Search results
- 1.0562222 - ÚBO 2023 RIV GB eng J - Journal Article
Liu, M. - Yu, C. - Zhang, Z. - Song, M. - Sun, X. - Piálek, Jaroslav - Jacob, J. - Lu, J. - Cong, L. - Zhang, H. - Wang, Y. - Li, G. - Feng, Z. - Du, Z. - Wang, M. - Wan, X. - Wang, D. - Wang, Y.-L. - Li, H. - Wang, Z. - Zhang, B. - Zhang, Z.
Whole-genome sequencing reveals the genetic mechanisms of domestication in classical inbred mice.
Genome Biology. Roč. 23, č. 1 (2022), č. článku 203. ISSN 1474-760X. E-ISSN 1474-760X
R&D Projects: GA ČR(CZ) GA16-23773S
Institutional support: RVO:68081766
Keywords : Mus musculus * Domestication * Positively selected gene * Genome sequencing * Alternative splicing
OECD category: Zoology
Impact factor: 12.3, year: 2022
Method of publishing: Open access
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-022-02772-1
Permanent Link: https://hdl.handle.net/11104/0334839File Download Size Commentary Version Access 0562222.pdf 0 3.3 MB Publisher’s postprint open-access - 2.0544141 - ÚMG 2022 RIV GB eng J - Journal Article
Gurumurthy, C.B. - Sedláček, Radislav - Kašpárek, Petr - Burgio, G. … Total 113 authors
Response to correspondence on ´Reproducibility of CRISPR-Cas9 methods for generation of conditional mouse alleles: a multi-center evaluation´.
Genome Biology. Roč. 22, č. 1 (2021), č. článku 99. ISSN 1474-760X. E-ISSN 1474-760X
Institutional support: RVO:68378050
Keywords : CRISPR-Cas9 * Mouse * Transgenesis * Homology-directed repair * Conditional knockout mouse * Floxed allele * Oligonucleotide * Machine learning * Reproducibility
OECD category: Biochemistry and molecular biology
Impact factor: 18.010, year: 2021
Method of publishing: Open access
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-021-02320-3
Permanent Link: http://hdl.handle.net/11104/0321184 - 3.0543910 - FGÚ 2022 RIV GB eng J - Journal Article
Witte, F. - Ruiz-Orera, J. - Mattioli, C. C. - Blachut, S. - Adami, E. - Schulz, J. F. - Schneider-Lunitz, V. - Hummel, O. - Patone, G. - Mücke, M. B. - Šilhavý, Jan - Heinig, M. - Bottolo, L. - Sanchis, D. - Vingron, M. - Chekulaeva, M. - Pravenec, Michal - Hubner, N. - van Heesch, S.
A trans locus causes a ribosomopathy in hypertrophic hearts that affects mRNA translation in a protein length-dependent fashion.
Genome Biology. Roč. 22, č. 1 (2021), č. článku 191. ISSN 1474-760X. E-ISSN 1474-760X
Grant - others:AV ČR(CZ) AP1502
Program: Akademická prémie - Praemium Academiae
Institutional support: RVO:67985823
Keywords : genetic variation * trans QTL mapping * translational efficiency * ribosome profiling * cardiac hypertrophy * spontaneously hypertensive rats (SHR)
OECD category: Cardiac and Cardiovascular systems
Impact factor: 18.010, year: 2021
Method of publishing: Open access
https://doi.org/10.1186/s13059-021-02397-w
Permanent Link: http://hdl.handle.net/11104/0321014 - 4.0531014 - ÚMG 2021 RIV GB eng J - Journal Article
Sedláček, Radislav … Total 44 authors
The Deep Genome Project.
Genome Biology. Roč. 21, č. 1 (2020), č. článku 18. ISSN 1474-760X. E-ISSN 1474-760X
Institutional support: RVO:68378050
Keywords : mouse * variants
OECD category: Biochemistry and molecular biology
Impact factor: 13.583, year: 2020
Method of publishing: Open access
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-020-1931-9
Permanent Link: http://hdl.handle.net/11104/0309779 - 5.0522966 - ÚMG 2020 RIV GB eng J - Journal Article
Sedláček, Radislav - Kašpárek, Petr … Total 113 authors
Reproducibility of CRISPR-Cas9 methods for generation of conditional mouse alleles: a multi-center evaluation.
Genome Biology. Roč. 20, č. 1 (2019), č. článku 171. ISSN 1474-760X. E-ISSN 1474-760X
R&D Projects: GA MŠMT(CZ) LM2015040; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT ED2.1.00/19.0395
Institutional support: RVO:68378050
Keywords : CRISPR-Cas9 * Mouse * Transgenesis * Homology-directed repair * Conditional knockout mouse * Floxed allele * Oligonucleotide * Long single-stranded DNA * Machine learning * Reproducibility
OECD category: Biochemistry and molecular biology
Impact factor: 10.806, year: 2019
Method of publishing: Open access
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-019-1776-2
Permanent Link: http://hdl.handle.net/11104/0307380 - 6.0518783 - ÚŽFG 2020 RIV GB eng J - Journal Article
Hanna, C. W. - Peréz-Palacios, R. - Gahurová, Lenka - Schubert, M. - Krueger, F. - Biggins, L. - Andrews, S. - Colomé-Tatché, M. - Bourc´his, D. - Dean, W. - Kelsey, G.
Endogenous retroviral insertions drive non-canonical imprinting in extra-embryonic tissues.
Genome Biology. Roč. 20, č. 1 (2019), č. článku 225. ISSN 1474-760X. E-ISSN 1474-760X
Institutional support: RVO:67985904
Keywords : genomic imprinting * histone modifications * extra-embryonic
OECD category: Biochemistry and molecular biology
Impact factor: 10.806, year: 2019
Method of publishing: Open access
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-019-1833-x
Permanent Link: http://hdl.handle.net/11104/0303841 - 7.0509547 - ÚOCHB 2020 RIV GB eng J - Journal Article
Ison, J. - Ienasescu, H. - Chmura, P. - Rydza, E. - Ménager, H. - Kalaš, M. - Schwämmle, V. - Grüning, B. - Beard, N. - Lopez, R. - Duvaud, S. - Stockinger, H. - Persson, B. - Svobodová Vařeková, R. - Raček, T. - Vondrášek, Jiří - Peterson, H. - Salumets, A. - Jonassen, I. - Hooft, R. - Nyrönen, T. - Valencia, A. - Capella, S. - Gelpí, J. - Zambelli, F. - Savakis, B. - Leskošek, B. - Rapacki, K. - Blanchet, C. - Jimenez, R. - Oliveira, A. - Vriend, G. - Collin, O. - van Helden, J. - Longreen, P. - Brunak, S.
The bio.tools registry of software tools and data resources for the life sciences.
Genome Biology. Roč. 20, č. 1 (2019), č. článku 164. ISSN 1474-760X. E-ISSN 1474-760X
EU Projects: European Commission(XE) 676559 - ELIXIR-EXCELERATE
Institutional support: RVO:61388963
Keywords : bio.tools * life science tools
OECD category: Biochemistry and molecular biology
Impact factor: 10.806, year: 2019
Method of publishing: Open access
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-019-1772-6
Permanent Link: http://hdl.handle.net/11104/0300294 - 8.0494033 - ÚEB 2019 RIV GB eng J - Journal Article
Keeble-Gagnere, G. - Rigault, P. - Tibbits, J. F. G. - Pasam, R. - Hayden, M. - Forrest, K. L. - Frenkel, Z. - Korol, A. - Huang, B. - Cavanagh, B. - Taylor, J. - Abrouk, Michael - Sharpe, A. J. - Konkin, D. - Sourdille, P. - Darrier, B. - Choulet, F. - Bernard, E. - Rochfort, S. - Dimech, A. - Watson-Haigh, N. - Baumann, W. - Eckermann, P. - Fleury, V. - Juhász, M. - Boisvert, S. - Nolin, M.A. - Doležel, Jaroslav - Šimková, Hana - Toegelová, Helena - Šafář, Jan - Luo, M.C. - Cámara, F. - Pfeifer, M. - Isdale, D. - Nystrom-Persson, J. - Koo, D.H. - Tinning, M. - Cui, X. - Ru, Z. - Appels, R. … Total 42 authors
Optical and physical mapping with local finishing enables megabase-scale resolution of agronomically important regions in the wheat genome.
Genome Biology. Roč. 19, AUG 17 (2018), č. článku 112. ISSN 1474-760X. E-ISSN 1474-760X
R&D Projects: GA MŠMT(CZ) LO1204
Institutional support: RVO:61389030
Keywords : chromosomes * genes * qtl * segregation * centromeres * yield * size * Wheat sequence finishing * Megabase-scale integration * Optical/physical maps Grain quality * Yield
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 14.028, year: 2018
Permanent Link: http://hdl.handle.net/11104/0287275File Download Size Commentary Version Access 2018_Keeble-Gagnere_GENOME BIOLOGY_112.pdf 3 3.8 MB Other open-access - 9.0479525 - ÚEM 2018 RIV GB eng J - Journal Article
Pantalacci, S. - Gueguen, L. - Petit, C. - Lambert, A. - Peterková, Renata - Sémon, E.
Transcriptomic signatures shaped by cell proportions shed light on comparative developmental biology.
Genome Biology. Roč. 18, feb (2017), s. 29. ISSN 1474-760X. E-ISSN 1474-760X
R&D Projects: GA ČR(CZ) GB14-37368G
Institutional support: RVO:68378041
Keywords : comparative transcriptomics * developmental biology * transcriptomic signature
OECD category: Developmental biology
Impact factor: 13.214, year: 2017
Permanent Link: http://hdl.handle.net/11104/0275739 - 10.0336003 - ÚEB 2010 RIV GB eng J - Journal Article
Křeček, Pavel - Skůpa, Petr - Libus, Jiří - Naramoto, S. - Tejos, R. - Friml, J. - Zažímalová, Eva
The PIN-FORMED (PIN) protein family of auxin transporters.
Genome Biology. Roč. 10, č. 12 (2009), s. 249.1-249.11. ISSN 1474-760X. E-ISSN 1474-760X
R&D Projects: GA MŠMT(CZ) LC06034; GA AV ČR KJB600380904; GA AV ČR(CZ) IAA601630703
Institutional research plan: CEZ:AV0Z50380511
Keywords : PIN protein family * auxin efflux carriers * auxin transport
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 6.626, year: 2009
Permanent Link: http://hdl.handle.net/11104/0180335