Search results
- 1.0582786 - ÚMG 2025 RIV US eng J - Journal Article
Pallavi, R. - Gatti, E. - Durfort, T. - Stendardo, M. - Ravasio, R. - Leonardi, T. - Falvo, P. - Duso, B. A. - Punzi, S. - Xieraili, A. - Polazzi, A. - Verrelli, D. - Trastulli, D. - Ronzoni, S. - Frascolla, S. - Perticari, G. - Elgendy, Mohamed - Varasi, M. - Colombo, E. - Giorgio, M. - Lanfrancone, L. - Minucci, S. - Mazzarella, L. - Pelicci, P. G.
Caloric restriction leads to druggable LSD1-dependent cancer stem cells expansion.
Nature Communications. Roč. 15, č. 1 (2024), č. článku 828. E-ISSN 2041-1723
Institutional support: RVO:68378050
Keywords : growth-factor-i * expression analysis * gene-expression * acute-leukemia * apoptosis * differentiation * activation * trail * alpha * proliferation
OECD category: Cell biology
Impact factor: 16.6, year: 2022
Method of publishing: Open access
https://www.nature.com/articles/s41467-023-44348-y
Permanent Link: https://hdl.handle.net/11104/0352875 - 2.0571021 - ÚOCHB 2024 RIV GB eng J - Journal Article
Fallon, T. R. - Čalounová, Tereza - Mokrejš, Martin - Weng, J. K. - Pluskal, Tomáš
transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation.
BMC Bioinformatics. Roč. 24, č. 1 (2023), č. článku 133. ISSN 1471-2105. E-ISSN 1471-2105
R&D Projects: GA ČR(CZ) GM21-11563M
EU Projects: European Commission(XE) 891397 - KavaTarget
Institutional support: RVO:61388963
Keywords : de novo transcriptome assembly * RNA-seq * non-model organisms * transcriptome annotation * differential expression analysis * reproducible software * high-performance computing
OECD category: Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)
Impact factor: 3, year: 2022
Method of publishing: Open access
https://doi.org/10.1186/s12859-023-05254-8
Permanent Link: https://hdl.handle.net/11104/0342339File Download Size Commentary Version Access 10.1186s12859-023-05254-8.pdf 0 1.9 MB Publisher’s postprint open-access - 3.0563322 - ÚEB 2023 RIV US eng J - Journal Article
Batcho, Agossa Anicet - Nwogwugwu, J. O. - Ali, M. - Jabbar, B. - Javaid, A. - Fellner, Martin
Identification and characterisation of blue light photoreceptor gene family and their expression in tomato (Solanum lycopersicum) under cold stress.
Functional Plant Biology. Roč. 49, č. 7 (2022), s. 647-658. ISSN 1445-4408. E-ISSN 1445-4416
Institutional support: RVO:61389030
Keywords : abiotic stress tolerance * bioinformatics * blue light signaling * expression analysis * photoreceptor genes * photosynthesis * tomato * transcriptome data
OECD category: Plant sciences, botany
Impact factor: 3, year: 2022
Method of publishing: Open access
https://doi.org/10.1071/FP21297
Permanent Link: https://hdl.handle.net/11104/0335311File Download Size Commentary Version Access 2022_Batcho_FUNCTIONAL PLANT BIOLOGY_647.pdf 8 1.4 MB Other open-access - 4.0553251 - BC 2022 RIV GB eng J - Journal Article
Herman, E.K. - Greninger, A. - van der Giezen, M. - Ginger, M. L. - Ramirez-Macias, I. - Miller, H. - Morgan, M. - Tsaousis, A. - Velle, K. - Vargova, R. - Záhonová, Kristýna - Najle, S. - MacIntyre, G. - Muller, N. - Wittwer, M. - Zysset-Burri, D. - Eliáš, M. - Slamovits, C. - Weirauch, M. - Fritz-Laylin, L. - Marciano-Cabral, F. - Puzon, G. - Walsh, T. - Chiu, C. - Dacks, Joel Bryan
Genomics and transcriptomics yields a system-level view of the biology of the pathogen Naegleria fowleri.
BMC BIOLOGY. Roč. 19, č. 1 (2021), č. článku 142. E-ISSN 1741-7007
R&D Projects: GA MŠMT(CZ) EF16_019/0000759
Institutional support: RVO:60077344
Keywords : primary amebic meningoencephalitis * multiple sequence alignment * nonpathogenic naegleria * rieske oxygenase * tetrahymena-thermophila * cell-differentiation * expression analysis * gene-expression * messenger-rna * protein * Illumina * RNA-Seq * Genome sequence * Protease * Cytoskeleton * Metabolism * Lysosomal * Inter-strain diversity * Neuropathogenic
OECD category: Microbiology
Impact factor: 7.364, year: 2021
Method of publishing: Open access
https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-021-01078-1
Permanent Link: http://hdl.handle.net/11104/0328234 - 5.0547499 - ÚVGZ 2022 RIV IE eng J - Journal Article
Pandey, C. - Grosskinsky, D. K. - Westergaard, J. C. - Jorgensen, H. J. L. - Svensgaard, J. - Christensen, S. - Schulz, A. - Roitsch, Thomas
Identification of a bio-signature for barley resistance against Pyrenophora teres infection based on physiological, molecular and sensor-based phenotyping.
Plant Science. Roč. 313, DEC (2021), s. 1-11. ISSN 0168-9452. E-ISSN 1873-2259
R&D Projects: GA MŠMT(CZ) LO1415
Research Infrastructure: CzeCOS III - 90123
Institutional support: RVO:86652079
Keywords : source-sink relationships * carbohydrate-metabolism * hydrogen-peroxide * defense-mechanisms * leaf reflectance * gene-expression * theobroma-cacao * powdery mildew * stress * disease * Crop resistance * Enzyme activity signatures * Expression analysis * Multispectral imaging * Fungal DNA * PhenoLab * Pre-symptomatic * Bio-signatures
OECD category: Biochemistry and molecular biology
Impact factor: 5.363, year: 2021
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/pii/S0168945221002685?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0323714 - 6.0547151 - MBÚ 2022 RIV GB eng J - Journal Article
Mangiola, S. - Thomas, E. A. - Modrák, Martin - Vehtari, A. - Papenfuss, A. T.
Probabilistic outlier identification for RNA sequencing generalized linear models.
NAR Genomics and Bioinformatics. Roč. 3, č. 1 (2021), č. článku lqab005. E-ISSN 2631-9268
R&D Projects: GA MŠMT(CZ) LM2018131
Institutional support: RVO:61388971
Keywords : differential expression analysis * bayesian-analysis * family
OECD category: Biology (theoretical, mathematical, thermal, cryobiology, biological rhythm), Evolutionary biology
Method of publishing: Open access
https://academic.oup.com/nargab/article/3/1/lqab005/6155871
Permanent Link: http://hdl.handle.net/11104/0323475 - 7.0545878 - ÚEB 2022 RIV CH eng J - Journal Article
Náprstková, Alena - Malínská, Kateřina - Záveská Drábková, Lenka - Billey, E. - Náprstková, Dagmar - Sýkorová, Eva - Bousquet-Antonelli, C. - Honys, David
Characterization of alba family expression and localization in arabidopsis thaliana generative organs.
International Journal of Molecular Sciences. Roč. 22, č. 4 (2021), č. článku 1652. E-ISSN 1422-0067
R&D Projects: GA ČR(CZ) GA18-07027S; GA MŠMT(CZ) EF16_019/0000738; GA MŠMT(CZ) LM2018129
Institutional support: RVO:61389030 ; RVO:68081707
Keywords : alba * Arabidopsis thaliana * Confocal microscopy * Expression analysis * Flowering * Heat stress * pabp3 * Pollen development * Protein localization
OECD category: Plant sciences, botany
Impact factor: 6.208, year: 2021
Method of publishing: Open access
http://doi.org/10.3390/ijms22041652
Permanent Link: http://hdl.handle.net/11104/0322504File Download Size Commentary Version Access 2021_Naprstkova_INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES_1652.pdf 1 10.2 MB Other open-access - 8.0476381 - ÚEB 2018 RIV CH eng J - Journal Article
Cheng, X. - Floková, Kristýna - Bouwmeester, H. - Ruyter-Spira, C.
The Role of Endogenous Strigolactones and Their Interaction with ABA during the Infection Process of the Parasitic Weed Phelipanche ramosa in Tomato Plants.
Frontiers in Plant Science. Roč. 8, MAR 24 (2017), č. článku 392. ISSN 1664-462X. E-ISSN 1664-462X
Institutional support: RVO:61389030
Keywords : suppression subtractive hybridization * hemiparasite rhinanthus-minor * putative defense genes * box protein max2 * abscisic-acid * striga-hermonthica * arabidopsis-thaliana * orobanche-aegyptiaca * medicago-truncatula * expression analysis * root parasitic plant * strigolactone * abscisic acid * post-attachment resistance * plant architecture
OECD category: Plant sciences, botany
Impact factor: 3.677, year: 2017
Permanent Link: http://hdl.handle.net/11104/0272892File Download Size Commentary Version Access 2017_Cheng_FRONTIERS IN PLANT SCIENCE_392.pdf 1 4.4 MB Other open-access - 9.0429940 - ÚEB 2015 RIV GB eng J - Journal Article
Zhang, K. - Novák, Ondřej - Wei, Z. - Gou, M. - Zhang, X. - Yu, Y. - Yang, H. - Cai, Y. - Strnad, Miroslav - Liu, Ch.-J.
Arabidopsis ABCG14 protein controls the acropetal translocation of root-synthesized cytokinins.
Nature Communications. Roč. 5, FEB 2014 (2014). E-ISSN 2041-1723
R&D Projects: GA MŠMT(CZ) LO1204
Grant - others:GA MŠk(CZ) ED0007/01/01
Program: ED
Institutional support: RVO:61389030
Keywords : EQUILIBRATIVE NUCLEOSIDE TRANSPORTER * EXPRESSION ANALYSIS * MERISTEM ACTIVITY
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 11.470, year: 2014
Permanent Link: http://hdl.handle.net/11104/0234904File Download Size Commentary Version Access 2014_Zhang_NATURE COMMUNICATIONS_4274.pdf 8 1.5 MB Other open-access - 10.0345213 - BFÚ 2011 RIV NL eng J - Journal Article
Hradilová, Jana - Brzobohatý, Břetislav
Expression pattern of the AHP gene family from Arabidopsis thaliana and organ specific alternative splicing in the AHP5 gene.
Biologia Plantarum. Roč. 51, č. 2 (2007), s. 257-267. ISSN 0006-3134. E-ISSN 1573-8264
Grant - others:GA MŠk(CZ) LN00A081; GA AV ČR(CZ) IAA600040612
Program: LN; IA
Institutional research plan: CEZ:AV0Z50040507; CEZ:AV0Z50040702
Keywords : Arabidopsis two component systems * gene expression analysis * real time RT-PCR
Subject RIV: BO - Biophysics
Impact factor: 1.259, year: 2007
Permanent Link: http://hdl.handle.net/11104/0186534