Search results

  1. 1.
    0541895 - ÚOCHB 2022 RIV US eng J - Journal Article
    Wosicki, S. - Kazmierczyk, M. - Gilski, M. - Zábranská, Helena - Pichová, Iva - Jaskolski, M.
    Crystal structures of inhibitor complexes of M‐PMV protease with visible flap loops.
    Protein Science. Roč. 30, č. 6 (2021), s. 1258-1263. ISSN 0961-8368. E-ISSN 1469-896X
    Institutional support: RVO:61388963
    Keywords : active site architecture * aspartic protease * dimer * flap structure * inhibitor * Mason‐Pfizer monkey virus * M-PMV * retropepsin * retrovirus
    OBOR OECD: Biochemistry and molecular biology
    Impact factor: 6.725, year: 2020
    https://doi.org/10.1002/pro.4072
    Permanent Link: http://hdl.handle.net/11104/0319391
     
  2. 2.
    0523219 - BTÚ 2020 cze C - Conference Paper (international conference)
    Švecová, Leona - Koval, Tomáš - Skálová, Tereza - Ostergaard, L. H. - Dohnálek, Jan
    Krystalová struktura Bilirubin oxidázy z Myrothecium verrucaria s ligandem v aktivním místě.
    Sborník Páté Studentské vědecké konference fyziky pevných látek FJFI ČVUT. Praha: ȃeské vysoké učení technické v Praze, 2015 - (Aubrecht, J.), s. 28-32. ISBN 978-80-01-05842-8.
    [Sborník Páté Studentské vědecké konference fyziky pevných látek FJFI ČVUT. Nové Hrady (CZ), 14.09.2015-19.09.2015]
    Institutional support: RVO:86652036
    Keywords : crystal structure * enzyme * active site
    Subject RIV: CE - Biochemistry
    OBOR OECD: Biochemistry and molecular biology
    Permanent Link: http://hdl.handle.net/11104/0307596
     
  3. 3.
    0523191 - BTÚ 2020 cze C - Conference Paper (international conference)
    Stránský, Jan - Dohnálek, Jan
    Zanedbávaný parametr difrakčního experimentu: expoziční čas.
    Sborník Páté Studentské vědecké konference fyziky pevných látek FJFI ČVUT. Praha: ȃeské vysoké učení technické v Praze, 2015 - (Aubrecht, J.), s. 28-32. ISBN 978-80-01-05842-8.
    [Sborník Páté Studentské vědecké konference fyziky pevných látek FJFI ČVUT. Nové Hrady (CZ), 14.09.2015-19.09.2015]
    Institutional support: RVO:86652036
    Keywords : crystal structure * enzyme * active site
    Subject RIV: CE - Biochemistry
    OBOR OECD: Biochemistry and molecular biology
    Permanent Link: http://hdl.handle.net/11104/0307574
     
  4. 4.
    0520583 - BC 2020 RIV GB eng J - Journal Article
    Valdés, James J. - Miller, A. D.
    New opportunities for designing effective small interfering RNAs.
    Scientific Reports. Roč. 9, NOV 6 2019 (2019), č. článku 16146. ISSN 2045-2322. E-ISSN 2045-2322
    Institutional support: RVO:60077344
    Keywords : active-site * hepatitis-c * all-atom * protein * replication * exploration * inhibition * pseudoknot * expression * pele
    Subject RIV: EE - Microbiology, Virology
    OBOR OECD: Microbiology
    Impact factor: 3.998, year: 2019
    https://www.nature.com/articles/s41598-019-52303-5.pdf
    Permanent Link: http://hdl.handle.net/11104/0305239
     
  5. 5.
    0517405 - ÚOCHB 2020 RIV FR eng J - Journal Article
    Majerová, Taťána - Novotný, Pavel - Krýsová, Eliška - Konvalinka, Jan
    Exploiting the unique features of Zika and Dengue proteases for inhibitor design.
    Biochimie. Roč. 166, Nov (2019), s. 132-141. ISSN 0300-9084. E-ISSN 1638-6183
    R&D Projects: GA MŠk LO1302
    Institutional support: RVO:61388963
    Keywords : active-site inhibitors * allosteric inhibitors * aptamers * precursor * Dengue protease * Zika protease
    Subject RIV: CE - Biochemistry
    OBOR OECD: Biochemistry and molecular biology
    Impact factor: 3.413, year: 2019
    https://www.sciencedirect.com/science/article/abs/pii/S0300908419301439?via%3Dihub
    Permanent Link: http://hdl.handle.net/11104/0302990
     
  6. 6.
    0505699 - ÚFCH JH 2020 RIV US eng J - Journal Article
    Haessner, M. - Fiedler, Jan - Ringenberg, M. R.
    (Spectro)electrochemical and Electrocatalytic Investigation of 1,1 '-Dithiolatoferrocene-Hexacarbonyldiiron.
    Inorganic Chemistry. Roč. 58, č. 3 (2019), s. 1742-1745. ISSN 0020-1669. E-ISSN 1520-510X
    Institutional support: RVO:61388955
    Keywords : metal-metal bonds * proton-reduction * h-2 production * active-site * hydrogenase * models * complexes * carbonyl
    Subject RIV: CG - Electrochemistry
    OBOR OECD: Electrochemistry (dry cells, batteries, fuel cells, corrosion metals, electrolysis)
    Impact factor: 4.825, year: 2019
    http://hdl.handle.net/11104/0297111
    Permanent Link: http://hdl.handle.net/11104/0297111
    FileDownloadSizeCommentaryVersionAccess
    0505699.pdf61.2 MBPublisher’s postprintrequire
     
  7. 7.
    0495518 - BFÚ 2019 RIV GB eng J - Journal Article
    Krepl, Miroslav - Voegele, J. - Kruse, Holger - Duchardt-Ferner, E. - Woehnert, J. - Šponer, Jiří
    An intricate balance of hydrogen bonding, ion atmosphere and dynamics facilitates a seamless uracil to cytosine substitution in the U-turn of the neomycin-sensing riboswitch.
    Nucleic Acids Research. Roč. 46, č. 13 (2018), s. 6528-6543. ISSN 0305-1048. E-ISSN 1362-4962
    R&D Projects: GA ČR(CZ) GBP305/12/G034; GA MŠk EF15_003/0000477
    Institutional support: RVO:68081707
    Keywords : trna(asp) anticodon hairpin * amber force-field * stem-loop-v * molecular-dynamics * watson-crick * transfer-rna * nucleic-acids * active-site * base-pairs * rapid identification
    Subject RIV: CE - Biochemistry
    OBOR OECD: Biochemistry and molecular biology
    Impact factor: 11.147, year: 2018
    Permanent Link: http://hdl.handle.net/11104/0288484
     
  8. 8.
    0447582 - BFÚ 2016 RIV US eng J - Journal Article
    Dubecký, M. - Walter, Nils G. - Šponer, Jiří - Otyepka, M. - Banáš, Pavel
    Chemical Feasibility of the General Acid/Base Mechanism of glmS Ribozyme Self-Cleavage.
    Biopolymers. Roč. 103, č. 10 (2015), s. 550-562. ISSN 0006-3525. E-ISSN 1097-0282
    R&D Projects: GA MŠk(CZ) ED1.1.00/02.0068; GA ČR(CZ) GAP208/12/1878
    Institutional support: RVO:68081707
    Keywords : MOLECULAR-DYNAMICS SIMULATIONS * ACTIVE-SITE GUANINE * HAIRPIN RIBOZYME
    Subject RIV: BO - Biophysics
    Impact factor: 2.248, year: 2015
    Permanent Link: http://hdl.handle.net/11104/0249403
     
  9. 9.
    0431363 - ÚCHP 2015 CZ eng C - Conference Paper (international conference)
    Klusoň, Petr - Morozová, Magdalena - Krystyník, Pavel - Hejda, S. - Krýsa, J.
    The “Monkey Business” with Heterogeneous Photocatalysts.
    Final program. Prague: Orgit, 2014, s. 97. ISBN 978-80-02-02555-9.
    [International Congress of Chemical and Process Engineering /21./ - CHISA 2014 and Conference on Process Integration, Modelling and Optimisation for Energy Saving and Pollution Reduction /17./ - PRES 2014. Prague (CZ), 23.08.2014-27.08.2014]
    R&D Projects: GA TA ČR TA03010548
    Institutional support: RVO:67985858
    Keywords : dynamic active site * photocatalytic activity * case-study
    Subject RIV: CI - Industrial Chemistry, Chemical Engineering
    Permanent Link: http://hdl.handle.net/11104/0235916
    FileDownloadSizeCommentaryVersionAccess
    SKMBT_C22014090110382.pdf47282.1 KBPublisher’s postprintopen-access
     
  10. 10.
    0421950 - ÚOCHB 2014 RIV US eng J - Journal Article
    Hladílková, Jana - Prokop, Z. - Chaloupková, R. - Damborský, J. - Jungwirth, Pavel
    Release of Halide Ions from the Buried Active Site of the Haloalkane Dehalogenase LinB Revealed by Stopped-Flow Fluorescence Analysis and Free Energy Calculations.
    Journal of Physical Chemistry B. Roč. 117, č. 46 (2013), s. 14329-14335. ISSN 1520-6106. E-ISSN 1520-5207
    R&D Projects: GA ČR GBP208/12/G016
    Grant - others:GA ČR(CZ) GAP207/12/0775
    Program:GA
    Institutional support: RVO:61388963
    Keywords : access tunnel * buried active site * catalytic activity * enzyme mechanism * haloalkane dehalogenase * halide ions
    Subject RIV: CF - Physical ; Theoretical Chemistry
    Impact factor: 3.377, year: 2013
    Permanent Link: http://hdl.handle.net/11104/0228267