Search results
- 1.0536273 - ÚVGZ 2022 RIV NL eng C - Conference Paper (international conference)
Troják, M. - Šafránek, D. - Brim, L. - Šalagovič, Jakub - Červený, Jan
Executable Biochemical Space for Specification and Analysis of Biochemical Systems.
ELECTRONIC NOTES IN THEORETICAL COMPUTER SCIENCE. Freiburg: Elsevier, 2020, s. 91-116. ISSN 1571-0661.
[9th International Workshop on Static Analysis and Systems Biology (SASB). Freiburg (DE), 28.08.2018-28.08.2018]
R&D Projects: GA MŠMT(CZ) LM2015055
Institutional support: RVO:86652079
Keywords : annotation * simulation * framework * semantics * kappa * rule-based modelling * formal specification * static analysis
OECD category: Environmental biotechnology
Result website:
https://www.sciencedirect.com/science/article/pii/S1571066120300347?via%3DihubDOI: https://doi.org/10.1016/j.entcs.2020.06.006
Permanent Link: http://hdl.handle.net/11104/0314081 - 2.0497427 - ÚVGZ 2019 RIV RO eng C - Conference Paper (international conference)
Beneš, N. - Brim, L. - Pastva, S. - Šafránek, D. - Troják, M. - Červený, Jan - Šalagovič, Jakub
Fully Automated Attractor Analysis of Cyanobacteria Models.
22nd International Conference on System Theory, Control and Computing (ICSTCC). Sinaia: IEE, 2018, s. 354-359. ISSN 2372-1618.
[International Conference on System Theory, Control and Computing (ICSTCC) /22./. Sinaia (RO), 10.12.2018-12.12.2018]
R&D Projects: GA MŠMT(CZ) LM2015055
Institutional support: RVO:86652079
Keywords : biological system modeling * mathematical model * computational modeling * numerical models * analytical models * data models
OECD category: Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)
Result website:
https://ieeexplore.ieee.org/xpl/mostRecentIssue.jsp?punumber=8514498DOI: https://doi.org/10.1109/ICSTCC.2018.8540762
Permanent Link: http://hdl.handle.net/11104/0290004 - 3.0482418 - ÚVGZ 2019 RIV US eng C - Conference Paper (international conference)
Fišer, J. - Zítek, P. - Červený, Jan
Relay feedback oscillator design for modeling circadian rhythms in cyanobacteria.
PROCEEDINGS OF THE ASME INTERNATIONAL MECHANICAL ENGINEERING CONGRESS AND EXPOSITION 2011. Vol. 2. Denver, Colorado: ASME, 2012, s. 549-556. ISBN 978-0-7918-5488-4.
[ASME International Mechanical Engineering Congress and Exposition (IMECE). Denver (US), 11.11.2011-17.11.2011]
Institutional support: RVO:86652079
Keywords : biological rhythms * mathematical-model * control-systems * clock * phosphorylation * neurospora * drosophila * protein * period * light * circadian rhythms * oscillator * limit cycle * relay characteristics * cyanobacteria growth
OECD category: Nano-materials (production and properties)
Permanent Link: http://hdl.handle.net/11104/0277826 - 4.0462319 - ÚVGZ 2017 RIV CH eng C - Conference Paper (international conference)
Troják, M. - Šafránek, D. - Hrabec, J. - Šalagovič, J. - Romanovská, F. - Červený, Jan
E-Cyanobacterium.org: A Web-Based Platform for Systems Biology of Cyanobacteria.
Computational Methods in Systems Biology. Cham: Springer, 2016 - (Bartocci, E.; Lio, P.; Paolleti, N.), s. 316-322. Lecture Notes in Bioinformatics, 9859. ISBN 978-3-319-45176-3.
[International Conference on Computational Methods in Systems Biology /14./. Cambridge (GB), 21.09.2016-23.09.2016]
R&D Projects: GA MŠMT(CZ) LM2015055
Institutional support: RVO:67179843
Keywords : bioinformatics * simulation and modeling * cyanobacteria * system biology * computational methods * engineering controlled terms * dynamical model * online platforms * biology
Subject RIV: EH - Ecology, Behaviour
DOI: https://doi.org/10.1007/978-3-319-45177-0_20
Permanent Link: http://hdl.handle.net/11104/0264279 - 5.0460374 - ÚVGZ 2017 RIV CH eng C - Conference Paper (international conference)
Vlachyňská, A. - Červený, Jan - Cmiel, V. - Tureček, T.
Automatic Image-Based Method for Quantitative Analysis of Photosynthetic Cell Cultures.
Hybrid Artificial Intelligent Systems: 11th International Conference, HAIS 2016, Seville, Spain, April 18-20, 2016, Proceedings. Cham: Springer International Publishing, 2016 - (Martínez-Álvarez, F.; Troncoso, A.; Quintián, H.; Corchado, E.), s. 402-103. Lecture Notes in Computer Science, 9648. ISBN 978-3-319-32033-5. ISSN 0302-9743.
[International Conference on Hybrid Artificial Intelligent Systems /11./. Seville (ES), 18.04.2016-20.04.2016]
R&D Projects: GA MŠMT(CZ) LO1415
Institutional support: RVO:67179843
Keywords : automated cell counting * image segmentation * plant cell * suspension cultures * 3D reconstruction * visualization
Subject RIV: EH - Ecology, Behaviour
DOI: https://doi.org/10.1007/978-3-319-32034-2_34
Permanent Link: http://hdl.handle.net/11104/0260480 - 6.0456348 - ÚVGZ 2016 RIV CZ eng C - Conference Paper (international conference)
Zavřel, Tomáš - Očenášová, Petra - Sinětova, M. A. - Červený, Jan
Comparative growth characterization of frequently used substrains of the model cyanobacterium Synechocystis sp. PCC 6803 under varying culture conditions.
Global Change: A Complex Challenge : Conference Proceedings. Brno: Global Change Research Centre, The Czech Academy of Sciences, v. v. i., 2015 - (Urban, O.; Šprtová, M.; Klem, K.), s. 154-157. ISBN 978-80-87902-10-3.
[Global Change: A Complex Challenge /4th/. Brno (CZ), 23.03.2015-24.03.2015]
R&D Projects: GA MŠMT(CZ) LO1415; GA MŠMT(CZ) ED1.1.00/02.0073; GA MŠMT(CZ) EE2.3.20.0256
Institutional support: RVO:67179843
Keywords : growth characterization * cyanobacterium Synechocystis * culture conditions
Subject RIV: EH - Ecology, Behaviour
Permanent Link: http://hdl.handle.net/11104/0256879 - 7.0456345 - ÚVGZ 2016 RIV CZ eng C - Conference Paper (international conference)
Fedorko, Jan - Búzová, Diana - Červený, Jan
Development of methods for breeding high-lipidcontent algal strain Chlamydomonas reinhardtii using fluorescence-activated cell sorting.
Global Change: A Complex Challenge : Conference Proceedings. Brno: Global Change Research Centre, The Czech Academy of Sciences, v. v. i., 2015 - (Urban, O.; Šprtová, M.; Klem, K.), s. 150-153. ISBN 978-80-87902-10-3.
[Global Change: A Complex Challenge /4th/. Brno (CZ), 23.03.2015-24.03.2015]
R&D Projects: GA MŠMT(CZ) ED1.1.00/02.0073; GA MŠMT(CZ) EE2.3.20.0256; GA MŠMT(CZ) LO1415
Institutional support: RVO:67179843
Keywords : breeding high-lipidcontent * Chlamydomonas reinhardtii
Subject RIV: EH - Ecology, Behaviour
Permanent Link: http://hdl.handle.net/11104/0256902 - 8.0365075 - ÚVGZ 2012 eng C - Conference Paper (international conference)
Červený, Jan
Cyanobacterial energy storage is tightly controlled by circadian clock.
[Congress of the International Society for Applied Phycology /4./. Halifax (CA), 19.06.-24.06.2011]
Institutional research plan: CEZ:AV0Z60870520
Keywords : circadian oscillator * Cyanothece * model * glycogen * biotechnology
Subject RIV: EH - Ecology, Behaviour
Result website:
http://arl-repository.lib.cas.cz/nusl/UEK-B/cav_un_epca-0365075_01.pdf
Permanent Link: http://hdl.handle.net/11104/0200411