Search results
- 1.0598836 - MBÚ 2025 RIV US eng J - Journal Article
Kopejtka, Karel - Tomasch, Jurgen - Shivaramu, Sahana - Saini, Mohit Kumar - Kaftan, David - Koblížek, Michal
Minimal transcriptional regulation of horizontally transferred photosynthesis genes in phototrophic bacterium Gemmatimonas phototrophica.
mSystems. Roč. 9, č. 9 (2024). ISSN 2379-5077. E-ISSN 2379-5077
R&D Projects: GA ČR(CZ) GX19-28778X; GA MŠMT(CZ) EH22_008/0004624
Institutional support: RVO:61388971
Keywords : aerobic anoxygenic phototrophs * bacteriochlorophyll * growth * light * expression * state * Gemmatimonadota * anoxygenic photosynthesis * bacteriochlorophyll * horizontal gene transfer * transcriptomics
OECD category: Microbiology
Impact factor: 5, year: 2023
Method of publishing: Open access
https://journals.asm.org/doi/10.1128/msystems.00706-24
Permanent Link: https://hdl.handle.net/11104/0356425File Download Size Commentary Version Access kopejtka-et-al-2024-minimal-transcriptional-regulation-of-horizontally-transferred-photosynthesis-genes-in-phototrophic.pdf 0 1.4 MB Publisher’s postprint open-access - 2.0588257 - MBÚ 2025 RIV US eng J - Journal Article
Šímová, I. - Chrupková, P. - Gardiner, Alastair T. - Koblížek, Michal - Kloz, M. - Polívka, T.
Femtosecond Stimulated Raman Spectroscopy of Linear Carotenoids.
Journal of Physical Chemistry Letters. Roč. 15, č. 29 (2024), s. 7466-7472. ISSN 1948-7185
R&D Projects: GA ČR(CZ) GX19-28778X
Institutional support: RVO:61388971
Keywords : c=c stretching mode * bacteriochlorophyll energy-transfer * excited-state dynamics * internal-conversion * beta-carotene * s-1 state * transient absorption * ultrafast dynamics * triplet conversion * s-asterisk
OECD category: Microbiology
Impact factor: 4.8, year: 2023
Method of publishing: Open access
https://pubs.acs.org/doi/10.1021/acs.jpclett.4c01272
Permanent Link: https://hdl.handle.net/11104/0355306 - 3.0587212 - MBÚ 2025 RIV US eng J - Journal Article
Tomasch, Jurgen - Kopejtka, Karel - Shivaramu, Sahana - Mujakić, Izabela - Koblížek, Michal
On the evolution of chromosomal regions with high gene strand bias in bacteria.
mBio. Roč. 15, č. 6 (2024), č. článku mbio.00602-24. ISSN 2161-2129. E-ISSN 2150-7511
R&D Projects: GA ČR(CZ) GX19-28778X
Institutional support: RVO:61388971
Keywords : replication * genome * organization * repeats * genome organization * genome evolution * gene order * strand bias * Gemmatimonadota
OECD category: Microbiology
Impact factor: 5.1, year: 2023
Method of publishing: Open access
https://journals.asm.org/doi/epub/10.1128/mbio.00602-24
Permanent Link: https://hdl.handle.net/11104/0354468 - 4.0585489 - MBÚ 2025 RIV GB eng J - Journal Article
Villena-Alemany, Cristian - Mujakić, Izabela - Fecskeová, L. K. - Woodhouse, J. - Auladell, A. - Dean, Jason Lawrence - Hanusová, Martina - Socha, M. - Gazulla, C. R. - Ruscheweyh, H. - Sunagawa, S. - Kavagutti, V. S. - Andrei, A. - Grossart, H. - Ghai, Rohit - Koblížek, Michal - Piwosz, Kasia
Phenology and ecological role of aerobic anoxygenic phototrophs in freshwaters.
Microbiome. Roč. 12, č. 1 (2024), č. článku 65. ISSN 2049-2618. E-ISSN 2049-2618
R&D Projects: GA ČR(CZ) GX19-28778X; GA ČR(CZ) GX20-12496X
Institutional support: RVO:61388971 ; RVO:60077344
Keywords : semi-micro determination * peg-model * diversity * bacteria * gene * growth * populations * evolution * atlantic * database * Freshwaters * Aquatic microbial ecology * Microbial seasonal succession * Long-term sampling * Aerobic anoxygenic phototrophs * pufM gene * PEG model * Photoheterotrophs
OECD category: Microbiology; Microbiology (BC-A)
Impact factor: 13.8, year: 2023
Method of publishing: Open access
https://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-024-01786-0
Permanent Link: https://hdl.handle.net/11104/0353176 - 5.0585431 - MBÚ 2025 RIV US eng J - Journal Article
Tomasch, Jurgen - Kopejtka, Karel - Bílý, Tomáš - Gardiner, Alastair T. - Gardian, Zdenko - Shivaramu, Sahana - Koblížek, Michal - Kaftan, David
A photoheterotrophic bacterium from Iceland has adapted its photosynthetic machinery to the long days of polar summer.
mSystems. Roč. 9, č. 3 (2024), č. článku e0131123. ISSN 2379-5077. E-ISSN 2379-5077
R&D Projects: GA MŠMT(CZ) LM2018129; GA ČR(CZ) GX19-28778X; GA MŠMT(CZ) LM2023050; GA MŠMT(CZ) EF18_046/0016045
Research Infrastructure: Czech-BioImaging II - 90129
Institutional support: RVO:61388971 ; RVO:60077344
Keywords : aerobic anoxygenic phototrophs * light * database * carotenoids * stress * growth * oxygen * image * aap * gene expression * light adaptation * photosynthesis * Proteobacteria * Sediminicoccus
OECD category: Microbiology; Cell biology (BC-A)
Impact factor: 5, year: 2023
Method of publishing: Limited access
https://journals.asm.org/doi/10.1128/msystems.01311-23
Permanent Link: https://hdl.handle.net/11104/0353141 - 6.0585423 - MBÚ 2025 RIV US eng J - Journal Article
Koblížek, Michal - Ferrera, I. - Kolářová, Eva - Duhamel, S. - Popendorf, K. J. - Gasol, J. M. - Van Mooy, B. A. S.
Growth and mortality of aerobic anoxygenic phototrophs in the North Pacific Subtropical Gyre.
Applied and Environmental Microbiology. Roč. 90, č. 4 (2024), č. článku e0003224. ISSN 0099-2240. E-ISSN 1098-5336
R&D Projects: GA ČR(CZ) GX19-28778X
Institutional support: RVO:61388971
Keywords : photoheterotrophic bacteria * photosynthetic bacterium * oligotrophic gradient * surface waters * light * diversity * rates * bacteriochlorophyll * variability * phosphorus * aerobic anoxygenic phototrophs * bacteriochlorophyll a * marine bacteria * North Pacific Subtropical Gyre * Station ALOHA
OECD category: Microbiology
Impact factor: 3.9, year: 2023
Method of publishing: Open access
https://journals.asm.org/doi/10.1128/aem.00032-24
Permanent Link: https://hdl.handle.net/11104/0353132 - 7.0584830 - MBÚ 2025 RIV US eng J - Journal Article
Mansky, J. - Wang, H. - Wagner-Doebler, I. - Tomasch, Jurgen
The effect of site-specific recombinases XerCD on the removal of over-replicated chromosomal DNA through outer membrane vesicles in bacteria.
Microbiology Spectrum. Roč. 12, č. 3 (2024), č. článku 0234323. ISSN 2165-0497. E-ISSN 2165-0497
R&D Projects: GA ČR(CZ) GX19-28778X
Institutional support: RVO:61388971
Keywords : ftsk * activation * transformation * biogenesis * DNA replication * DNA repair * outer membrane vesicles
OECD category: Microbiology
Impact factor: 3.7, year: 2023
Method of publishing: Open access
https://journals.asm.org/doi/10.1128/spectrum.02343-23
Permanent Link: https://hdl.handle.net/11104/0352662 - 8.0576651 - MBÚ 2024 RIV US eng J - Journal Article
Mujakić, Izabela - Cabello-Yeves, Pedro J. - Villena-Alemany, Cristian - Piwosz, K. - Rodriguez-Valera, F. - Picazo, A. - Camacho, A. - Koblížek, Michal
Multi-environment ecogenomics analysis of the cosmopolitan phylum Gemmatimonadota.
Microbiology Spectrum. Roč. 11, č. 5 (2023), č. článku e0111223. ISSN 2165-0497. E-ISSN 2165-0497
R&D Projects: GA ČR(CZ) GX19-28778X
Institutional support: RVO:61388971
Keywords : Gemmatimonadota * gemmatimonadetes * anoxygenic phototrophs * MAGs * metagenome * RuBisCO
OECD category: Microbiology
Impact factor: 3.7, year: 2023
Method of publishing: Open access
https://journals.asm.org/doi/10.1128/spectrum.01112-23
Permanent Link: https://hdl.handle.net/11104/0347823 - 9.0572692 - MBÚ 2024 RIV NL eng J - Journal Article
Gardiner, Alastair T. - Mujakić, Izabela - Bína, David - Gardian, Zdenko - Kopejtka, Karel - Nupur, Nupur - Qian, P. - Koblížek, Michal
Characterisation of the photosynthetic complexes from the marine gammaproteobacterium Congregibacter litoralis KT71.
Biochimica Et Biophysica Acta-Bioenergetics. Roč. 1864, č. 2 (2023), č. článku 148946. ISSN 0005-2728. E-ISSN 1879-2650
R&D Projects: GA ČR(CZ) GX19-28778X; GA ČR(CZ) GA20-01159S
Institutional support: RVO:61388971 ; RVO:60077344
Keywords : aap * Congregibacter * Photoheterotrophy * Photosynthesis * Lightharvesting * Purple bacteria
OECD category: Microbiology; Microbiology (BC-A)
Impact factor: 3.4, year: 2023
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/pii/S0005272822004169?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0343301 - 10.0572376 - BC 2024 RIV US eng J - Journal Article
Munoz-Gomez, S.A. - Cadena, Lawrence Rudy - Gardiner, Alastair T. - Leger, M.M. - Sheikh, Shaghayegh - Connell, L.B. - Bílý, Tomáš - Kopejtka, Karel - Beatty, J.T. - Koblížek, Michal - Roger, A.J. - Slamovits, C.H. - Lukeš, Julius - Hashimi, Hassan
Intracytoplasmic-membrane development in alphaproteobacteria involves the homolog of the mitochondrial crista-developing protein Mic60.
Current Biology. Roč. 33, č. 6 (2023), s. 1099-+. ISSN 0960-9822. E-ISSN 1879-0445
R&D Projects: GA ČR(CZ) GA20-23513S; GA ČR(CZ) GX19-28778X; GA MŠMT(CZ) EF16_019/0000759; GA MŠMT(CZ) LM2015062
Institutional support: RVO:60077344 ; RVO:61388971
Keywords : Intracytoplasmic-membrane * mitochondrial * crista-developing protein Mic60
OECD category: Microbiology; Microbiology (MBU-M)
Impact factor: 8.1, year: 2023
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/abs/pii/S0960982223001999?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0343720