Search results
- 1.0585850 - MBÚ 2025 RIV CH eng J - Journal Article
Zavala-Meneses, Sofía Guadalupe - Firrincieli, A. - Chalová, P. - Pajer, P. - Checcucci, A. - Škultéty, L'udovít - Cappelletti, M.
Proteogenomic Characterization of Pseudomonas veronii SM-20 Growing on Phenanthrene as Only Carbon and Energy Source.
Microorganisms. Roč. 12, č. 4 (2024), č. článku 753. E-ISSN 2076-2607
Institutional support: RVO:61388971
Keywords : polycyclic aromatic-hydrocarbons * subcellular-localization * ferripyoverdine receptor * metabolic pathway * degradation * strains * soil * 1,2-dioxygenase * dioxygenases * performance * Pseudomonas * biodegradation * polycyclic aromatic hydrocarbons (PAHs) * phenanthrene (PHE) * proteomics * genomics
OECD category: Microbiology
Impact factor: 4.5, year: 2022
Method of publishing: Open access
https://www.mdpi.com/2076-2607/12/4/753
Permanent Link: https://hdl.handle.net/11104/0353531 - 2.0585781 - ÚBO 2025 RIV NL eng J - Journal Article
Ilík, Vladislav - Schwarz, E. M. - Nosková, Eva - Pafčo, Barbora
Hookworm genomics: dusk or dawn?
Trends in Parasitology. (2024). ISSN 1471-4922. E-ISSN 1471-5007
R&D Projects: GA ČR(CZ) GA22-16475S
Institutional support: RVO:68081766
Keywords : Ancylostoma * genome * genomics * hookworms * Necator * sequencing
OECD category: Ecology
Impact factor: 9.6, year: 2022
https://www.sciencedirect.com/science/article/pii/S1471492224000850?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0353465 - 3.0585458 - MBÚ 2025 RIV DE eng J - Journal Article
Hyde, K. D. - Baldrian, Petr - Chen, Y. - Chethana, K. W. T. - de Hoog, S. - Doilom, M. - Gomes de Farias, A. R. - Goncalves, M. F. M. - Gonkhom, D. - Gui, H. - Hilario, S. - Hu, Y. - Jayawardena, R. S. - Khyaju, S. - Kirk, P. M. - Kohout, Petr - Luangharn, T. - Maharachchikumbura, S. S. N. - Manawasinghe, Ishara S. - Mortimer, P. E. - Niego, A. G. T. - Phonemany, M. - Sandargo, B. - Senanayake, I. C. - Stadler, M. - Surup, F. - Thongklang, N. - Wanasinghe, D. N. - Bahkali, A. H. - Walker, A.
Current trends, limitations and future research in the fungi?
Fungal Diversity. Roč. 125, č. 1 (2024), s. 1-71. ISSN 1560-2745. E-ISSN 1878-9129
R&D Projects: GA MŠMT(CZ) LUC23152
Institutional support: RVO:61388971
Keywords : arbuscular mycorrhizal fungi * silver nanoparticles * endophytic fungi * plant-pathogens * agaricus-bisporus * green synthesis * genome-scale * karnal-bunt * phylogenetic contributions * submerged fermentation * amf * Biocircular economy * Biocontrol * Data repositories * Drug discovery * Ecology * Emerging diseases * Functional genomics * Fungal classification * hts * Machine learning * Mycoremediation * Nanotechnology * Novel compounds * Phylogenomics * Plant pathology * Species numbers
OECD category: Microbiology
Impact factor: 20.3, year: 2022
Method of publishing: Open access
https://link.springer.com/article/10.1007/s13225-023-00532-5
Permanent Link: https://hdl.handle.net/11104/0353372 - 4.0585310 - MBÚ 2024 RIV CZ eng J - Journal Article
Černý, V. - Hrdý, J. - Beneš, J. - Tlaskalová-Hogenová, Helena
A word on the microbiome: considerations about the history, current state, and terminology of an emerging discipline.
Epidemiologie, Mikrobiologie, Imunologie. Roč. 72, č. 2 (2023), s. 112-118. ISSN 1210-7913
R&D Projects: GA MZd(CZ) NU20-05-00038; GA MZd(CZ) NU20-04-00077; GA MZd(CZ) NV19-03-00179; GA ČR(CZ) GA20-03997S
Institutional support: RVO:61388971
Keywords : germ-free * autoimmune-diseases * mucosal barrier * mice * bacteria * genomics * microbiota * organoids * bioinformatic methods * microbiome
OECD category: Immunology
Impact factor: 0.5, year: 2022
Method of publishing: Limited access
https://www.prolekare.cz/casopisy/epidemiologie/2023-2-15/slovo-o-mikrobiomu-uvaha-nad-historii-soucasnym-stavem-a-pojmoslovim-vzkvetajiciho-oboru-134705
Permanent Link: https://hdl.handle.net/11104/0353020 - 5.0585078 - MBÚ 2025 RIV US eng J - Journal Article
Saati-Santamaria, Zaki - Flores-Felix, J. D. - Igual, J. M. - Velazquez, E. - Garcia-Fraile, P. - Martinez-Molina, E.
Speciation Features of Ferdinandcohnia quinoae sp. nov to Adapt to the Plant Host.
Journal of Molecular Evolution. Roč. 92, č. 2 (2024), s. 169-180. ISSN 0022-2844. E-ISSN 1432-1432
Institutional support: RVO:61388971
Keywords : proposed minimal standards * genome sequence * quality * Speciation * Ferdinandcohnia quinoae * Quinoa * Adaptation * Comparative genomics * Microbial ecology
OECD category: Microbiology
Impact factor: 3.9, year: 2022
Method of publishing: Open access
https://link.springer.com/article/10.1007/s00239-024-10164-1
Permanent Link: https://hdl.handle.net/11104/0353071 - 6.0584928 - ARÚ 2025 CZ eng A - Abstract
Novák, K. - Janák, Vojtěch - Kyselý, René
Addressing the history of a local cattle breed.
Congress of the European Society for Evolutionary Biology, Prague, August 14-19, 2022. Book of Abstracts. Prague: ESEB, 2022. s. 275-276.
[Congress of the European Society for Evolutionary Biology. 14.08.2022-19.08.2022, Prague]
Institutional support: RVO:67985912
Keywords : genomics * archaeogenetics * native breeds * Czech Red cattle * phylogeography
OECD category: Archaeology
Permanent Link: https://hdl.handle.net/11104/0352707 - 7.0583694 - ÚMG 2025 GB eng J - Journal Article
Kvapilová, K. - Misenko, P. - Radvanszky, J. - Brzon, O. - Budis, J. - Gazdarica, J. - Pos, O. - Korabecna, M. - Kašný, M. - Szemes, T. - Kvapil, P. - Pačes, Jan - Kozmik, Zbyněk
Validated WGS and WES protocols proved saliva-derived gDNA as an equivalent to blood-derived gDNA for clinical and population genomic analyses.
BMC Genomics. Roč. 25, č. 1 (2024), č. článku 187. ISSN 1471-2164. E-ISSN 1471-2164
Institutional support: RVO:68378050
Keywords : Genomics variant analysis * Saliva-derived gDNA * Whole genome sequencing * Whole exome sequencing * Validation guideline
OECD category: Biochemistry and molecular biology
Impact factor: 4.4, year: 2022
Method of publishing: Open access
https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-024-10080-0
Permanent Link: https://hdl.handle.net/11104/0352871 - 8.0580816 - MBÚ 2025 RIV DE eng J - Journal Article
Cedeno-Sanchez, M. - Cheng, T. - Lambert, C. - Kolařík, Miroslav - Kuhnert, E. - Cox, R. J. - Kalinowski, J. - Verwaaijen, B. - Stadler, M.
Unraveling intragenomic polymorphisms in the high-quality genome of Hypoxylaceae: a comprehensive study of the rDNA cistron.
Mycological Progress. Roč. 23, č. 1 (2024), č. článku 5. ISSN 1617-416X. E-ISSN 1861-8952
EU Projects: European Commission(CZ) 101008129 - MYCOBIOMICS
Institutional support: RVO:61388971
Keywords : internal transcribed spacer * molecular phylogeny * identification * alignment * region * dna * Barcoding * Genomics * Phylogeny * Sanger sequencing * Xylariales
OECD category: Microbiology
Impact factor: 2.4, year: 2022
Method of publishing: Open access
https://link.springer.com/article/10.1007/s11557-023-01940-2
Permanent Link: https://hdl.handle.net/11104/0349581 - 9.0580696 - BC 2024 RIV GB eng J - Journal Article
Dacks, Joel Bryan - Ginger, M. L.
Two decades taken at speed: genomics, cell biology, ecology, and evolution of protists.
BMC BIOLOGY. Roč. 21, č. 1 (2023), č. článku 283. E-ISSN 1741-7007
Institutional support: RVO:60077344
Keywords : Evolutionary protistology * genomics * cell biology
OECD category: Microbiology
Impact factor: 5.4, year: 2022
Method of publishing: Open access
https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-023-01787-9
Permanent Link: https://hdl.handle.net/11104/0349457 - 10.0578987 - MBÚ 2024 RIV US eng J - Journal Article
Saati-Santamaria, Zaki - Baroncelli, R. - Rivas, R. - Garcia-Fraile, P.
Comparative Genomics of the Genus Pseudomonas Reveals Host- and Environment-Specific Evolution.
Microbiology Spectrum. Roč. 10, č. 6 (2022), č. článku 02370-22. ISSN 2165-0497. E-ISSN 2165-0497
Institutional support: RVO:61388971
Keywords : adaptation * bacteria * sequence * Pseudomonas * environmental microbiology * genomics * host-cell interactions * microbial ecology
OECD category: Microbiology
Impact factor: 3.7, year: 2022
Method of publishing: Open access
https://journals.asm.org/doi/10.1128/spectrum.02370-22
Permanent Link: https://hdl.handle.net/11104/0347873