Search results
- 1.0570880 - ÚPT 2024 RIV GB eng J - Journal Article
Shamaei, Amirmohammad - Starčuková, Jana - Starčuk jr., Zenon
Physics-informed deep learning approach to quantification of human brain metabolites from magnetic resonance spectroscopy data.
Computers in Biology Medicine. Roč. 158, May (2023), č. článku 106837. ISSN 0010-4825. E-ISSN 1879-0534
R&D Projects: GA MŠMT(CZ) EF18_046/0016045; GA MŠMT(CZ) LM2018129; GA MŠMT(CZ) LM2023050
EU Projects: European Commission(XE) 813120 - INSPiRE-MED
Institutional support: RVO:68081731
Keywords : MR spectroscopy * Inverse problem * Deep learning * Machine learning * Convolutional neural network * Metabolite quantification
OECD category: Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)
Impact factor: 7.7, year: 2022
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S0010482523003025
Permanent Link: https://hdl.handle.net/11104/0342210File Download Size Commentary Version Access 2023_Shamaei_ComputersInBiologyMedicine.pdf 4 8.6 MB OA - CC BY 4.0 https://creativecommons.org/licenses/by/4.0/ Publisher’s postprint open-access
Research data: Zenodo - 2.0563909 - ÚPT 2023 RIV US eng J - Journal Article
Shamaei, Amirmohammad - Starčuková, Jana - Pavlova, Iveta - Starčuk jr., Zenon
Model-informed unsupervised deep learning approaches to frequency and phase correction of MRS signals.
Magnetic Resonance in Medicine. Roč. 89, č. 3 (2023), s. 1221-1236. ISSN 0740-3194. E-ISSN 1522-2594
EU Projects: European Commission(XE) 813120 - INSPiRE-MED
Institutional support: RVO:68081731
Keywords : deep learning * edited MRS * frequency correction * MR spectroscopy * phase correction
OECD category: Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)
Impact factor: 3.3, year: 2022
Method of publishing: Open access
https://onlinelibrary.wiley.com/doi/10.1002/mrm.29498
Permanent Link: https://hdl.handle.net/11104/0335691File Download Size Commentary Version Access Shamaei2023_Model-informed_MRM.pdf 2 3.9 MB OA CC BY 4.0 Publisher’s postprint open-access Shamaei2022_MRM_Model-informed.pdf 12 4.9 MB Online First, OA CC BY 4.0 Publisher’s postprint open-access - 3.0522218 - ÚPT 2020 RIV GB eng J - Journal Article
Kořínek, Radim - Gajdošík, M. - Trattnig, S. - Starčuk jr., Zenon - Krššák, M.
Low-level fat fraction quantification at 3 T: comparative study of different tools for water-fat reconstruction and MR spectroscopy.
Magnetic Resonance Materials in Physics, Biology and Medicine. -, JAN (2020), č. článku -. ISSN 0968-5243. E-ISSN 1352-8661
R&D Projects: GA MŠMT ED0017/01/01; GA MŠMT(CZ) LO1212; GA MŠMT(CZ) 8J18AT023
Grant - others:AV ČR(CZ) MSM100651801
Program: Program na podporu mezinárodní spolupráce začínajících výzkumných pracovníků
Institutional support: RVO:68081731
Keywords : low-level fat fraction * proton density fat fraction * quantification * MR imaging * MR spectroscopy
OECD category: Radiology, nuclear medicine and medical imaging
Impact factor: 2.310, year: 2020
Method of publishing: Open access
https://link.springer.com/content/pdf/10.1007%2Fs10334-020-00825-9.pdf
Permanent Link: http://hdl.handle.net/11104/0306715 - 4.0469516 - ÚPT 2017 GB eng A - Abstract
Kořínek, Radim - Gajdošík, M. - Trattnig, S. - Krššák, M.
Quantification of low fat fractions at 3T: comparison of water-fat imaging toolbox and MR spectroscopy.
Magnetic Resonance Materials in Physics, Biology and Medicine. Springer. Roč. 29, S1 (2016), s. 203. ISSN 0968-5243. E-ISSN 1352-8661.
[ESMRMB 2016 Congress. 29.09.2016-01.10.2016, Vienna]
R&D Projects: GA ČR GA13-09086S; GA MŠMT(CZ) LO1212
Institutional support: RVO:68081731
Keywords : MR spectroscopy * quantification of low fat fractions
Subject RIV: BH - Optics, Masers, Lasers
Permanent Link: http://hdl.handle.net/11104/0267302 - 5.0454327 - ÚPT 2016 DE eng A - Abstract
Mocioiu, V. - Ortega-Martorell, S. - Olier, I. - Jabłoński, Michal - Starčuková, Jana - Lisboa, P. - Arús, C. - Julia-Sapé, M.
jMRUI plugin software (jMRUI2XML) to allow automated MRS processing and XML-based standardized output.
Magnetic Resonance Materials in Physics, Biology and Medicine. Springer. Roč. 28, S1 (2015), S518. ISSN 0968-5243. E-ISSN 1352-8661.
[ESMRMB 2015. Annual Scientific Meeting /32./. 01.09.2015-03.09.2015, Edinburgh]
Institutional support: RVO:68081731
Keywords : MR Spectroscopy * signal processing * jMRUI * software development * XML
Subject RIV: BH - Optics, Masers, Lasers
Permanent Link: http://hdl.handle.net/11104/0255043 - 6.0454326 - ÚPT 2016 DE eng A - Abstract
Jabłoński, Michal - Starčuková, Jana - Starčuk jr., Zenon
Quality processing assurance extension for the MRS quantitation software jMRUI.
Magnetic Resonance Materials in Physics, Biology and Medicine. Springer. Roč. 28, S1 (2015), S519. ISSN 0968-5243. E-ISSN 1352-8661.
[ESMRMB 2015. Annual Scientific Meeting /32./. 01.09.2015-03.09.2015, Edinburgh]
R&D Projects: GA MŠMT(CZ) LO1212; GA MŠMT ED0017/01/01
Institutional support: RVO:68081731
Keywords : MR Spectroscopy * processing history tracking * software development * jMRUI * SQL
Subject RIV: FS - Medical Facilities ; Equipment
Permanent Link: http://hdl.handle.net/11104/0255038 - 7.0448388 - FGÚ 2016 RIV US eng J - Journal Article
Cahová, M. - Páleníčková, E. - Danková, H. - Sticová, E. - Burian, M. - Drahota, Zdeněk - Červinková, Z. - Kučera, O. - Gladkova, Ch. - Stopka, Pavel - Křížová, Jana - Papáčková, Z. - Oliyarnyk, O. - Kazdová, L.
Metformin prevents ischemia reperfusion-induced oxidative stress in the fatty liver by attenuation of reactive oxygen species formation.
American Journal of Physiology-Gastrointestinal and Liver Physiology. Roč. 309, č. 2 (2015), G100-G111. ISSN 0193-1857. E-ISSN 1522-1547
R&D Projects: GA MŠMT(CZ) LL1204
Institutional support: RVO:67985823 ; RVO:61388980
Keywords : metformin * oxidative stress * mitochondrial respiration * liver injury * 31P MR spectroscopy
Subject RIV: EB - Genetics ; Molecular Biology; CA - Inorganic Chemistry (UACH-T)
Impact factor: 3.297, year: 2015
Permanent Link: http://hdl.handle.net/11104/0250102 - 8.0437477 - ÚPT 2015 RIV CZ cze L4 - Software
Starčuk jr., Zenon - Starčuková, Jana
Virtuální skener NMRScopeB 2.0.
[Virtual Scanner NMRScopeB 2.0.]
Internal code: APL-2014-13 ; 2014
Technical parameters: : NMRScopeB verze 2.0 je vyvinut jako doplňkový modul (plug-in) pro software jMRUI verze 5.1 a vyšší.
Economic parameters: Licencování zdarma pro neziskové subjekty. Licenční podmínky pro komerční subjekty uděluje konsorcium hostitelského produktu jMRUI, jehož je NMRScopeB 2.0 modulem.
R&D Projects: GA MŠMT(CZ) LO1212; GA MŠMT ED0017/01/01
Institutional support: RVO:68081731
Keywords : metabolite basis set * coupled spin system * simulation * MR spectroscopy * pulse sequence development * NMR
Subject RIV: CH - Nuclear ; Quantum Chemistry
http://oldmrui.uab.cat/license-and-download/nmrscope-b-license/
Permanent Link: http://hdl.handle.net/11104/0241084 - 9.0395434 - ÚEM 2014 RIV US eng J - Journal Article
Profant, Oliver - Balogová, Zuzana - Dezortová, M. - Wagnerová, D. - Hájek, M. - Syka, Josef
Metabolic changes in the auditory cortex in presbycusis demonstrated by MR spectroscopy.
Experimental Gerontology. Roč. 48, č. 8 (2013), s. 795-800. ISSN 0531-5565. E-ISSN 1873-6815
R&D Projects: GA ČR GAP304/10/1872
Grant - others:GA MZd(CZ) 00023001IKEM
Institutional support: RVO:68378041
Keywords : Presbycusis * Auditory cortex * MR spectroscopy
Subject RIV: FH - Neurology
Impact factor: 3.529, year: 2013
Permanent Link: http://hdl.handle.net/11104/0224057 - 10.0356047 - ÚPT 2011 RIV CZ cze L4 - Software
Starčuk jr., Zenon - Starčuková, Jana - Graveron-Demilly, D.
Virtuální skener NMRScopeB 1.0.
[Virtual scanner NMRScopeB 1.0.]
Internal code: 201012 ; 2010
Technical parameters: NMRScopeB verze 1.0 je konstruován jako doplňkový modul pro software jMRUI verze 4.0, jehož některé funkce modul využívá.
Economic parameters: Jako součást konsorciálního produktu jMRUl podléhá stejným pravidlům licencování, jež se řídí zásadou bezplatného přístupu pro neziskové subjekty. Licenční podmínky pro komerční subjekty uděluje autor hostitelského produktu jMRUI.
R&D Projects: GA ČR GA102/09/1861
Institutional research plan: CEZ:AV0Z20650511
Keywords : MR spectroscopy * coupled spin system * simulation * pulse sequence development * NMR
Subject RIV: CH - Nuclear ; Quantum Chemistry
Permanent Link: http://hdl.handle.net/11104/0194670