Search results
- 1.0598506 - ÚPT 2025 RIV NL eng J - Journal Article
Parobková, V. - Holub, D. - Kizovský, Martin - Kalčíková, G. - Rozman, U. - Urík, M. - Novotný, K. - Samek, Ota - Zikmund, T. - Pořízka, P. - Kaiser, J.
Raman microspectroscopy and laser-induced breakdown spectroscopy for the analysis of polyethylene microplastics in human soft tissues.
Heliyon. Roč. 10, č. 18 (2024), č. článku e37844. ISSN 2405-8440. E-ISSN 2405-8440
R&D Projects: GA TA ČR(CZ) SS06020224
Grant - others:AV ČR(CZ) StrategieAV21/27
Program: StrategieAV
Research Infrastructure: Czech-BioImaging III - 90250
Institutional support: RVO:68081731
Keywords : Health hazards * Exposure * Plastic pollution * Polyethylene * Microplastics * Tissue analysis * Human tonsils * Raman spectroscopy * Laser-induced breakdown spectroscopy * LIBS
OECD category: Optics (including laser optics and quantum optics)
Impact factor: 3.4, year: 2023 ; AIS: 0.615, rok: 2023
Method of publishing: Open access
Result website:
https://www.sciencedirect.com/science/article/pii/S2405844024138753DOI: https://doi.org/10.1016/j.heliyon.2024.e37844
Permanent Link: https://hdl.handle.net/11104/0356168Research data: Zenodo - 2.0588338 - ÚPT 2025 RIV DE eng J - Journal Article
Lee, K. S. - Landry, Z. - Athar, A. - Alcolombri, U. - Ayutthaya, P. P. N. - Berry, D. - de Bettignies, P. - Cheng, J.-X. - Csucs, G. - Cui, L. - Deckert, V. - Dieing, T. - Dionne, J. - Doskočil, Ondřej - D'Souza, G. - Garcia-Timermans, C. - Gierlinger, N. - Goda, K. - Hatzenpichler, R. - Henshaw, R. J. - Huang, W. E. - Iermak, I. - Ivleva, N. P. - Kneipp, J. - Kubryk, P. - Pilát, Zdeněk - Plešinger, Filip - Samek, Ota … Total 61 authors
MicrobioRaman: an open-access web repository for microbiological Raman spectroscopy data.
Nature Microbiology. Roč. 9, č. 5 (2024), s. 1152-1156. ISSN 2058-5276. E-ISSN 2058-5276
Research Infrastructure: Czech-BioImaging III - 90250
Institutional support: RVO:68081731
Impact factor: 20.5, year: 2023 ; AIS: 8.454, rok: 2023
Method of publishing: Limited access
Result website:
https://www.nature.com/articles/s41564-024-01656-3DOI: https://doi.org/10.1038/s41564-024-01656-3
Permanent Link: https://hdl.handle.net/11104/0355368 - 3.0587448 - ÚPT 2025 RIV NL eng J - Journal Article
Khan, A. - Qadeer, A. - Wajid, A. - Ullah, Q. - Rahman, S. U. - Ullah, K. - Safi, S. Z. - Tichá, L. - Skaličková, S. - Chilala, P. - Bernatová, Silvie - Samek, Ota - Horký, P.
Microplastics in animal nutrition: Occurrence, spread, and hazard in animals.
Journal of Agriculture and Food Research. Roč. 17, September (2024), č. článku 101258. ISSN 2666-1543. E-ISSN 2666-1543
R&D Projects: GA TA ČR(CZ) SS06020224
Research Infrastructure: Czech-BioImaging III - 90250
Institutional support: RVO:68081731
Keywords : Microplastic * Environmental contaminant * Gastrointestinal tract * Hazard
OECD category: Agricultural biotechnology and food biotechnology
Impact factor: 4.8, year: 2023
Method of publishing: Open access
Result website:
https://www.sciencedirect.com/science/article/pii/S2666154324002953DOI: https://doi.org/10.1016/j.jafr.2024.101258
Permanent Link: https://hdl.handle.net/11104/0354645 - 4.0579195 - ÚPT 2024 RIV NL eng J - Journal Article
Tarbajová, V. - Koláčková, M. - Chaloupsky, P. - Dobešová, M. - Cápal, Petr - Pilát, Zdeněk - Samek, Ota - Zemánek, Pavel - Švec, P. - Skopalová Štěrbová, D. - Vaculovičová, M. - Richtera, L. - Pérez-de-Mora, A. - Adam, V. - Húska, D.
Physiological and transcriptome profiling of Chlorella sorokiniana: A study on azo dye wastewater decolorization.
Journal of Hazardous Materials. Roč. 460, 15 October (2023), č. článku 132450. ISSN 0304-3894. E-ISSN 1873-3336
Institutional support: RVO:68081731 ; RVO:61389030
Keywords : pigment * Microalgae * bioremediation * RNA-seq * Raman micro-spectroscopy * Fourier transform infrared spectroscopy
OECD category: Analytical chemistry; Environmental sciences (social aspects to be 5.7) (UEB-Q)
Impact factor: 12.2, year: 2023 ; AIS: 1.947, rok: 2023
Method of publishing: Limited access
Result website:
https://www.sciencedirect.com/science/article/pii/S0304389423017338DOI: https://doi.org/10.1016/j.jhazmat.2023.132450
Permanent Link: https://hdl.handle.net/11104/0348044 - 5.0579192 - ÚPT 2024 RIV US eng J - Journal Article
Vaculík, Ondřej - Bernatová, Silvie - Rebrošová, K. - Samek, Ota - Šilhan, Lukáš - Růžička, F. - Šerý, Mojmír - Šiler, Martin - Ježek, Jan - Zemánek, Pavel
Rapid identification of pathogens in blood serum via Raman tweezers in combination with advanced processing methods.
Biomedical Optics Express. Roč. 14, č. 12 (2023), s. 6410-6421. ISSN 2156-7085. E-ISSN 2156-7085
R&D Projects: GA MPO(CZ) FV40455; GA TA ČR(CZ) FW06010453; GA MZd(CZ) NU21-05-00341
Institutional support: RVO:68081731
Keywords : Raman tweezers * blood serum * Raman spectroscopy * bloodstream infections * diagnostics * sepsis
OECD category: Optics (including laser optics and quantum optics)
Impact factor: 2.9, year: 2023 ; AIS: 0.719, rok: 2023
Method of publishing: Open access
Result website:
https://opg.optica.org/boe/fulltext.cfm?uri=boe-14-12-6410&id=542842DOI: https://doi.org/10.1364/BOE.503628
Permanent Link: https://hdl.handle.net/11104/0348043 - 6.0577394 - ÚPT 2024 RIV CH eng J - Journal Article
Siems, K. - Runzheimer, K. - Rebrošová, K. - Etzbach, L. - Auerhammer, A. - Rehm, A. - Schwengers, O. - Šiler, Martin - Samek, Ota - Růžička, F. - Moeller, R.
Identification of staphyloxanthin and derivates in yellow-pigmented Staphylococcus capitis subsp. capitis.
Frontiers in Microbiology. Roč. 14, 29 September (2023), č. článku 1272734. ISSN 1664-302X. E-ISSN 1664-302X
R&D Projects: GA MZd(CZ) NU21-05-00341
Institutional support: RVO:68081731
Keywords : Staphylococcus capitis * staphyloxanthin * coagulase-negative staphylococci (CoNS) * carotenoids * bacterial pigments
OECD category: Microbiology
Impact factor: 4, year: 2023 ; AIS: 1.049, rok: 2023
Method of publishing: Open access
Result website:
https://www.frontiersin.org/articles/10.3389/fmicb.2023.1272734/fullDOI: https://doi.org/10.3389/fmicb.2023.1272734
Permanent Link: https://hdl.handle.net/11104/0348042 - 7.0574930 - ÚPT 2024 RIV US eng J - Journal Article
Rebrošová, K. - Bernatová, Silvie - Šiler, Martin - Mašek, Jan - Samek, Ota - Ježek, Jan - Kizovský, Martin - Holá, V. - Zemánek, Pavel - Růžička, F.
Rapid Identification of Pathogens Causing Bloodstream Infections by Raman Spectroscopy and Raman Tweezers.
Microbiology Spectrum. Roč. 11, č. 3 (2023), č. článku e0002823. ISSN 2165-0497. E-ISSN 2165-0497
R&D Projects: GA MZd(CZ) NU21-05-00341; GA MŠMT EF15_003/0000476; GA MŠMT(CZ) LO1212; GA MŠMT ED0017/01/01
Research Infrastructure: Czech-BioImaging III - 90250
Institutional support: RVO:68081731 ; RVO:68081707
Keywords : Raman spectroscopy * bloodstream infections * diagnostics * sepsis * bacteria * Candida * Raman tweezers
OECD category: Optics (including laser optics and quantum optics); Microbiology (BFU-R)
Impact factor: 3.7, year: 2023 ; AIS: 1.02, rok: 2023
Method of publishing: Open access
Result website:
https://journals.asm.org/doi/10.1128/spectrum.00028-23DOI: https://doi.org/10.1128/spectrum.00028-23
Permanent Link: https://hdl.handle.net/11104/0344987 - 8.0570271 - ÚPT 2024 RIV CH eng J - Journal Article
Benešová, Markéta - Bernatová, Silvie - Mika, Filip - Pokorná, Zuzana - Ježek, Jan - Šiler, Martin - Samek, Ota - Růžička, F. - Rebrošová, K. - Zemánek, Pavel - Pilát, Zdeněk
SERS-Tags: Selective Immobilization and Detection of Bacteria by Strain-Specific Antibodies and Surface-Enhanced Raman Scattering.
Biosensors. Roč. 13, č. 2 (2023), č. článku 182. E-ISSN 2079-6374
R&D Projects: GA MZd(CZ) NU21-05-00341
Grant - others:AV ČR(CZ) MSM100652101
Program: Program na podporu mezinárodní spolupráce začínajících výzkumných pracovníků
Research Infrastructure: Czech-BioImaging III - 90250
Institutional support: RVO:68081731
Keywords : SERS-tag * Escherichia coli * sandwich immunoassay * single-cell detection
OECD category: Microbiology
Impact factor: 4.9, year: 2023 ; AIS: 0.765, rok: 2023
Method of publishing: Open access
Result website:
https://www.mdpi.com/2079-6374/13/2/182DOI: https://doi.org/10.3390/bios13020182
Permanent Link: https://hdl.handle.net/11104/0344482 - 9.0565479 - ÚPT 2024 RIV GB eng J - Journal Article
Pořízka, P. - Brunnbauer, L. - Porkert, M. - Rozman, U. - Marolt, G. - Holub, D. - Kizovský, Martin - Benešová, Markéta - Samek, Ota - Limbeck, A. - Kaiser, J. - Kalčíková, G.
Laser-based techniques: Novel tools for the identification and characterization of aged microplastics with developed biofilm.
Chemosphere. Roč. 313, February (2023), č. článku 137373. ISSN 0045-6535. E-ISSN 1879-1298
Research Infrastructure: Czech-BioImaging III - 90250
Institutional support: RVO:68081731
Keywords : Ageing * Biofilm * Detection * Microplastics * Spectroscopic methods
OECD category: Environmental sciences (social aspects to be 5.7)
Impact factor: 8.1, year: 2023 ; AIS: 1.217, rok: 2023
Method of publishing: Open access
Result website:
https://www.sciencedirect.com/science/article/pii/S0045653522038668DOI: https://doi.org/10.1016/j.chemosphere.2022.137373
Permanent Link: https://hdl.handle.net/11104/0337019 - 10.0565445 - ÚPT 2023 RIV CH eng J - Journal Article
Rebrošová, K. - Samek, Ota - Kizovský, Martin - Bernatová, Silvie - Holá, V. - Růžička, F.
Raman Spectroscopy - A Novel Method for Identification and Characterization of Microbes on a Single-Cell Level in Clinical Settings.
Frontiers in Cellular and Infection Microbiology. Roč. 12, 22 April (2022), č. článku 866463. ISSN 2235-2988. E-ISSN 2235-2988
R&D Projects: GA MZd(CZ) NU21-05-00341
Institutional support: RVO:68081731
Keywords : Raman spectroscopy * Raman tweezers * identification of microorganisms * antimicrobial resistance * microfluidic devices * magnetic beads * diagnostics
OECD category: Optics (including laser optics and quantum optics)
Impact factor: 5.7, year: 2022 ; AIS: 1.191, rok: 2022
Method of publishing: Open access
Result website:
https://www.frontiersin.org/articles/10.3389/fcimb.2022.866463/fullDOI: https://doi.org/10.3389/fcimb.2022.866463
Permanent Link: https://hdl.handle.net/11104/0336976File Download Size Commentary Version Access 0565445.pdf 0 1.3 MB OA - CC BY 4.0 https://creativecommons.org/licenses/by/4.0/ Publisher’s postprint open-access