Search results
- 1.0574950 - BFÚ 2024 RIV US eng J - Journal Article
Qiu, D. - Cheng, M. - Stadlbauer, Petr - Chen, J. - Langer, M. - Zhang, X. - Gao, Q. - Ju, H. - Šponer, Jiří - Mergny, Jean-Louis - Monchaud, D. - Zhou, J.
Topology of DNA G-Quadruplexes Can Be Harnessed in Holliday Junction-Based DNA Suprastructures to Control and Optimize Their Biocatalytic Properties.
ACS Catalysis. Roč. 13, č. 16 (2023), s. 10722-10733. ISSN 2155-5435. E-ISSN 2155-5435
R&D Projects: GA MŠMT EF15_003/0000477; GA ČR(CZ) GA21-23718S
Institutional support: RVO:68081707
Keywords : G-quadruplex * DNAzyme * Holliday junction * molecular dynamics simulations * catalytic mechanism
OECD category: Physical chemistry
Impact factor: 12.9, year: 2022
Method of publishing: Open access
https://pubs.acs.org/doi/10.1021/acscatal.3c02818
Permanent Link: https://hdl.handle.net/11104/0349523 - 2.0571673 - MBÚ 2024 RIV GB eng J - Journal Article
Pacheco-Garcia, J. L. - Anoz-Carbonell, E. - Loginov, Dmitry Sergej - Kavan, Daniel - Salido, E. - Man, Petr - Medina, M. - Pey, A. L.
Counterintuitive structural and functional effects due to naturally occurring mutations targeting the active site of the disease-associated NQO1 enzyme.
FEBS Journal. Roč. 290, č. 7 (2023), s. 1855-1873. ISSN 1742-464X. E-ISSN 1742-4658
R&D Projects: GA MŠMT(CZ) ED1.1.00/02.0109
EU Projects: European Commission(XE) 731077 - EU_FT-ICR_MS
Research Infrastructure: CIISB II - 90127
Institutional support: RVO:61388971
Keywords : catalytic mechanism * genotype-phenotype correlations * protein structure-function * structural stability
OECD category: Biochemistry and molecular biology
Impact factor: 5.4, year: 2022
Method of publishing: Open access
https://febs.onlinelibrary.wiley.com/doi/10.1111/febs.16677
Permanent Link: https://hdl.handle.net/11104/0343503 - 3.0540276 - ÚMG 2021 RIV GB eng J - Journal Article
Pachl, P. - Kapešová, J. - Brynda, Jiří - Biedermannova, L. - Pelantová, H. - Bojarová, P. - Křen, V. - Řezáčová, Pavlína - Kotik, M.
Rutinosidase from Aspergillus niger: crystal structure and insight into the enzymatic activity.
FEBS Journal. Roč. 287, č. 15 (2020), s. 3315-3327. ISSN 1742-464X. E-ISSN 1742-4658
Institutional support: RVO:68378050
Keywords : catalytic mechanism * diglycosidase * rutin * siras * X-ray crystallography
OECD category: Biochemistry and molecular biology
Impact factor: 5.542, year: 2020
Method of publishing: Limited access
https://febs.onlinelibrary.wiley.com/doi/abs/10.1111/febs.15208
Permanent Link: http://hdl.handle.net/11104/0317970 - 4.0521889 - ÚOCHB 2021 RIV GB eng J - Journal Article
Pachl, Petr - Kapešová, Jana - Brynda, Jiří - Biedermannová, Lada - Pelantová, Helena - Bojarová, Pavla - Křen, Vladimír - Řezáčová, Pavlína - Kotík, Michael
Rutinosidase from Aspergillus niger: crystal structure and insight into the enzymatic activity.
FEBS Journal. Roč. 287, č. 15 (2020), s. 3315-3327. ISSN 1742-464X. E-ISSN 1742-4658
R&D Projects: GA ČR(CZ) GA19-00091S; GA MŠMT(CZ) EF16_019/0000729
Institutional support: RVO:61388963 ; RVO:61388971 ; RVO:86652036
Keywords : catalytic mechanism * diglycosidase * rutin * SIRAS * X-ray crystallography
OECD category: Biochemistry and molecular biology; Biophysics (MBU-M)
Impact factor: 5.542, year: 2020
Method of publishing: Limited access
https://febs.onlinelibrary.wiley.com/doi/full/10.1111/febs.15208
Permanent Link: http://hdl.handle.net/11104/0306434 - 5.0500166 - MBÚ 2019 RIV US eng J - Journal Article
Kokkonen, P. - Sýkora, J. - Prokop, Z. - Ghose, Avisek - Bednář, D. - Amaro, M. - Beerens, K. - Bidmanová, Š. - Slanská, M. - Březovský, J. - Dambrovský, J. - Hof, M.
Molecular Gating of an Engineered Enzyme Captured in Real Time.
Journal of the American Chemical Society. Roč. 140, č. 51 (2018), s. 17999-18008. ISSN 0002-7863. E-ISSN 1520-5126
R&D Projects: GA MŠMT(CZ) LM2015055; GA MŠMT(CZ) LM2015047
Institutional support: RVO:61388971
Keywords : photoinduced electron-transfer * conformational dynamics * catalytic mechanism
OECD category: Biochemistry and molecular biology
Impact factor: 14.695, year: 2018
Permanent Link: http://hdl.handle.net/11104/0292296 - 6.0460095 - MBÚ 2017 RIV US eng J - Journal Article
Archelas, A. - Zhao, W. - Faure, B. - Iacazio, G. - Kotík, Michael
Epoxide hydrolase-catalyzed enantioselective conversion of trans-stilbene oxide: Insights into the reaction mechanism from steady-state and pre-steady-state enzyme kinetics.
Archives of Biochemistry and Biophysics. Roč. 591, FEB 2016 (2016), s. 66-75. ISSN 0003-9861. E-ISSN 1096-0384
Institutional support: RVO:61388971
Keywords : Catalytic mechanism * Epoxide hydrolase * Electrophilic catalysis
Subject RIV: CE - Biochemistry
Impact factor: 3.165, year: 2016
Permanent Link: http://hdl.handle.net/11104/0260235 - 7.0323266 - BFÚ 2009 RIV US eng J - Journal Article
Ditzler, M.A. - Šponer, Jiří - Walter, N.G.
Molecular dynamics suggest multifunctionality of an adenine imino group in acid-base catalysis of the hairpin ribozyme.
[Molekulová dynamika ukazuje na multifunkčnost imino skupiny adeninu v katalýze kyselé báze hairpin ribozymu.]
RNA. Roč. 15, č. 4 (2009), s. 560-575. ISSN 1355-8382. E-ISSN 1469-9001
R&D Projects: GA AV ČR(CZ) IAA400040802
Institutional research plan: CEZ:AV0Z50040507; CEZ:AV0Z50040702
Keywords : molecular dynamics * ribozyme * catalytic mechanism
Subject RIV: BO - Biophysics
Impact factor: 5.198, year: 2009
Permanent Link: http://hdl.handle.net/11104/0171274