Search results
- 1.0598321 - ÚMG 2025 RIV GB eng J - Journal Article
Zancolli, G. - von Reumont, B. M. - Anderluh, G. - Caliskan, F. - Chiusano, M. L. - Froehlich, J. - Hapeshi, E. - Hempel, B. - Ikonomopoulou, M. P. - Jungo, F. - Marchot, P. - de Farias, T. M. - Modica, M. V. - Moran, Y. - Nalbantsoy, A. - Procházka, Jan - Tarallo, A. - Tonello, F. - Vitorino, R. - Zammit, M. L. - Antunes, A.
Web of venom: exploration of big data resources in animal toxin research.
GigaScience. Roč. 13, Jul (2024), č. článku giae054. ISSN 2047-217X. E-ISSN 2047-217X
Institutional support: RVO:68378050
Keywords : mass-spectrometry data * peptide identification * high-accuracy * snake-venom * genome * transcriptome * evolution * insights * ontology * annotation * venom resources * toxin databases * machine learning * drug discovery * antivenom * proteomics * peptidomics * transcriptomics * genomics
OECD category: Biochemistry and molecular biology
Impact factor: 11.8, year: 2023
Method of publishing: Open access
https://academic.oup.com/gigascience/article/doi/10.1093/gigascience/giae054/7753515?login=false
Permanent Link: https://hdl.handle.net/11104/0356358 - 2.0597794 - ÚIACH 2025 RIV US eng J - Journal Article
Václavek, Tomáš - Vereshchagina, E. - Nazareno, L. - Summanwar, A. - Foret, František - Řemínek, Roman
Miniaturized nanoelectrospray interface for coupling capillary electrophoresis with mass spectrometry detection.
Electrophoresis. JUL (2024). ISSN 0173-0835. E-ISSN 1522-2683
R&D Projects: GA TA ČR(CZ) TO01000232; GA ČR(CZ) GA24-11335J
Institutional support: RVO:68081715
Keywords : capillary electrophoresis * electrospray ionization * mass spectrometry * microfabrication * proteomics
OECD category: Analytical chemistry
Impact factor: 3, year: 2023
Method of publishing: Open access
https://analyticalsciencejournals.onlinelibrary.wiley.com/doi/epdf/10.1002/elps.202400090
Permanent Link: https://hdl.handle.net/11104/0355605File Download Size Commentary Version Access 0597794.pdf 0 5.4 MB Author’s postprint require - 3.0588429 - ÚIACH 2025 RIV CH eng J - Journal Article
Šťastná, Miroslava
The Role of Proteomics in Identification of Key Proteins of Bacterial Cells with Focus on Probiotic Bacteria.
International Journal of Molecular Sciences. Roč. 25, č. 16 (2024), č. článku 8564. ISSN 1661-6596. E-ISSN 1422-0067
R&D Projects: GA ČR(CZ) GA23-04703S
Institutional support: RVO:68081715
Keywords : bacterial proteins * probiotics * mass spectrometry-based proteomics * health-promoting effect
OECD category: Analytical chemistry
Impact factor: 4.9, year: 2023
Method of publishing: Open access
https://www.mdpi.com/1422-0067/25/16/8564
Permanent Link: https://hdl.handle.net/11104/0355335File Download Size Commentary Version Access 0588429.pdf 1 5.4 MB Publisher’s postprint require - 4.0585850 - MBÚ 2025 RIV CH eng J - Journal Article
Zavala-Meneses, Sofía Guadalupe - Firrincieli, A. - Chalová, P. - Pajer, P. - Checcucci, A. - Škultéty, L'udovít - Cappelletti, M.
Proteogenomic Characterization of Pseudomonas veronii SM-20 Growing on Phenanthrene as Only Carbon and Energy Source.
Microorganisms. Roč. 12, č. 4 (2024), č. článku 753. ISSN 2076-2607. E-ISSN 2076-2607
R&D Projects: GA ČR(CZ) GA17-23794S
Institutional support: RVO:61388971
Keywords : polycyclic aromatic-hydrocarbons * subcellular-localization * ferripyoverdine receptor * metabolic pathway * degradation * strains * soil * 1,2-dioxygenase * dioxygenases * performance * Pseudomonas * biodegradation * polycyclic aromatic hydrocarbons (PAHs) * phenanthrene (PHE) * proteomics * genomics
OECD category: Microbiology
Impact factor: 4.1, year: 2023
Method of publishing: Open access
https://www.mdpi.com/2076-2607/12/4/753
Permanent Link: https://hdl.handle.net/11104/0353531 - 5.0585513 - MBÚ 2025 RIV US eng J - Journal Article
Zákopčaník, Marek - Kavan, Daniel - Novák, Petr - Loginov, Dmitry Sergej
Quantifying the Impact of the Peptide Identification Framework on the Results of Fast Photochemical Oxidation of Protein Analysis.
Journal of Proteome Research. Roč. 23, č. 2 (2023), s. 609-617. ISSN 1535-3893. E-ISSN 1535-3907
R&D Projects: GA ČR(CZ) GA22-27695S
EU Projects: European Commission(XE) 823839 - EPIC-XS
Institutional support: RVO:61388971
Keywords : mass-spectrometry * exchange * fpop * searchengine * structural proteomics
OECD category: Microbiology
Impact factor: 3.8, year: 2023
Method of publishing: Open access
https://pubs.acs.org/doi/10.1021/acs.jproteome.3c00390
Permanent Link: https://hdl.handle.net/11104/0353197 - 6.0583729 - ÚIACH 2025 RIV GB eng J - Journal Article
Šťastná, Miroslava
Post-translational modifications of proteins in cardiovascular diseases examined by proteomic approaches.
FEBS Journal. Roč. 291, č. 5 (2024), s. 1-19. ISSN 1742-464X. E-ISSN 1742-4658
R&D Projects: GA ČR(CZ) GA23-04703S
Institutional support: RVO:68081715
Keywords : cardiovascular disease * MS-based proteomics * post-translational modifications * proteins
OECD category: Analytical chemistry
Impact factor: 5.5, year: 2023
Method of publishing: Open access
https://febs.onlinelibrary.wiley.com/doi/10.1111/febs.17108
Permanent Link: https://hdl.handle.net/11104/0351727File Download Size Commentary Version Access 0583729.pdf 1 1.8 MB Publisher’s postprint require - 7.0583029 - MBÚ 2024 RIV US eng J - Journal Article
Zákopčaník, Marek - Kavan, Daniel - Novák, Petr - Loginov, Dmitry Sergej
Quantifying the Impact of the Peptide Identification Framework on the Results of Fast Photochemical Oxidation of Protein Analysis.
Journal of Proteome Research. Roč. 23, č. 2 (2023), s. 609-617. ISSN 1535-3893. E-ISSN 1535-3907
EU Projects: European Commission(XE) 823839 - EPIC-XS
Institutional support: RVO:61388971
Keywords : mass-spectrometry * exchange * fpop * searchengine * structural proteomics
OECD category: Microbiology
Impact factor: 3.8, year: 2023
Method of publishing: Open access
https://pubs.acs.org/doi/10.1021/acs.jproteome.3c00390
Permanent Link: https://hdl.handle.net/11104/0351128 - 8.0582102 - FGÚ 2025 RIV NL eng J - Journal Article
Brůžek, J. - Mikšík, I. - Kotěrová Pilmann, A. - Morvan, Marine - Kaupová Drtikolová, S. - Santos, F. - Danielisová, Alžběta - Zazvonilová, Eliška - Maureille, B. - Velemínský, P.
Undertaking the biological sex assessment of human remains: The applicability of minimally-invasive methods for proteomic sex estimation from enamel peptides.
Journal of Cultural Heritage. Roč. 66, March–April (2024), s. 204-214. ISSN 1296-2074. E-ISSN 1778-3674
Institutional support: RVO:67985823 ; RVO:67985912
Keywords : human skeletal collections * cultural heritage * proteomics * sex estimation * sampling
OECD category: Analytical chemistry; Archaeology (ARU-G)
Impact factor: 3.5, year: 2023
https://doi.org/10.1016/j.culher.2023.11.021
Permanent Link: https://hdl.handle.net/11104/0351192 - 9.0580699 - ÚEM 2024 RIV CH eng J - Journal Article
Geci, I. - Bober, P. - Filová, Eva - Amler, Evžen - Sabo, J.
The Role of ARHGAP1 in Rho GTPase Inactivation during Metastasizing of Breast Cancer Cell Line MCF-7 after Treatment with Doxorubicin.
International Journal of Molecular Sciences. Roč. 24, č. 14 (2023), č. článku 11352. ISSN 1661-6596. E-ISSN 1422-0067
Institutional support: RVO:68378041
Keywords : proteomics * mass spectrometry * cell adhesion * breast cancer * doxorubicin * metastases
OECD category: Biology (theoretical, mathematical, thermal, cryobiology, biological rhythm), Evolutionary biology
Impact factor: 4.9, year: 2023
Method of publishing: Open access
https://www.mdpi.com/1422-0067/24/14/11352
Permanent Link: https://hdl.handle.net/11104/0351157 - 10.0580617 - ÚOCHB 2025 RIV US eng J - Journal Article
Bouyssié, D. - Altiner, P. - Capella-Gutierrez, S. - Fernandez, J. M. - Hagemeijer, Y. P. - Horvatovich, P. - Hubálek, Martin - Levander, F. - Mauri, P. - Palmblad, M. - Raffelsberger, W. - Rodriguez-Navas, L. - Di Silvestre, D. - Kunkli, B. T. - Uszkoreit, J. - Vandenbrouck, Y. - Vizcaíno, J. A. - Winkelhardt, D. - Schwämmle, V.
WOMBAT-P: Benchmarking Label-Free Proteomics Data Analysis Workflows.
Journal of Proteome Research. Roč. 23, č. 1 (2024), s. 418-429. ISSN 1535-3893. E-ISSN 1535-3907
Institutional support: RVO:61388963
Keywords : workflow * data analysis * benchmarking * label-free proteomics * quality metrics
OECD category: Analytical chemistry
Impact factor: 3.8, year: 2023
Method of publishing: Limited access
https://doi.org/10.1021/acs.jproteome.3c00636
Permanent Link: https://hdl.handle.net/11104/0349387
Research data: CRAN