/doi/full/10.1111/nph.19397DOI: https://doi.org/10.1111/nph.19397
    Permanent Link: https://hdl.handle.net/11104/0355991
     
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    A thylakoid biogenesis BtpA protein is required for the initial step of tetrapyrrole.pdf14.6 MBPublisher’s postprintopen-access
     
  6. 6.
    0597925 - MBÚ 2025 RIV US eng J - Journal Article
    Krynická, Vendula - Komenda, Josef
    The Role of FtsH Complexes in the Response to Abiotic Stress in Cyanobacteria.
    Plant and Cell Physiology. Roč. 65, č. 7 (2024), s. 1103-1114. ISSN 0032-0781. E-ISSN 1471-9053
    R&D Projects: GA ČR(CZ) GA24-10227S; GA MŠMT(CZ) EH22_008/0004624
    EU Projects: European Commission(CZ) 854126 - PhotoRedesign
    Institutional support: RVO:61388971
    Keywords : sp pcc 6803 * synechocystis-sp pcc-6803 * protein p-ii * photosystem-ii * quality-control * high-light * experimental validation * thylakoid membrane * gene-expression * repair * Cyanobacteria * FtsH * Nutrient stress * Photodamage * Photosystem
    OECD category: Microbiology
    Impact factor: 4, year: 2023 ; AIS: 1.084, rok: 2023
    Method of publishing: Open access
    Result website:
    https://academic.oup.com/pcp/article/65/7/1103/7645829?login=trueDOI: https://doi.org/10.1093/pcp/pcae042
    Permanent Link: https://hdl.handle.net/11104/0355707
     
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    Krynická_2024_Plant and Cell Physiology 65, 1103-1114.pdf21.6 MBAuthor’s postprintopen-access
     
  7. 7.
    0585006 - MBÚ 2025 RIV NL eng J - Journal Article
    Koník, Peter - Skotnicová, Petra - Gupta, Sadanand - Tichý, Martin - Sharma, Surbhi - Komenda, Josef - Sobotka, Roman - Krynická, Vendula
    The cyanobacterial FtsH4 protease controls accumulation of protein factors involved in the biogenesis of photosystem I.
    Biochimica Et Biophysica Acta-Bioenergetics. Roč. 1865, č. 1 (2024), č. článku 149017. ISSN 0005-2728. E-ISSN 1879-2650
    R&D Projects: GA ČR(CZ) GX19-29225X; GA ČR(CZ) GJ19-08900Y
    Institutional support: RVO:61388971
    Keywords : synechocystis sp pcc-6803 * sp pcc 6803 * high-light * computational platform * iron-deficiency * quality-control * chlorophyll * complex * d1 * biosynthesis * FtsH4 protease * Synechocystis * Photosystem I * Thylakoid membrane * Assembly factors
    OECD category: Microbiology
    Impact factor: 3.4, year: 2023 ; AIS: 1.132, rok: 2023
    Method of publishing: Limited access
    Result website:
    https://www.sciencedirect.com/science/article/pii/S0005272823000634?via%3DihubDOI: https://doi.org/10.1016/j.bbabio.2023.149017
    Permanent Link: https://hdl.handle.net/11104/0352783
     
  8. 8.
    0580096 - ÚVGZ 2025 RIV US eng J - Journal Article
    Espinoza-Corral, R. - Iwai, M. - Zavřel, Tomáš - Lechno-Yossef, S. - Sutter, M. - Červený, Jan - Niyogi, K. K. - Kerfeld, C.A.
    Phycobilisome protein ApcG interacts with PSII and regulates energy transfer in Synechocystis.
    Plant Physiology. Roč. 194, č. 3 (2024), s. 1383-1396. ISSN 0032-0889. E-ISSN 1532-2548
    Institutional support: RVO:86652079
    Keywords : sp pcc 6803 * state transition * excitation-energy * light * chlorophyll * expression * model * photosynthesis * fluorescence * ultrastructure
    OECD category: Plant sciences, botany
    Impact factor: 6.6, year: 2023 ; AIS: 1.894, rok: 2023
    Method of publishing: Limited access
    Result website:
    https://academic.oup.com/plphys/advance-article/doi/10.1093/plphys/kiad615/7424862?login=trueDOI: https://doi.org/10.1093/plphys/kiad615
    Permanent Link: https://hdl.handle.net/11104/0353074
     
     
  9. 9.
    0575001 - MBÚ 2024 RIV US eng J - Journal Article
    Zhao, Z. - Vercellino, I. - Knoppová, Jana - Sobotka, Roman - Murray, James W. - Nixon, Peter J. - Sazanov, Leonid A. - Komenda, Josef
    The Ycf48 accessory factor occupies the site of the oxygen-evolving manganese cluster during photosystem II biogenesis.
    Nature Communications. Roč. 14, č. 1 (2023), č. článku 4681. ISSN 2041-1723. E-ISSN 2041-1723
    R&D Projects: GA ČR(CZ) GX19-29225X
    EU Projects: European Commission(CZ) 854126 - PhotoRedesign
    Institutional support: RVO:61388971
    Keywords : sp. pcc 6803 * crystal-structure * water-oxidation * initial steps * cryo-em * protein * complex * d1i * insights * subunit
    OECD category: Microbiology
    Impact factor: 14.7, year: 2023 ; AIS: 5.66, rok: 2023
    Method of publishing: Open access
    Result website:
    https://www.nature.com/articles/s41467-023-40388-6DOI: https://doi.org/10.1038/s41467-023-40388-6
    Permanent Link: https://hdl.handle.net/11104/0344876
     
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    The Ycf48 accessory.pdf72.3 MBPublisher’s postprintopen-access
     
  10. 10.
    0558557 - MBÚ 2023 RIV US eng J - Journal Article
    Knoppová, Jana - Sobotka, Roman - Yu, J. - Bečková, Martina - Pilný, Jan - Trinugroho, J. - Csefalvay, Ladislav - Bína, David - Nixon, P. - Komenda, Josef
    Assembly of D1/D2 complexes of photosystem II: Binding of pigments and a network of auxiliary proteins.
    Plant Physiology. Roč. 189, č. 2 (2022), s. 790-804. ISSN 0032-0889. E-ISSN 1532-2548
    R&D Projects: GA ČR(CZ) GX19-29225X; GA MŠMT EF15_003/0000336
    EU Projects: European Commission(CZ) 854126 - PhotoRedesign
    Institutional support: RVO:61388971 ; RVO:60077344
    Keywords : synechocystis sp pcc-6803 * sp pcc 6803 * electron-transport * crystal-structure * early steps * high-light * chlorophyll * repair * mutants * photosynthesis
    OECD category: Microbiology; Biophysics (BC-A)
    Impact factor: 7.4, year: 2022 ; AIS: 2.031, rok: 2022
    Method of publishing: Open access
    Result website:
    https://academic.oup.com/plphys/article/189/2/790/6521047?login=trueDOI: https://doi.org/10.1093/plphys/kiac045
    Permanent Link: http://hdl.handle.net/11104/0332195
     
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    Assembly of D1...D2complexes of photosystem II.pdf11.1 MBPublisher’s postprintopen-access
     

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