Search results
- 1.0561666 - ÚFCH JH 2023 RIV GB eng J - Journal Article
Ragaller, F. - Andronico, L. - Sýkora, Jan - Kulig, W. - Rog, T. - Urem, Y. B. - Abhinav, Abhinav - Danylchuk, D. I. - Hof, Martin - Klymchenko, A. - Amaro, Mariana - Vattulainen, I. - Sezgin, E.
Dissecting the mechanisms of environment sensitivity of smart probes for quantitative assessment of membrane properties.
Open Biology. Roč. 12, č. 9 (2022), č. článku 220175. E-ISSN 2046-2441
R&D Projects: GA ČR(CZ) GX19-26854X
EU Projects: European Commission(XE) 860592 - PROTON
Institutional support: RVO:61388955
Keywords : environment-sensitive probes * spectralimaging * lipid saturation
OECD category: Physical chemistry
Impact factor: 5.8, year: 2022
Method of publishing: Open access
Permanent Link: https://hdl.handle.net/11104/0334190File Download Size Commentary Version Access 0561666.pdf 2 46.5 MB open access Publisher’s postprint open-access - 2.0536178 - ÚFCH JH 2021 RIV US eng J - Journal Article
Olžyńska, Agnieszka - Kulig, W. - Mikkolainen, H. - Czerniak, T. - Jurkiewicz, Piotr - Cwiklik, Lukasz - Rog, T. - Hof, Martin - Jungwirth, Pavel - Vattulainen, I.
Tail-Oxidized Cholesterol Enhances Membrane Permeability for Small Solutes.
Langmuir. Roč. 36, č. 35 (2020), s. 10438-10447. ISSN 0743-7463
R&D Projects: GA ČR(CZ) GX19-26854X; GA ČR(CZ) GA18-26751S; GA ČR(CZ) GA17-06792S
Institutional support: RVO:61388955 ; RVO:61388963
Keywords : molecular-dynamics simulations * alkyl chain unsaturation * atom force-field * lipid-bilayer * phospholipids * liposomes * oxidation * translocation * transitions * oxysterols
OECD category: Physical chemistry; Physical chemistry (UOCHB-X)
Impact factor: 3.882, year: 2020
Method of publishing: Open access
Permanent Link: http://hdl.handle.net/11104/0313993File Download Size Commentary Version Access 0536178.pdf 3 2.6 MB open access Publisher’s postprint open-access - 3.0495905 - ÚOCHB 2019 RIV NL eng J - Journal Article
Mobarak, E. - Javanainen, Matti - Kulig, W. - Honigmann, A. - Sezgin, E. - Aho, N. - Eggeling, Ch. - Rog, T. - Vattulainen, I.
How to minimize dye-induced perturbations while studying biomembrane structure and dynamics: PEG linkers as a rational alternative.
Biochimica Et Biophysica Acta-Biomembranes. Roč. 1860, č. 11 (2018), s. 2436-2445. ISSN 0005-2736. E-ISSN 1879-2642
Institutional support: RVO:61388963
Keywords : fluorescent probe * PEG linker * lipid membrane * atomistic simulation * molecular dynamics simulation * super-resolution microscopy
OECD category: Physical chemistry
Impact factor: 3.790, year: 2018
https://www.sciencedirect.com/science/article/pii/S0005273618301986?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0288779 - 4.0489875 - ÚOCHB 2019 RIV US eng J - Journal Article
Kulig, W. - Mikkolainen, H. - Olžyńska, A. - Jurkiewicz, P. - Cwiklik, Lukasz - Hof, M. - Vattulainen, I. - Jungwirth, Pavel - Rog, T.
Bobbing of Oxysterols: Molecular Mechanism for Translocation of Tail-Oxidized Sterols through Biological Membranes.
Journal of Physical Chemistry Letters. Roč. 9, č. 5 (2018), s. 1118-1123. ISSN 1948-7185
R&D Projects: GA ČR(CZ) GBP208/12/G016; GA MŠMT(CZ) EF16_019/0000729
Institutional support: RVO:61388963
Keywords : oxysterols * membranes * molecular dynamics
OECD category: Physical chemistry
Impact factor: 7.329, year: 2018
Permanent Link: http://hdl.handle.net/11104/0284191 - 5.0487732 - ÚFCH JH 2019 RIV US eng J - Journal Article
Kulig, W. - Mikkolainen, H. - Olžyńska, Agnieszka - Jurkiewicz, Piotr - Cwiklik, Lukasz - Hof, Martin - Vattulainen, I. - Jungwirth, P. - Rog, T.
Bobbing of Oxysterols: Molecular Mechanism for Translocation of Tail-Oxidized Sterols through Biological Membranes.
Journal of Physical Chemistry Letters. Roč. 9, č. 5 (2018), s. 1118-1123. ISSN 1948-7185
R&D Projects: GA ČR(CZ) GBP208/12/G016; GA MŠMT(CZ) EF16_019/0000729
Institutional support: RVO:61388955
Keywords : biological membranes * alcohols * cell membranes
OECD category: Physical chemistry
Impact factor: 7.329, year: 2018
Permanent Link: http://hdl.handle.net/11104/0282365File Download Size Commentary Version Access 0487732.pdf 11 410 KB Publisher’s postprint require - 6.0475321 - ÚOCHB 2018 RIV NL eng J - Journal Article
Manna, M. - Javanainen, M. - Martinez-Seara Monne, Hector - Gabius, H. J. - Rog, T. - Vattulainen, I.
Long-chain GM1 gangliosides alter transmembrane domain registration through interdigitation.
Biochimica Et Biophysica Acta-Biomembranes. Roč. 1859, č. 5 (2017), s. 870-878. ISSN 0005-2736. E-ISSN 1879-2642
Institutional support: RVO:61388963
Keywords : glycosphingolipid * cholesterol * membrane domain * membrane registry * molecular dynamics * computer simulations
OECD category: Physical chemistry
Impact factor: 3.438, year: 2017
Permanent Link: http://hdl.handle.net/11104/0272153 - 7.0472250 - ÚOCHB 2017 RIV IE eng J - Journal Article
Kulig, W. - Cwiklik, Lukasz - Jurkiewicz, P. - Rog, T. - Vattulainen, I.
Cholesterol oxidation products and their biological importance.
Chemistry and Physics of Lipids. Roč. 199, Sep (2016), s. 144-160. ISSN 0009-3084. E-ISSN 1873-2941
R&D Projects: GA ČR(CZ) GBP208/12/G016
Institutional support: RVO:61388963
Keywords : cholesterol * oxidation * oxysterols * biological membranes * biophysical properties
Subject RIV: CF - Physical ; Theoretical Chemistry
Impact factor: 3.361, year: 2016
Permanent Link: http://hdl.handle.net/11104/0269554 - 8.0468638 - ÚFCH JH 2017 RIV IE eng J - Journal Article
Kulig, W. - Cwiklik, Lukasz - Jurkiewicz, Piotr - Rog, T. - Vattulainen, I.
Cholesterol oxidation products and their biological importance.
Chemistry and Physics of Lipids. Roč. 199, SI (2016), s. 144-160. ISSN 0009-3084. E-ISSN 1873-2941
R&D Projects: GA ČR(CZ) GBP208/12/G016; GA ČR GA15-14292S
Institutional support: RVO:61388955
Keywords : cholesterol * oxidation * oxysterols
Subject RIV: CF - Physical ; Theoretical Chemistry
Impact factor: 3.361, year: 2016
Permanent Link: http://hdl.handle.net/11104/0266444File Download Size Commentary Version Access 0468638.pdf 7 2.8 MB Publisher’s postprint require - 9.0443291 - ÚFCH JH 2016 RIV US eng J - Journal Article
Kulig, W. - Olžyńska, Agnieszka - Jurkiewicz, Piotr - Kantola, A. M. - Komulainen, S. - Manna, M. - Pourmousa, M. - Vazdar, M. - Cwiklik, Lukasz - Rog, T. - Khelashvili, G. - Harries, D. - Telkki, V. - V. - Hof, Martin - Vattulainen, I. - Jungwirth, Pavel
Cholesterol under oxidative stress — How lipid membranes sense oxidation as cholesterol is being replaced by oxysterols.
Free Radical Biology and Medicine. Roč. 84, JUL 2015 (2015), s. 30-41. ISSN 0891-5849. E-ISSN 1873-4596
R&D Projects: GA ČR GBP208/12/G016
Institutional support: RVO:61388955 ; RVO:61388963
Keywords : phospholipid bilayers * oxysterols * molecular dynamics simulations
Subject RIV: CF - Physical ; Theoretical Chemistry
Impact factor: 5.784, year: 2015
Permanent Link: http://hdl.handle.net/11104/0246022File Download Size Commentary Version Access 0443291.pdf 5 2.4 MB Publisher’s postprint require - 10.0435887 - ÚFCH JH 2016 RIV NL eng J - Journal Article
Kulig, W. - Jurkiewicz, Piotr - Olžyńska, Agnieszka - Tynkkynen, J. - Javanainen, M. - Manna, M. - Rog, T. - Hof, Martin - Vattulainen, I. - Jungwirth, Pavel
Experimental determination and computational interpretation of biophysical properties of lipid bilayers enriched by cholesteryl hemisuccinate.
Biochimica Et Biophysica Acta-Biomembranes. Roč. 1848, č. 2 (2015), s. 422-432. ISSN 0005-2736. E-ISSN 1879-2642
R&D Projects: GA ČR GBP208/12/G016
Institutional support: RVO:61388955 ; RVO:61388963
Keywords : Time-dependent fluorescence shift * Molecular dynamics simulations * Cholesterol-mimicking detergents
Subject RIV: CF - Physical ; Theoretical Chemistry
Impact factor: 3.687, year: 2015
Permanent Link: http://hdl.handle.net/11104/0239787