Search results
- 1.0550181 - MBÚ 2022 RIV NL eng J - Journal Article
Inomura, K. - Masuda, Takako - Eichner, Meri - Rabouille, S. - Zavřel, Tomáš - Červený, Jan - Vancová, Marie - Bernát, Gábor - Armin, G. - Claquin, P. - Kotabová, Eva - Stephan, S. - Suggett, D.J. - Deutsch, C. - Prášil, Ondřej
Quantifying Cyanothece growth under DIC limitation.
Computational and Structural Biotechnology Journal. Roč. 19, č. 2021 (2021), s. 6456-6464. ISSN 2001-0370. E-ISSN 2001-0370
R&D Projects: GA ČR(CZ) GA20-17627S; GA ČR(CZ) GA18-24397S; GA MŠMT(CZ) LM2018129
Research Infrastructure: Czech-BioImaging II - 90129
Institutional support: RVO:61388971 ; RVO:86652079 ; RVO:60077344
Keywords : Cyanothece * DIC * CO2 * Nitrogen fixation * Nitrate * Diurnal Cyanothece * Carbon * Photosynthesis * Quantitative model
OECD category: Microbiology; Microbiology (UEK-B); Cell biology (BC-A)
Impact factor: 6.155, year: 2021
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S2001037021005018?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0325969 - 2.0550065 - MBÚ 2022 RIV CH eng J - Journal Article
Polerecky, L. - Eichner, Meri - Masuda, Takako - Zavřel, Tomáš - Rabouille, S. - Campbell, D. A. - Halsey, K.
Calculation and Interpretation of Substrate Assimilation Rates in Microbial Cells Based on Isotopic Composition Data Obtained by nanoSIMS.
Frontiers in Microbiology. Roč. 12, NOV 30 2021 (2021), č. článku 621634. ISSN 1664-302X. E-ISSN 1664-302X
R&D Projects: GA ČR(CZ) GA20-17627S; GA ČR(CZ) GJ20-02827Y; GA MŠMT(CZ) EF16_026/0008413; GA ČR(CZ) GA18-24397S; GA MŠMT(CZ) EF16_027/0007990
Institutional support: RVO:61388971 ; RVO:86652079
Keywords : stable isotope probing * assimilation rates * storage inclusions * cell growth model
OECD category: Microbiology
Impact factor: 6.064, year: 2021
Method of publishing: Open access
https://hal.archives-ouvertes.fr/hal-03469894/
Permanent Link: http://hdl.handle.net/11104/0325915 - 3.0543490 - ÚVGZ 2022 RIV NL eng J - Journal Article
Zavřel, Tomáš - Schoffman, H. - Lukeš, Martin - Fedorko, Jan - Keren, N. - Červený, Jan
Monitoring fitness and productivity in cyanobacteria batch cultures.
Algal Research-Biomass Biofuels and Bioproducts. Roč. 56, JUN (2021), č. článku 102328. ISSN 2211-9264. E-ISSN 2211-9264
R&D Projects: GA MŠMT(CZ) LO1415; GA ČR(CZ) GA18-24397S; GA MŠMT(CZ) EF16_026/0008413; GA TA ČR(CZ) TN01000048
Research Infrastructure: CzeCOS III - 90123
Institutional support: RVO:86652079 ; RVO:61388971
Keywords : sp pcc 6803 * photosystem-ii * microalgae cultivation * dark respiration * growth-rate * light * phytoplankton * photosynthesis * fluorescence * algae * Batch cultivation * Cyanobacteria * Excitation-emission spectra * Fitness * Metal uptake * Photosynthesis
OECD category: Microbiology; Microbiology (MBU-M)
Impact factor: 5.276, year: 2021
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/pii/S2211926421001478?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0320687 - 4.0542611 - MBÚ 2022 RIV CH eng J - Journal Article
Bernát, Gábor - Zavřel, Tomáš - Kotabová, Eva - Kovács, L. - Steinbach, G. - Vörös, J. - Prášil, Ondřej - Somogyi, B. - Toth, V. R.
Photomorphogenesis in the Picocyanobacterium Cyanobium gracile Includes Increased Phycobilisome Abundance Under Blue Light, Phycobilisome Decoupling Under Near Far-Red Light, and Wavelength-Specific Photoprotective Strategies.
Frontiers in Plant Science. Roč. 12, MAR 18 2021 (2021), č. článku 612302. ISSN 1664-462X. E-ISSN 1664-462X
R&D Projects: GA ČR(CZ) GA20-17627S; GA ČR(CZ) GA18-24397S; GA MŠMT(CZ) EF16_026/0008413
Institutional support: RVO:61388971 ; RVO:86652079
Keywords : cyanobacteria * photosynthesis * light-quality acclimation * pigment composition * imbalance
OECD category: Microbiology; Plant sciences, botany (UEK-B)
Impact factor: 6.627, year: 2021
Method of publishing: Open access
https://www.frontiersin.org/articles/10.3389/fpls.2021.612302/full
Permanent Link: http://hdl.handle.net/11104/0319993 - 5.0542572 - ÚVGZ 2022 RIV CH eng J - Journal Article
Sukačová, Kateřina - Losak, P. - Brummer, V. - Máša, V. - Vicha, Daniel - Zavřel, Tomáš
Perspective Design of Algae Photobioreactor for Greenhouses-A Comparative Study.
Energies. Roč. 14, č. 5 (2021), č. článku 1338. E-ISSN 1996-1073
R&D Projects: GA MŠMT(CZ) EF16_026/0008413; GA ČR(CZ) GA18-24397S
Research Infrastructure: CzeCOS III - 90123
Institutional support: RVO:86652079
Keywords : microalgae * biomass * photobioreactors * power consumption * Chlorella * power input * sustainability * lipids * temperature stress * photoinhibition
OECD category: Energy and fuels
Impact factor: 3.252, year: 2021
Method of publishing: Open access
https://www.mdpi.com/1996-1073/14/5/1338
Permanent Link: http://hdl.handle.net/11104/0319958 - 6.0541527 - MBÚ 2022 RIV CH eng J - Journal Article
Polerecký, L. - Masuda, Takako - Eichner, Meri - Rabouille, S. - Vancová, Marie - Kienhuis, M. V. M. - Bernát, Gábor - Bonomi-Barufi, J. - Campbell, D. A. - Claquin, P. - Červený, Jan - Giordano, Mario - Kotabová, Eva - Kromkamp, J. - Lombardi, A. T. - Lukeš, Martin - Prášil, Ondřej - Stephan, S. - Suggett, D. - Zavřel, Tomáš - Halsey, K. H.
Temporal Patterns and Intra- and Inter-Cellular Variability in Carbon and Nitrogen Assimilation by the Unicellular Cyanobacterium Cyanothece sp. ATCC 51142.
Frontiers in Microbiology. Roč. 12, FEB 4 (2021), č. článku 620915. ISSN 1664-302X. E-ISSN 1664-302X
R&D Projects: GA MŠMT(CZ) LM2015062; GA MŠMT(CZ) EF16_026/0008413; GA ČR(CZ) GA18-24397S; GA ČR(CZ) GA20-17627S; GA ČR(CZ) GJ20-02827Y
Research Infrastructure: Czech-BioImaging - 90062
Institutional support: RVO:61388971 ; RVO:60077344 ; RVO:86652079
Keywords : Crocosphaera subtropica * Cyanothece * photosynthesis * carbon fixation * nitrogen fixation * nanoSIMS * tem
OECD category: Microbiology; Genetics and heredity (medical genetics to be 3) (BC-A); Microbiology (UEK-B)
Impact factor: 6.064, year: 2021
Method of publishing: Open access
https://www.frontiersin.org/articles/10.3389/fmicb.2021.620915/full
Permanent Link: http://hdl.handle.net/11104/0319085 - 7.0534211 - ÚVGZ 2021 RIV GB eng J - Journal Article
Keating, S. M. - Waltemath, D. - Koenig, M. - Zhang, F. - Draeger, A. - Chaouiya, C. - Bergmann, F. - Finney, A. - Gillespie, C. S. - Helikar, T. - Hoops, S. - Malik-Sheriff, R. S. - Moodie, S. L. - Moraru, I. I. - Myers, C. - Naldi, A. - Olivier, B. G. - Sahle, S. - Schaff, J. C. - Smith, L. P. - Swat, M. J. - Thieffry, D. - Watanabe, L. - Wilkinson, D. J. - Blinov, M. L. - Begley, K. - Faeder, J. R. - Gomez, H. F. - Hamm, T. M. - Inagaki, Y. - Liebermeister, W. - Lister, A. L. - Lucio, D. - Mjolsness, E. - Proctor, C. - Červený, Jan … Total 53 authors
SBML Level 3: an extensible format for the exchange and reuse of biological models.
Molecular Systems Biology. Roč. 16, č. 8 (2020), č. článku e9110. ISSN 1744-4292. E-ISSN 1744-4292
R&D Projects: GA MŠMT(CZ) LM2015055; GA ČR(CZ) GA18-24397S; GA MŠMT(CZ) EF16_026/0008413
Institutional support: RVO:86652079
Keywords : systems biology * markup language * simulation * standards * software * information * environment * annotation * repository * ontology * computational modeling * file format * interoperability * reproducibility * systems biology
OECD category: Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)
Impact factor: 11.429, year: 2020
Method of publishing: Open access
https://www.embopress.org/doi/full/10.15252/msb.20199110
Permanent Link: http://hdl.handle.net/11104/0312475 - 8.0504331 - ÚVGZ 2020 RIV GB eng J - Journal Article
Zavřel, Tomáš - Faizi, M. - Loureiro, C. - Poschmann, G. - Stuehler, K. - Sinětova, Maria A. - Zorina, A. - Steuer, R. - Červený, Jan
Quantitative insights into the cyanobacterial cell economy.
eLife. Roč. 8, feb (2019), č. článku e42508. ISSN 2050-084X. E-ISSN 2050-084X
R&D Projects: GA ČR(CZ) GA18-24397S
Research Infrastructure: CzeCOS II - 90061
Institutional support: RVO:86652079
Keywords : sp pcc 6803 * bacterial-growth laws * gene-expression * resource-allocation * chlorophyll fluorescence * trade-offs * light * cultivation * model * photobioreactor
OECD category: Microbiology
Impact factor: 7.080, year: 2019
Method of publishing: Open access
https://elifesciences.org/articles/42508
Permanent Link: http://hdl.handle.net/11104/0295991 - 9.0493286 - ÚVGZ 2019 RIV US eng J - Journal Article
Zavřel, Tomáš - Chmelík, Dominik - Sinětova, Maria A. - Červený, Jan
Spectrophotometric Determination of Phycobiliprotein Content in Cyanobacterium Synechocystis.
Jove-Journal of Visualized Experiments. Roč. 139, sep (2018), č. článku e58076. ISSN 1940-087X
R&D Projects: GA MŠMT(CZ) LO1415; GA ČR(CZ) GA18-24397S; GA MŠMT(CZ) LM2015055
Institutional support: RVO:86652079
Keywords : Phycobilisomes * phycobilins * phycocyanobilins * phycocyanin * allophycocyanin * pigments * light harvesting * protein * cyanobacteria * algae * spectrophotometry * extraction
OECD category: Biochemistry and molecular biology
Impact factor: 1.108, year: 2018
Permanent Link: http://hdl.handle.net/11104/0286674