Search results
- 1.0571534 - BFÚ 2024 RIV NL eng J - Journal Article
Weidner, J. - Neitzel, Ch. - Gote, M. - Deck, J. - Kuentzelmann, K. - Pilarczyk, G. - Falk, Martin - Hausmann, M.
Advanced image-free analysis of the nano-organization of chromatin and other biomolecules by Single Molecule Localization Microscopy (SMLM).
Computational and Structural Biotechnology Journal. Roč. 21, MAR 2023 (2023), s. 2018-2034. ISSN 2001-0370. E-ISSN 2001-0370
R&D Projects: GA ČR GC20-04109J
Institutional support: RVO:68081707
Keywords : Single molecule localization microscopy * (smlm) * Ripley distance frequency histograms * Persistent homology * Persistent image * Principal component analysis * Application of mathematical analysis tools to * chromatin organization and DNA repair * processes
OECD category: Biochemistry and molecular biology
Impact factor: 6, year: 2022
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S2001037023001083?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0349895 - 2.0570211 - BFÚ 2024 RIV CH eng J - Journal Article
Erenpreisa, J. - Giuliani, A. - Yoshikawa, K. - Falk, Martin - Hildenbrand, G. - Salmina, K. - Freivalds, T. - Vainshelbaum, N. - Weidner, J. - Sievers, A. - Pilarczyk, G. - Hausmann, M.
Spatial-Temporal Genome Regulation in Stress-Response and Cell-Fate Change.
International Journal of Molecular Sciences. Roč. 24, č. 3 (2023), č. článku 2658. E-ISSN 1422-0067
R&D Projects: GA ČR GC20-04109J
Institutional support: RVO:68081707
Keywords : dynamic genome organization * epigenetic interactions * heterochromatin and self-organization * organizational and functional networks * gene activity oscillations * transposon-effected regulation * fluorescence microscopy
OECD category: Biochemistry and molecular biology
Impact factor: 5.6, year: 2022
Method of publishing: Open access
https://www.mdpi.com/1422-0067/24/3/2658
Permanent Link: https://hdl.handle.net/11104/0345685 - 3.0561805 - ÚFCH JH 2023 RIV US eng J - Journal Article
Sala, Leo Albert - Perečko, Tomáš - Mestek, O. - Pinkas, Dominik - Homola, T. - Kočišek, Jaroslav
Cisplatin-Cross-Linked DNA Origami Nanostructures for Drug Delivery Applications.
ACS Applied Nano Materials. Roč. 5, č. 9 (2022), s. 13267-13275. ISSN 2574-0970
R&D Projects: GA MŠMT(CZ) LM2018129; GA ČR GC20-04109J; GA MŠMT EF16_026/0008382
Grant - others:Ministerstvo školství, mládeže a tělovýchovy - GA MŠk(CZ) CZ.02.1.01/0.0/0.0/16_026/0008382
Institutional support: RVO:61388955 ; RVO:68081707 ; RVO:68378050
Keywords : atomic force microscopy * cisplatin * DNA nanotechnology * DNA origami * drug delivery * electron microscopy
OECD category: Physical chemistry; Physical chemistry (BFU-R); Cell biology (UMG-J)
Impact factor: 5.9, year: 2022
Method of publishing: Limited access
https://pubs.acs.org/doi/10.1021/acsanm.2c02976
Permanent Link: https://hdl.handle.net/11104/0334305File Download Size Commentary Version Access 0561805.pdf 4 5.4 MB Publisher’s postprint require - 4.0555576 - BFÚ 2022 RIV SE eng J - Journal Article
Vičar, Tomáš - Gumulec, J. - Kolář, R. - Kopečná, Olga - Pagáčová, Eva - Falková, Iva - Falk, Martin
DeepFoci: Deep learning-based algorithm for fast automatic analysis of DNA double-strand break ionizing radiation-induced foci.
Computational and Structural Biotechnology Journal. Roč. 19, DEC 2021 (2021), s. 6465-6480. ISSN 2001-0370. E-ISSN 2001-0370
R&D Projects: GA ČR GC20-04109J; GA ČR(CZ) GA19-09212S
Institutional support: RVO:68081707
Keywords : alternative splicing variant * complex cell responses * gamma-h2ax foci * chromatin-structure * h2ax phosphorylation * nanoscopy techniques * histone h2ax
OECD category: Biochemistry and molecular biology
Impact factor: 6.155, year: 2021
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S2001037021004840?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0330038 - 5.0554412 - BFÚ 2022 RIV CH eng J - Journal Article
Hahn, H. - Neitzel, Ch. - Kopečná, Olga - Heermann, D.W. - Falk, Martin - Hausmann, M.
Topological Analysis of gamma H2AX and MRE11 Clusters Detected by Localization Microscopy during X-ray-Induced DNA Double-Strand Break Repair.
Cancers (Basel). Roč. 13, č. 21 (2021), č. článku 5561. E-ISSN 2072-6694
R&D Projects: GA ČR GC20-04109J
Institutional support: RVO:68081707
Keywords : histone h2ax phosphorylation * complex cell responses * homologous recombination * nanoscopy techniques * pathway choice
OECD category: Oncology
Impact factor: 6.575, year: 2021
Method of publishing: Open access
https://www.mdpi.com/2072-6694/13/21/5561
Permanent Link: http://hdl.handle.net/11104/0329109 - 6.0553059 - BFÚ 2023 RIV CH eng J - Journal Article
Dobešová, Eva - Gier, T. - Kopečná, Olga - Pagáčová, Eva - Vicar, T. - Bestvater, F. - Toufar, Jiří - Bačíková, Alena - Kopel, P. - Fedr, Radek - Hildenbrand, G. - Falková, Iva - Falk, Martin - Hausmann, M.
Incorporation of Low Concentrations of Gold Nanoparticles: Complex Effects on Radiation Response and Fate of Cancer Cells.
Pharmaceutics. Roč. 14, č. 1 (2022), č. článku 166. E-ISSN 1999-4923
R&D Projects: GA ČR GC20-04109J; GA ČR(CZ) GA19-09212S
Institutional support: RVO:68081707
Keywords : histone h2ax phosphorylation * double-strand breaks * dna-damage * cellular uptake * dose enhancement * nanoscopy techniques * carcinoma cells * drug-delivery * repair
OECD category: Pharmacology and pharmacy
Impact factor: 5.4, year: 2022
Method of publishing: Open access
https://www.mdpi.com/1999-4923/14/1/166
Permanent Link: https://hdl.handle.net/11104/0340400 - 7.0542178 - BFÚ 2022 RIV CH eng J - Journal Article
Hausmann, M. - Falk, Martin - Neitzel, Ch. - Hofmann, A. - Biswas, A. - Gier, T. - Falková, Iva - Heermann, D.W. - Hildenbrand, G.
Elucidation of the Clustered Nano-Architecture of Radiation-Induced DNA Damage Sites and Surrounding Chromatin in Cancer Cells: A Single Molecule Localization Microscopy Approach.
International Journal of Molecular Sciences. Roč. 22, č. 7 (2021), č. článku 3636. E-ISSN 1422-0067
R&D Projects: GA ČR GC20-04109J
Institutional support: RVO:68081707
Keywords : topology of DNA double strand breaks * nano-architecture * ionizing radiation-induced foci (IRIF) * chromatin rearrangements after irradiation * single molecule localization microscopy (SMLM)
OECD category: Biochemistry and molecular biology
Impact factor: 6.208, year: 2021
Method of publishing: Open access
https://www.mdpi.com/1422-0067/22/7/3636
Permanent Link: http://hdl.handle.net/11104/0319654 - 8.0542166 - BFÚ 2022 RIV CH eng J - Journal Article
Falk, Martin - Hausmann, M.
A Paradigm Revolution or Just Better Resolution-Will Newly Emerging Superresolution Techniques Identify Chromatin Architecture as a Key Factor in Radiation-Induced DNA Damage and Repair Regulation?
Cancers (Basel). Roč. 13, č. 1 (2021), č. článku 18. E-ISSN 2072-6694
R&D Projects: GA ČR GC20-04109J; GA ČR(CZ) GA19-09212S
Institutional support: RVO:68081707
Keywords : double-strand-break * human transcriptome map * complex cell responses * homologous recombination * ionizing-radiation * pathway choice
OECD category: Oncology
Impact factor: 6.575, year: 2021
Method of publishing: Open access
https://www.mdpi.com/2072-6694/13/1/18
Permanent Link: http://hdl.handle.net/11104/0319644 - 9.0540504 - BFÚ 2021 RIV CH eng J - Journal Article
Svobodová Kovaříková, Alena - Bártová, Eva - Kovařík, Aleš - Lukášová, Emilie
Spatiotemporal Mislocalization of Nuclear Membrane-Associated Proteins in gamma-Irradiation-Induced Senescent Cells.
Cells. Roč. 9, č. 4 (2020), č. článku 999. E-ISSN 2073-4409
R&D Projects: GA ČR GC20-04109J
Institutional support: RVO:68081707
Keywords : lamin b receptor * dilated cardiomyopathy * cellular senescence * linc complex * nesprin-1 * heterochromatin
OECD category: Cell biology
Impact factor: 6.600, year: 2020
Method of publishing: Open access
https://www.mdpi.com/2073-4409/9/4/999
Permanent Link: http://hdl.handle.net/11104/0318126 - 10.0537435 - BFÚ 2021 RIV CH eng J - Journal Article
Hausmann, M. - Neitzel, Ch. - Bobkova, E. - Nagel, D. - Hofmann, A. - Chramko, T. - Smirnova, E. - Kopečná, Olga - Pagáčová, Eva - Boreyko, A. - Krasavin, E. - Falková, Iva - Heermann, D.W. - Pilarczyk, G. - Hildenbrand, G. - Bestvater, F. - Falk, Martin
Single Molecule Localization Microscopy Analyses of DNA-Repair Foci and Clusters Detected Along Particle Damage Tracks.
Frontiers in Physics. Roč. 8, č. 2020 (2020), č. článku 578662. ISSN 2296-424X. E-ISSN 2296-424X
R&D Projects: GA ČR GC20-04109J
Institutional support: RVO:68081707
Keywords : strand-break repair * complex cell responses * space radiation * alternative pathways * nanoscopy techniques * genomic instability * light-microscopy * high-let
OECD category: Physical chemistry
Impact factor: 3.560, year: 2020
Method of publishing: Open access
http://apps.webofknowledge.com/InboundService.do?customersID=Alerting&mode=FullRecord&IsProductCode=Yes&product=WOS&Init=Yes&Func=Frame&DestFail=http%3A%2F%2Fwww.webofknowledge.com&action=retrieve&SrcApp=Alerting&SrcAuth=Alerting&SID=F5ecl7TTnxXPl2FJDDH&UT=WOS%3A000591310500001
Permanent Link: http://hdl.handle.net/11104/0315158