Search results
- 1.0584639 - MBÚ 2025 RIV US eng J - Journal Article
Smirnova, Anna - Hronová, Vladislava - Mohammad, Mahabub Pasha - Herrmannová, Anna - Gunišová, Stanislava - Petráčková, Denisa - Halada, Petr - Coufal, Štěpán - Swirski, M. - Rendleman, J. - Jendruchová, Kristýna - Hatzoglou, M. - Beznosková, Petra - Vogel, C. - Valášek, Leoš Shivaya
Stem-loop-induced ribosome queuing in the uORF2/ATF4 overlap fine-tunes stress-induced human ATF4 translational control.
Cell Reports. Roč. 43, č. 4 (2024), s. 113976. ISSN 2211-1247. E-ISSN 2211-1247
R&D Projects: GA ČR(CZ) GX19-25821X; GA MŠMT(CZ) EH22_008/0004575
Research Infrastructure: CIISB III - 90242
Institutional support: RVO:61388971
Keywords : ribosome * factor 4 (ATF4) * stress respon * ORF2/ATF4 overlap
OECD category: Cell biology
Impact factor: 8.8, year: 2022
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S2211124724003048?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0352526File Download Size Commentary Version Access Stem-loop-induced ribosome queuing in the uORF2-ATF4 overlap fine-tunes stress-induced human ATF4 translational control.pdf 2 4.1 MB Publisher’s postprint open-access
Research data: Mendeley data - 2.0547363 - MBÚ 2022 RIV GB eng J - Journal Article
Mohammad, Mahabub Pasha - Smirnova, Anna - Gunišová, Stanislava - Valášek, Leoš Shivaya
eIF4G is retained on ribosomes elongating and terminating on short upstream ORFs to control reinitiation in yeast.
Nucleic Acids Research. Roč. 49, č. 15 (2021), s. 8743-8756. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA ČR(CZ) GX19-25821X
Institutional support: RVO:61388971
Keywords : eukaryotic translation initiation * messenger-rna * re-initiation * promote * gcn4 * complex * 4g * binding * domain * perspective
OECD category: Microbiology
Impact factor: 19.160, year: 2021
Method of publishing: Open access
https://academic.oup.com/nar/article/49/15/8743/6342458
Permanent Link: http://hdl.handle.net/11104/0323605 - 3.0533104 - MBÚ 2021 RIV US eng J - Journal Article
Wagner, Susan - Herrmannová, Anna - Hronová, Vladislava - Gunišová, Stanislava - Sen, N. D. - Hannan, R. D. - Hinnebusch, A. G. - Shirokikh, N. E. - Preiss, T. - Valášek, Leoš Shivaya
Selective Translation Complex Profiling Reveals Staged Initiation and Co-translational Assembly of Initiation Factor Complexes.
Molecular Cell. Roč. 79, č. 4 (2020), s. 546-560. ISSN 1097-2765. E-ISSN 1097-4164
R&D Projects: GA ČR(CZ) GX19-25821X
EU Projects: Wellcome Trust(CZ) 090812/B/09/Z
Institutional support: RVO:61388971
Keywords : short upstream orfs * gcn4 messenger-rna * in-vivo * multifactor complex * start-codon * read alignment * reinitiation * eif3 * ribosomes
OECD category: Biochemistry and molecular biology
Impact factor: 17.970, year: 2020
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S1097276520303890?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0311594 - 4.0519732 - MBÚ 2020 RIV GB eng J - Journal Article
Poncová, Kristýna - Wagner, Susan - Jansen, Myrte Esmeralda - Beznosková, Petra - Gunišová, Stanislava - Herrmannová, Anna - Zeman, Jakub - Dong, J.S. - Valášek, Leoš Shivaya
uS3/Rps3 controls fidelity of translation termination and programmed stop codon readthrough in co-operation with eIF3.
Nucleic Acids Research. Roč. 47, č. 21 (2019), s. 11326-11343. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA ČR(CZ) GA18-02014S
Institutional support: RVO:61388971
Keywords : messenger-rna recruitment * ribosomal-protein s3 * initiation-factor 3
OECD category: Microbiology
Impact factor: 11.502, year: 2019
Method of publishing: Open access
https://academic.oup.com/nar/article/47/21/11326/5603221
Permanent Link: http://hdl.handle.net/11104/0304727File Download Size Commentary Version Access 128_uS3_Rps3 controls fidelity of translation termination.pdf 3 9.1 MB Publisher’s postprint require - 5.0488819 - MBÚ 2019 RIV GB eng J - Journal Article
Gunišová, Stanislava - Hronová, Vladislava - Mohammad, Mahabub Pasha - Hinnebusch, A.G. - Valášek, Leoš Shivaya
Please do not recycle! Translation reinitiation in microbes and higher eukaryotes.
FEMS Microbiology Reviews. Roč. 42, č. 2 (2018), s. 165-192. ISSN 0168-6445. E-ISSN 1574-6976
R&D Projects: GA ČR GA15-10116S
EU Projects: Wellcome Trust(GB) 090812/B/09/Z
Institutional support: RVO:61388971
Keywords : translation reinitiation * termination-reinitiation * uORF
OECD category: Biochemistry and molecular biology
Impact factor: 11.524, year: 2018
Permanent Link: http://hdl.handle.net/11104/0283354File Download Size Commentary Version Access Please do not recycle. Translation reinitiation in microbes and higher eukaryotes (2).pdf 3 1.6 MB Author´s preprint require - 6.0483845 - MBÚ 2018 RIV US eng J - Journal Article
Hronová, Vladislava - Mohammad, Mahabub Pasha - Wagner, Susan - Pánek, Josef - Gunišová, Stanislava - Zeman, Jakub - Poncová, Kristýna - Valášek, Leoš Shivaya
Does eIF3 promote reinitiation after translation of short upstream ORFs also in mammalian cells?
RNA biology. Roč. 14, č. 12 (2017), s. 1660-1667. ISSN 1547-6286. E-ISSN 1555-8584
R&D Projects: GA ČR GA15-10116S
Institutional support: RVO:61388971
Keywords : ATF4 * eIF3 * GCN4
OECD category: Developmental biology
Impact factor: 5.216, year: 2017
Permanent Link: http://hdl.handle.net/11104/0279002 - 7.0482857 - MBÚ 2018 RIV GB eng J - Journal Article
Valášek, Leoš - Zeman, Jakub - Wagner, Susan - Beznosková, Petra - Pavlíková, Zuzana - Mohammad, Mahabub Pasha - Hronová, Vladislava - Herrmannová, Anna - Hashem, Y. - Gunišová, Stanislava
Embraced by eIF3: structural and functional insights into the roles of eIF3 across the translation cycle.
Nucleic Acids Research. Roč. 45, č. 19 (2017), s. 10948-10968. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA ČR(CZ) GA17-06238S
EU Projects: Wellcome Trust(GB) 090812/B/09/A
Institutional support: RVO:61388971
Keywords : INITIATION-FACTOR 3 * OPEN READING FRAMES * MESSENGER-RNA RECRUITMENT
OECD category: Microbiology
Impact factor: 11.561, year: 2017
Permanent Link: http://hdl.handle.net/11104/0278248File Download Size Commentary Version Access 128_Embraced by eIF3 structural and functional.pdf 3 7.5 MB Publisher’s postprint require - 8.0474226 - MBÚ 2018 RIV GB eng J - Journal Article
Mohammad, Mahabub Pasha - Munzarová Pondělíčková, Vanda - Zeman, Jakub - Gunišová, Stanislava - Valášek, Leoš Shivaya
In vivo evidence that eIF3 stays bound to ribosomes elongating and terminating on short upstream ORFs to promote reinitiation.
Nucleic Acids Research. Roč. 45, č. 5 (2017), s. 2658-2674. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA ČR GA15-10116S
EU Projects: Wellcome Trust(GB) 090812/B/09/A
Institutional support: RVO:61388971
Keywords : OPEN READING FRAMES * MESSENGER-RNA RECRUITMENT * EUKARYOTIC TRANSLATION INITIATION
OECD category: Microbiology
Impact factor: 11.561, year: 2017
Permanent Link: http://hdl.handle.net/11104/0271342File Download Size Commentary Version Access 128_In vivo evidence that eIF3 stays.pdf 4 1.3 MB Publisher’s postprint require - 9.0460004 - MBÚ 2017 RIV US eng J - Journal Article
Beznosková, Petra - Gunišová, Stanislava - Valášek, Leoš Shivaya
Rules of UGA-N decoding by near-cognate tRNAs and analysis of readthrough on short uORFs in yeast.
RNA. Roč. 22, č. 3 (2016), s. 456-466. ISSN 1355-8382. E-ISSN 1469-9001
R&D Projects: GA ČR GAP305/12/0480
Institutional support: RVO:61388971
Keywords : programmed stop codon readthrough * termination * eRF1
Subject RIV: CE - Biochemistry
Impact factor: 4.605, year: 2016
Permanent Link: http://hdl.handle.net/11104/0260144File Download Size Commentary Version Access 128_Rules of UGA-N decoding by near-cognate.pdf 3 730.8 KB Publisher’s postprint require - 10.0459969 - MBÚ 2017 RIV US eng J - Journal Article
Gunišová, Stanislava - Beznosková, Petra - Mohammad, Mahabub Pasha - Vlčková, Vladislava - Valášek, Leoš Shivaya
In-depth analysis of cis-determinants that either promote or inhibit reinitiation on GCN4 mRNA after translation of its four short uORFs.
RNA. Roč. 22, č. 4 (2016), s. 542-558. ISSN 1355-8382. E-ISSN 1469-9001
R&D Projects: GA ČR(CZ) GAP305/11/0172
Institutional support: RVO:61388971
Keywords : translational control * reinitiation * uORF
Subject RIV: CE - Biochemistry
Impact factor: 4.605, year: 2016
Permanent Link: http://hdl.handle.net/11104/0260131File Download Size Commentary Version Access k128_In-depth analysis of cis-determinants that either.pdf 3 602.4 KB Publisher’s postprint require