Search results
- 1.0567757 - ÚEM 2023 RIV GB eng J - Journal Article
Petržílek, J. - Pasulka, J. - Malík, R. - Horvat, F. - Kataruka, S. - Fulka, Helena - Svoboda, P.
De novo emergence, existence, and demise of a protein-coding gene in murids.
BMC BIOLOGY. Roč. 20, č. 1 (2022), č. článku 272. E-ISSN 1741-7007
Institutional support: RVO:68378041
Keywords : De novo * Gene * Evolution * LTR * Retrotransposon * CAG * Polyserine * D6Ertd527e * Oocyte
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 5.4, year: 2022
Method of publishing: Open access
https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-022-01470-5
Permanent Link: https://hdl.handle.net/11104/0339005 - 2.0567476 - ÚMG 2023 RIV GB eng J - Journal Article
Petržílek, Jan - Pasulka, Josef - Malík, Radek - Horvat, Filip - Kataruka, Shubhangini - Fulka, Helena - Svoboda, Petr
De novo emergence, existence, and demise of a protein-coding gene in murids.
BMC BIOLOGY. Roč. 20, č. 1 (2022), č. článku 272. E-ISSN 1741-7007
R&D Projects: GA MŠMT(CZ) EF18_046/0016045; GA MŠMT(CZ) LM2018129; GA MŠMT(CZ) LM2018126
EU Projects: European Commission(XE) 647403 - D-FENS
Research Infrastructure: e-INFRA CZ - 90140
Institutional support: RVO:68378050
Keywords : De novo * Gene * Evolution * ltr * Retrotransposon * cag * Polyserine * D6Ertd527e * Oocyte
OECD category: Biology (theoretical, mathematical, thermal, cryobiology, biological rhythm), Evolutionary biology
Impact factor: 5.4, year: 2022
Method of publishing: Open access
https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-022-01470-5
Permanent Link: https://hdl.handle.net/11104/0338724 - 3.0542265 - BFÚ 2022 RIV CH eng J - Journal Article
Tokan, Viktor - Lorenzo, Jose Luis Rodriguez - Jedlička, Pavel - Kejnovská, Iva - Hobza, Roman - Kejnovský, Eduard
Quadruplex-Forming Motif Inserted into 3 ' UTR of Ty1his3-AI Retrotransposon Inhibits Retrotransposition in Yeast.
Biology. Roč. 10, č. 4 (2021), č. článku 347. E-ISSN 2079-7737
R&D Projects: GA ČR(CZ) GA18-00258S; GA ČR(CZ) GA21-00580S
Institutional support: RVO:68081707
Keywords : Ty1 LTR retrotransposon * G-quadruplex * retrotransposition * N-methyl mesoporphyrin (NMM) * Pif1 helicase * yeast
OECD category: Other biological topics
Impact factor: 5.168, year: 2021
Method of publishing: Open access
https://www.mdpi.com/2079-7737/10/4/347
Permanent Link: http://hdl.handle.net/11104/0319724 - 4.0476487 - ÚEB 2018 RIV GB eng J - Journal Article
Mascher, M. - Gundlach, H. - Himmelbach, A. - Beier, S. - Twardziok, S. O. - Wicker, T. - Šimková, Hana - Staňková, Helena - Vrána, Jan - Chan, S. - Munoz-Amatrian, M. - Houben, A. - Doležel, Jaroslav - Ayling, S. - Lonardi, S. - Mayer, K.F.X. - Zhang, G. - Braumann, I. - Spannagl, M. - Li, C. - Waugh, R. - Stein, N. … Total 76 authors
A chromosome conformation capture ordered sequence of the barley genome.
Nature. Roč. 544, č. 7651 (2017), s. 427-433. ISSN 0028-0836. E-ISSN 1476-4687
R&D Projects: GA MŠMT(CZ) LO1204
Institutional support: RVO:61389030
Keywords : bacterial artificial chromosomes * inverted-repeat elements * complex-plant genomes * hi-c * environmental adaptation * ltr retrotransposons * structural variation * maize genome * software * database
OECD category: Plant sciences, botany
Impact factor: 41.577, year: 2017
Permanent Link: http://hdl.handle.net/11104/0272975File Download Size Commentary Version Access 2017_Mascher_NATURE_426.pdf 2 7.2 MB Other open-access - 5.0472869 - ÚMG 2017 RIV DE eng J - Journal Article
Ganesh, Sravya - Svoboda, Petr
Retrotransposon-associated long non-coding RNAs in mice and men.
Pflugers Archiv - European Journal of Physiology. Roč. 468, č. 6 (2016), s. 1049-1060. ISSN 0031-6768. E-ISSN 1432-2013
R&D Projects: GA ČR(CZ) GBP305/12/G034; GA MŠMT LO1419
EU Projects: European Commission 647403; European Commission 607720
Institutional support: RVO:68378050
Keywords : lncRNA * Retrotransposon * line * sine * ltr * MaLR
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 3.156, year: 2016
Permanent Link: http://hdl.handle.net/11104/0270092 - 6.0461699 - ÚBO 2017 RIV GB eng J - Journal Article
Janoušek, Václav - Laukaitis, C. M. - Yanchukov, Alexey - Karn, R. C.
The role of retrotransposons in gene family expansions in the human and mouse genomes.
Genome Biology and Evolution. Roč. 8, č. 9 (2016), s. 2632-2650. ISSN 1759-6653. E-ISSN 1759-6653
R&D Projects: GA MŠMT EE2.3.20.0303
Institutional support: RVO:68081766
Keywords : gene families * transposable elements * retrotransposons * LINE * LTR * SINE
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 3.979, year: 2016
Permanent Link: http://hdl.handle.net/11104/0261285File Download Size Commentary Version Access 0461699.pdf 1 1.8 MB Publisher’s postprint open-access - 7.0457633 - BFÚ 2016 RIV NL eng J - Journal Article
Kejnovský, Eduard - Tokan, Viktor - Lexa, M.
Transposable elements and G-quadruplexes.
Chromosome Research. Roč. 23, č. 3 (2015), s. 615-623. ISSN 0967-3849. E-ISSN 1573-6849
R&D Projects: GA ČR(CZ) GA15-02891S
Institutional support: RVO:68081707
Keywords : TRINUCLEOTIDE REPEAT DNA * LTR RETROTRANSPOSONS * BINDING PROTEIN
Subject RIV: BO - Biophysics
Impact factor: 2.590, year: 2015
Permanent Link: http://hdl.handle.net/11104/0258038 - 8.0446262 - ÚEB 2016 RIV GB eng J - Journal Article
Barghini, E. - Natali, L. - Giordani, T. - Cossu, R.M. - Scalabrin, S. - Cattonaro, F. - Šimková, Hana - Vrána, Jan - Doležel, Jaroslav - Morgante, M. - Cavallini, A.
LTR retrotransposon dynamics in the evolution of the olive (Olea europaea) genome.
Dna Research. Roč. 22, č. 1 (2015), s. 91-100. ISSN 1340-2838. E-ISSN 1756-1663
R&D Projects: GA ČR GBP501/12/G090; GA MŠMT(CZ) LO1204
Institutional support: RVO:61389030
Keywords : LTR retrotransposons * next-generation sequencing * olive
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 5.267, year: 2015
Permanent Link: http://hdl.handle.net/11104/0248245File Download Size Commentary Version Access 2015_Barghini_DNA RESEARCH_91.pdf 8 589.9 KB Other open-access - 9.0377346 - BC 2013 RIV NL eng J - Journal Article
Steinbauerová, Veronika - Neumann, Pavel - Novák, Petr - Macas, Jiří
A widespread occurrence of extra open reading frames in plant Ty3/gypsy retrotransposons.
Genetica. Roč. 139, 11-12 (2011), s. 1543-1555. ISSN 0016-6707. E-ISSN 1573-6857
Institutional research plan: CEZ:AV0Z50510513
Keywords : Additional ORFs * LTR retrotransposons * Repetitive DNA * Plant genome
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 2.148, year: 2011
Permanent Link: http://hdl.handle.net/11104/0209523 - 10.0322579 - ÚEB 2009 RIV DE eng J - Journal Article
Kofler, R. - Bartoš, Jan - Gong, L. - Stift, G. - Suchánková, Pavla - Šimková, Hana - Berenyi, M. - Burg, K. - Doležel, Jaroslav - Lelley, T.
Development of microsatellite markers specific for the short arm of rye (Secale cereale L.) chromosome 1.
[Vývoj mikrosatelitových markerů specifických pro chromozóm 1 krátkého ramene žita (Secale cereale L.).]
Theoretical and Applied Genetics. Roč. 117, č. 6 (2008), s. 915-926. ISSN 0040-5752. E-ISSN 1432-2242
R&D Projects: GA ČR GA521/04/0607; GA ČR GP521/06/P412
Institutional research plan: CEZ:AV0Z50380511
Keywords : NON-LTR RETROTRANSPOSONS * ORYZA-SATIVA L. * PLANT GENOMES
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 3.490, year: 2008
Permanent Link: http://hdl.handle.net/11104/0170793