Search results
- 1.0585078 - MBÚ 2025 RIV US eng J - Journal Article
Saati-Santamaria, Zaki - Flores-Felix, J. D. - Igual, J. M. - Velazquez, E. - Garcia-Fraile, P. - Martinez-Molina, E.
Speciation Features of Ferdinandcohnia quinoae sp. nov to Adapt to the Plant Host.
Journal of Molecular Evolution. Roč. 92, č. 2 (2024), s. 169-180. ISSN 0022-2844. E-ISSN 1432-1432
Institutional support: RVO:61388971
Keywords : proposed minimal standards * genome sequence * quality * Speciation * Ferdinandcohnia quinoae * Quinoa * Adaptation * Comparative genomics * Microbial ecology
OECD category: Microbiology
Impact factor: 3.9, year: 2022
Method of publishing: Open access
https://link.springer.com/article/10.1007/s00239-024-10164-1
Permanent Link: https://hdl.handle.net/11104/0353071 - 2.0575162 - BC 2024 RIV NL eng J - Journal Article
Huang, J. - Chen, M. - He, Y. - Chen, H. - Huang, M. - Li, N. - Ryan, U. - Kváč, Martin - Feng, Y. - Xiao, L. - Guo, Y.
Cryptosporidium equi n. sp. (Apicomplexa: Cryptosporidiidae): Biological and genetic characterisations.
International Journal for Parasitology. Roč. 53, č. 10 (2023), s. 545-554. ISSN 0020-7519. E-ISSN 1879-0135
Institutional support: RVO:60077344
Keywords : Cryptosporidium horse genotype * Cryptosporidium equi * Comparative genomics * New species * Taxonomy
OECD category: Virology
Impact factor: 4, year: 2022
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/pii/S0020751923000917?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0345306 - 3.0574496 - BC 2024 RIV US eng J - Journal Article
Záhonová, Kristýna - Low, R. S. - Warren, C.J. - Cantoni, D. - Herman, E.K. - Yiangou, L. - Ribeiro, C.A. - Phanprasert, Y. - Brown, I.R. - Rueckert, S. - Baker, N.L. - Tachezy, J. - Betts, E.L. - Gentekaki, E. - van der Giezen, M. - Clark, C.G. - Jackson, A.P. - Dacks, Joel Bryan - Tsaousis, A.D.
Evolutionary analysis of cellular reduction and anaerobicity in the hyper-prevalent gut microbe Blastocystis.
Current Biology. Roč. 33, č. 12 (2023), s. 2449-+. ISSN 0960-9822. E-ISSN 1879-0445
Institutional support: RVO:60077344
Keywords : peroxisome * comparative genomics * flagella
OECD category: Biochemistry and molecular biology
Impact factor: 9.2, year: 2022
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S0960982223006206?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0345307 - 4.0570576 - BC 2023 RIV US eng M - Monography Chapter
Barlow, L.D. - Maciejowski, W. - More, K. - Terry, K. - Vargová, R. - Záhonová, Kristýna - Dacks, J.B.
Comparative Genomics for Evolutionary Cell Biology Using AMOEBAE: Understanding the Golgi and Beyond.
Golgi. Vol. 2557. New York: Humana, 2022 - (Wang, Y.; Lupashin, V.; Graham, T.), s. 431-452. Methods in Molecular Biology, XVII. ISBN 978-1-0716-2638-2
Institutional support: RVO:60077344
Keywords : Adaptin * Basidiomycete * blast * Comparative genomics * Computational pipeline * Evolutionary Cell Biology * Golgi * Homology searching * Molecular evolution * Workflow
OECD category: Genetics and heredity (medical genetics to be 3)
https://link.springer.com/protocol/10.1007/978-1-0716-2639-9_26
Permanent Link: https://hdl.handle.net/11104/0341877 - 5.0568054 - BC 2023 RIV DK eng J - Journal Article
Kontou, A. - Herman, E.K. - Field, Mark Christian - Dacks, Joel Bryan - Koumandou, V.L.
Evolution of factors shaping the endoplasmic reticulum.
Traffic. Roč. 23, č. 9 (2022), s. 462-473. ISSN 1398-9219. E-ISSN 1600-0854
EU Projects: Wellcome Trust(GB) 204697/Z/16/Z
Institutional support: RVO:60077344
Keywords : comparative genomics * endomembrane system * endoplasmic reticulum * eukaryogenesis * evolution * last eukaryotic common ancestor * phylogeny * reticulons * vesicular traffic
OECD category: Cell biology
Impact factor: 4.5, year: 2022
Method of publishing: Limited access
https://onlinelibrary.wiley.com/doi/10.1111/tra.12863
Permanent Link: https://hdl.handle.net/11104/0339397 - 6.0561629 - BC 2023 RIV DK eng O - Others
Kontou, A. - Herman, E.K. - Field, Mark Christian - Dacks, Joel Bryan - Koumandou, V.L.
Correction: Evolution of factors shaping the endoplasmic reticulum, Traffic: Volume 23, Issue 10, Pages 521–522, October 2022, DOI: 10.1111/tra.12867 / WOS: 000854894500005 / PubMed: 36116901 / Scopus: 85138196796
ke článku: Evolution of factors shaping the endoplasmic reticulum, Traffic: Volume 23, Issue 9, Pages 462-473, September 2022, DOI: 10.1111/tra.12863 / WOS: 000847520900004 / PubMed: 36040076 / Scopus: 85136184288
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2022. Traffic. Wiley. Roč. 23, č. 10 (2022), s. 521-521. ISSN 1398-9219. E-ISSN 1600-0854
EU Projects: Wellcome Trust(GB) 204697/Z/16/Z
Institutional support: RVO:60077344
Keywords : comparative genomics * endomembrane system * endoplasmic reticulum * evolution
OECD category: Cell biology
https://onlinelibrary.wiley.com/doi/10.1111/tra.12867
Permanent Link: https://hdl.handle.net/11104/0339396 - 7.0559181 - BC 2023 RIV US eng J - Journal Article
Marian, I.M. - Vonk, P.J. - Valdes, I.D. - Barry, K. - Bostock, B. - Carver, A. - Daum, C. - Lerner, H. - Lipzen, A. - Park, Hongjae - Schuller, M.B.P. - Tegelaar, M. - Tritt, A. - Schmutz, J. - Grimwood, J. - Lugones, L.G. - Choi, I.G. - Wösten, H.A.B. - Grigoriev, I.V. - Ohm, R.A.
The transcription factor Roc1 is a key regulator of cellulose degradation in the wood-decaying mushroom Schizophyllum commune.
mBio. Roč. 13, č. 3 (2022), č. článku 00628-22. ISSN 2161-2129. E-ISSN 2150-7511
Institutional support: RVO:60077344
Keywords : ChIP-Seq * comparative genomics * comparative transcriptomics * fungi * gene regulation * lignocellulose degradation
OECD category: Mycology
Impact factor: 6.4, year: 2022
Method of publishing: Open access
https://doi.org/10.1128/mbio.00628-22
Permanent Link: https://hdl.handle.net/11104/0340417 - 8.0555921 - BC 2023 RIV GB eng J - Journal Article
Wu, G. - Miyauchi, S. - Morin, E. - Kuo, A. - Drula, E. - Varga, A. - Kohler, A. - Feng, B. - Cao, Y. - Lipzen, A. - Daum, C. - Hundley, H. - Pangilinan, J. - Johnson, J. - Barry, K. - LaButti, K. - Ng, V. - Ahrendt, S. - Min, B. - Choi, I.G. - Park, Hongjae - Plett, J.M. - Magnuson, J. - Spatafora, J.W. - Nagy, L.G. - Henrissat, B. - Grigoriev, I.V. - Yang, Z. L. - Xu, J. - Martin, F.M.
Evolutionary innovations through gain and loss of genes in the ectomycorrhizal Boletales.
New Phytologist. Roč. 233, č. 3 (2022), s. 1383-1400. ISSN 0028-646X. E-ISSN 1469-8137
Institutional support: RVO:60077344
Keywords : r/bioconductor package * phylogenetic analysis * host-specificity * diversity * Boletales * brown-rot fungi * CAZymes * comparative genomics * ectomycorrhizal fungi * trait evolution
OECD category: Mycology
Impact factor: 9.4, year: 2022
Method of publishing: Open access
https://doi.org/10.1111/nph.17858
Permanent Link: https://hdl.handle.net/11104/0340415 - 9.0554489 - BC 2022 RIV AU eng J - Journal Article
Pipaliya, S. - Thompson, L.A. - Dacks, Joel Bryan
The reduced ARF regulatory system in Giardia intestinalis pre-dates the transition to parasitism in the lineage Fornicata.
International Journal for Parasitology. Roč. 51, č. 10 (2021), s. 825-839. ISSN 0020-7519. E-ISSN 1879-0135
Institutional support: RVO:60077344
Keywords : gtpase-activating protein * exchange factor * endoplasmic-reticulum * n. sp. * golgi * ultrastructure * trafficking * endosome * family * roles * ARF GTPase regulatory system * Giardia * Fornicata * Diplomonads * Membrane trafficking * Comparative genomics
OECD category: Parasitology
Impact factor: 4.330, year: 2021
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/pii/S0020751921001223?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0329204 - 10.0554438 - BC 2022 RIV US eng J - Journal Article
Padilla-Mejia, N.E. - Makarov, A.A. - Barlow, L.D. - Butterfield, E. - Field, Mark Christian
Evolution and diversification of the nuclear envelope.
Nucleus. Roč. 12, č. 1 (2021), s. 21-41. ISSN 1949-1034. E-ISSN 1949-1042
EU Projects: Wellcome Trust(GB) 204697/Z/16/Z
Institutional support: RVO:60077344
Keywords : lamin b-receptor * multiple sequence alignment * transmembrane protein * comparative genomics * membrane-trafficking * diabetes-mellitus * tumor-suppressor * optic atrophy * ribosomal-rna * pore complex * Nuclear envelope * heterochromatin * lamina * proteome * evolution * eukaryogenesis
OECD category: Cell biology
Impact factor: 4.590, year: 2021
Method of publishing: Open access
https://www.tandfonline.com/doi/full/10.1080/19491034.2021.1874135
Permanent Link: http://hdl.handle.net/11104/0329147