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- 1.0584688 - ÚOCHB 2025 RIV US eng J - Journal Article
Fábián, Balázs - Javanainen, Matti
Diffusion Analyses along Mean and Gaussian-Curved Membranes with CurD.
Journal of Physical Chemistry Letters. Roč. 15, č. 11 (2024), s. 3214-3220. ISSN 1948-7185
R&D Projects: GA ČR(CZ) GX19-26854X
Institutional support: RVO:61388963
Keywords : coarse-grained model * lipid-bilayers * curvature
Impact factor: 5.7, year: 2022
Method of publishing: Limited access
https://doi.org/10.1021/acs.jpclett.4c00338
Permanent Link: https://hdl.handle.net/11104/0352761 - 2.0582992 - ÚFCH JH 2025 RIV NL eng J - Journal Article
Thakur, Garima Chand Nakul - Uday, Arunima - Cebecauer, Marek - Roos, W. H. - Cwiklik, Lukasz - Hof, Martin - Jurkiewicz, Piotr - Melcrová, Adéla
Charge of a transmembrane peptide alters its interaction with lipid membranes.
Colloids and Surfaces B-Biointerfaces. Roč. 235, MAR 2024 (2024), s. 113765. ISSN 0927-7765. E-ISSN 1873-4367
R&D Projects: GA ČR(CZ) GX19-26854X
Institutional support: RVO:61388955
Keywords : integral membrane protein * FRET-GP * AFM imaging
OECD category: Physical chemistry
Impact factor: 5.8, year: 2022
Method of publishing: Open access
Permanent Link: https://hdl.handle.net/11104/0351018File Download Size Commentary Version Access 0582992.pdf 0 5.1 MB open access Publisher’s postprint open-access - 3.0582943 - ÚOCHB 2025 RIV NL eng J - Journal Article
Thakur, G. C. N. - Uday, A. - Cebecauer, M. - Roos, W. H. - Cwiklik, Lukasz - Hof, M. - Jurkiewicz, P. - Melcrová, A.
Charge of a transmembrane peptide alters its interaction with lipid membranes.
Colloids and Surfaces B-Biointerfaces. Roč. 235, March (2024), č. článku 113765. ISSN 0927-7765. E-ISSN 1873-4367
R&D Projects: GA ČR(CZ) GX19-26854X
Institutional support: RVO:61388963
Keywords : Integral membrane protein * FRET-GP * AFM imaging * AFM nanoindentation * MD simulation
Impact factor: 5.8, year: 2022
Method of publishing: Open access
https://doi.org/10.1016/j.colsurfb.2024.113765
Permanent Link: https://hdl.handle.net/11104/0350989 - 4.0580130 - ÚFCH JH 2024 RIV US eng J - Journal Article
Thakur, Garima Chand Nakul - Uday, Arunima - Jurkiewicz, Piotr
FRET-GP A Local Measure of the Impact of Transmembrane Peptide on Lipids.
Langmuir. Roč. 39, č. 50 (2023), s. 18390-18402. ISSN 0743-7463
R&D Projects: GA ČR(CZ) GX19-26854X
Institutional support: RVO:61388955
Keywords : Fluorescence resonance energy transfer * Lipids * Membranes
OECD category: Physical chemistry
Impact factor: 3.9, year: 2022
Method of publishing: Limited access
Permanent Link: https://hdl.handle.net/11104/0348897File Download Size Commentary Version Access 0580130.pdf 0 5.5 MB Publisher’s postprint require - 5.0578251 - ÚOCHB 2025 RIV NL eng J - Journal Article
Saija, M. C. - Melcrová, A. - Pajerski, W. - Schachter, Itay - Javanainen, Matti - Cebecauer, M. - Cwiklik, Lukasz
Palmitoylation modifies transmembrane adaptor protein PAG for ordered lipid environment: A molecular dynamics simulation study.
Biophysical Chemistry. Roč. 304, January (2024), č. článku 107124. ISSN 0301-4622. E-ISSN 1873-4200
R&D Projects: GA ČR(CZ) GX19-26854X
Institutional support: RVO:61388963
Keywords : PAG * membranes * palmitoylation * lipid membrane phases * MD simulations
Impact factor: 3.8, year: 2022
Method of publishing: Limited access
https://doi.org/10.1016/j.bpc.2023.107124
Permanent Link: https://hdl.handle.net/11104/0347277 - 6.0578225 - ÚFCH JH 2025 RIV NL eng J - Journal Article
Saija, Maria Chiara - Melcrová, Adéla - Pajerski, Wojciech - Schachter, I. - Javanainen, M. - Cebecauer, Marek - Cwiklik, Lukasz
Palmitoylation modifies transmembrane adaptor protein PAG for ordered lipid environment: A molecular dynamics simulation study.
Biophysical Chemistry. Roč. 304, JAN 2024 (2024), č. článku 107124. ISSN 0301-4622. E-ISSN 1873-4200
R&D Projects: GA ČR(CZ) GX19-26854X
Institutional support: RVO:61388955
Keywords : PAG * membranes * Palmitoylation
OECD category: Physical chemistry
Impact factor: 3.8, year: 2022
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/pii/S0301462223001758
Permanent Link: https://hdl.handle.net/11104/0347250File Download Size Commentary Version Access 0578225.pdf 0 5.1 MB Publisher’s postprint require - 7.0574888 - ÚFCH JH 2024 RIV US eng J - Journal Article
Dudek, A. - Strugała-Danak, P. - Kral, Teresa - Hof, Martin - Pruchnik, H.
An analysis of interactions between three structurally diverse anthocyanidins, as well as their glucosides, and model biological membranes, albumin, and plasmid DNA.
Scientific Reports. Roč. 13, č. 1 (2023), č. článku 12883. ISSN 2045-2322. E-ISSN 2045-2322
R&D Projects: GA ČR(CZ) GX19-26854X
Institutional support: RVO:61388955
Keywords : anthocyanidins * analysis * DNA
OECD category: Physical chemistry
Impact factor: 4.6, year: 2022
Method of publishing: Open access
Permanent Link: https://hdl.handle.net/11104/0344815File Download Size Commentary Version Access 0574888.pdf 0 8.5 MB open access Publisher’s postprint open-access - 8.0572574 - ÚOCHB 2024 RIV US eng J - Journal Article
Yesylevskyy, Semen - Martinez-Seara, Hector - Jungwirth, Pavel
Curvature Matters: Modeling Calcium Binding to Neutral and Anionic Phospholipid Bilayers.
Journal of Physical Chemistry B. Roč. 127, č. 20 (2023), s. 4523-4531. ISSN 1520-6106. E-ISSN 1520-5207
R&D Projects: GA ČR(CZ) GX19-26854X
Institutional support: RVO:61388963
Keywords : molecular dynamics simulation * membrane curvature * lipid bilayers
OECD category: Physical chemistry
Impact factor: 3.3, year: 2022
Method of publishing: Open access
https://doi.org/10.1021/acs.jpcb.3c01962
Permanent Link: https://hdl.handle.net/11104/0343219 - 9.0572234 - ÚOCHB 2024 RIV US eng J - Journal Article
Košťál, Vojtěch - Mason, Philip E. - Martinez-Seara, Hector - Jungwirth, Pavel
Common Cations Are Not Polarizable: Effects of Dispersion Correction on Hydration Structures from Ab Initio Molecular Dynamics.
Journal of Physical Chemistry Letters. Roč. 14, č. 19 (2023), s. 4403-4408. ISSN 1948-7185
R&D Projects: GA ČR(CZ) GX19-26854X
Institutional support: RVO:61388963
Keywords : generalized gradient approximation * density functional theory * accurate description
OECD category: Physical chemistry
Impact factor: 5.7, year: 2022
Method of publishing: Open access
https://doi.org/10.1021/acs.jpclett.3c00856
Permanent Link: https://hdl.handle.net/11104/0342998 - 10.0570983 - ÚFCH JH 2024 RIV GB eng J - Journal Article
Varade, V. - Haider, Golam - Pirker, Luka - Panda, Jaganandha - Sýkora, Jan - Frank, Otakar - Kalbáč, Martin - Vejpravová, J.
Sulfur isotope engineering of exciton and lattice dynamics in MoS2 monolayers.
2D Materials. Roč. 10, č. 2 (2023), č. článku 025024. ISSN 2053-1583. E-ISSN 2053-1583
R&D Projects: GA ČR(CZ) GX20-08633X; GA ČR(CZ) GX19-26854X
Research Infrastructure: MGML - 90096
Institutional support: RVO:61388955
Keywords : excitons * isotope engineering * Raman spectroscopy * tip-enahnced Raman spectroscopy * two-dimensional materials
OECD category: Physical chemistry
Impact factor: 5.5, year: 2022
Method of publishing: Open access
Permanent Link: https://hdl.handle.net/11104/0342316File Download Size Commentary Version Access 0570983.pdf 2 3.3 MB open access Publisher’s postprint open-access