Search results
- 1.0574419 - ÚMG 2024 RIV eng J - Journal Article
Kubovčiak, Jan - Kolář, Michal - Novotný, Jiří
Scdrake: a reproducible and scalable pipeline for scRNA-seq data analysis.
Bioinformatics Advances. Roč. 3, č. 1 (2023), č. článku vbad089. E-ISSN 2635-0041
R&D Projects: GA MŠk(CZ) LM2018131; GA MŠk(CZ) EF16_019/0000785; GA MŠk(CZ) LX22NPO5102
Institutional support: RVO:68378050
Keywords : scRNA-seq data analysis * scdrake * R language
OECD category: Biochemistry and molecular biology
Method of publishing: Open access
https://academic.oup.com/bioinformaticsadvances/article/3/1/vbad089/7220500?login=true
Permanent Link: https://hdl.handle.net/11104/0344748
- 2.0574413 - ÚMG 2024 RIV DE eng J - Journal Article
Brabec, Tomáš - Vobořil, Matouš - Schierová, Dagmar - Valter, Evgeny - Šplíchalová, Iva - Dobeš, J. - Březina, Jiří - Dobešová, Martina - Aidarova, Aigerim - Jakubec, Martin - Manning, Jasper - Blumberg, R.S. - Waisman, A. - Kolář, Michal - Kubovčiak, Jan - Šrůtková, Dagmar - Hudcovic, Tomáš - Schwarzer, Martin - Froňková, E. - Pinkasová, T. - Jabandžiev, P. - Filipp, Dominik
IL-17-driven induction of Paneth cell antimicrobial functions protects the host from microbiota dysbiosis and inflammation in the ileum.
Mucosal Immunology. Roč. 16, č. 4 (2023), s. 373-385. ISSN 1933-0219. E-ISSN 1935-3456
R&D Projects: GA ČR(CZ) GA17-25365S; GA ČR(CZ) GA19-08294S
Grant - others:European Molecular Biology Organisation Heidelberg 4139 EMBO
Institutional support: RVO:68378050 ; RVO:67985904 ; RVO:61388971
Keywords : Interleukin (IL)-17 * Paneth cells (PCs) * IL-17 receptor (IL-17R) * antimicrobial functions * ileum
OECD category: Immunology; Microbiology (UZFG-Y); Immunology (MBU-M)
Impact factor: 8.000, year: 2022
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S1933021923000053?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0344744
- 3.0571301 - ÚMG 2024 RIV US eng J - Journal Article
Krausová, Michaela - Kreplová, Michaela - Banik, Poulami - Cvačková, Zuzana - Kubovčiak, Jan - Modrák, Martin - Zudová, Dagmar - Lindovský, Jiří - Kubik-Zahorodna, Agnieszka - Pálková, Marcela - Kolář, Michal - Procházka, Jan - Sedláček, Radislav - Staněk, David
Retinitis pigmentosa-associated mutations in mouse Prpf8 cause misexpression of circRNAs and degeneration of cerebellar granule cells.
Life Science Alliance. Roč. 6, č. 6 (2023), č. článku e202201855. E-ISSN 2575-1077
R&D Projects: GA ČR GA20-04099S; GA MŠk(CZ) LM2018126; GA MŠk EF16_013/0001789; GA MŠk EF18_046/0015861; GA MŠk(CZ) LM2018131; GA MŠk(CZ) LM2015062; GA MŠk(CZ) EF16_013/0001775
Institutional support: RVO:68378050 ; RVO:61388971
Keywords : Prpf8 * Retinitis pigmentosa * circRNA * cerebellar granule cells
OECD category: Biochemistry and molecular biology; Cell biology (MBU-M)
Impact factor: 4.400, year: 2022
Method of publishing: Open access
https://www.life-science-alliance.org/content/6/6/e202201855
Permanent Link: https://hdl.handle.net/11104/0342557
- 4.0570268 - ÚMG 2024 RIV CH eng J - Journal Article
Mandys, V. - Popov, A. - Gürlich, R. - Havránek, Jan - Pfeiferová, Lucie - Kolář, Michal - Vránová, J. - Smetana Jr, K. - Lacina, L. - Szabo, P.
Expression of Selected miRNAs in Normal and Cancer-Associated Fibroblasts and in BxPc3 and MIA PaCa-2 Cell Lines of Pancreatic Ductal Adenocarcinoma.
International Journal of Molecular Sciences. Roč. 24, č. 4 (2023), č. článku 3617. E-ISSN 1422-0067
R&D Projects: GA MŠk(CZ) LX22NPO5102; GA MŠk(CZ) EF16_019/0000785
Keywords : pancreas * cancer-associated fibroblast * miRNA * miR-21 * miR-210 * il-6 * hypoxia
OECD category: Biochemistry and molecular biology
Impact factor: 5.600, year: 2022
Method of publishing: Open access
https://www.mdpi.com/1422-0067/24/4/3617
Permanent Link: https://hdl.handle.net/11104/0341706
- 5.0569350 - ÚMG 2024 RIV CH eng J - Journal Article
Tesařová, M. - Peterková, L. - Šťastná, Monika - Kolář, Michal - Lacina, L. - Smetana Jr., K. - Hynek, R. - Betka, J. - Vlasák, A. - Lukeš, P. - Fík, Z.
Tumor Biology and Microenvironment of Vestibular Schwannoma-Relation to Tumor Growth and Hearing Loss.
Biomedicines. Roč. 11, č. 1 (2023), č. článku 32. E-ISSN 2227-9059
R&D Projects: GA MŠk(CZ) LX22NPO5102; GA MŠk(CZ) EF16_019/0000785
Keywords : VS * tumor microenvironment * tumor growth * hearing loss
OECD category: Biochemistry and molecular biology
Impact factor: 4.700, year: 2022
Method of publishing: Open access
https://www.mdpi.com/2227-9059/11/1/32
Permanent Link: https://hdl.handle.net/11104/0341882
- 6.0566161 - ÚMG 2023 RIV CH eng J - Journal Article
Petrusová, Jana - Manning, Jasper - Kubovčiak, Jan - Kolář, Michal - Filipp, Dominik
Two complementary approaches for efficient isolation of Sertoli cells for transcriptomic analysis.
Frontiers in Cell and Developmental Biology. Roč. 10, September (2022), č. článku 972017. ISSN 2296-634X. E-ISSN 2296-634X
R&D Projects: GA ČR GA20-30350S; GA MŠk(CZ) LM2018131
Institutional support: RVO:68378050
Keywords : Sertoli cell * flow cytometry * FSHr * Occludin * spermatogenesis
OECD category: Cell biology
Impact factor: 5.500, year: 2022
Method of publishing: Open access
https://www.frontiersin.org/articles/10.3389/fcell.2022.972017/full
Permanent Link: https://hdl.handle.net/11104/0337587
- 7.0566109 - ÚMG 2023 RIV GB eng J - Journal Article
Cihlářová, Zuzana - Kubovčiak, Jan - Sobol, Margaryta - Krejčíková, Kateřina - Šáchová, Jana - Kolář, Michal - Staněk, David - Bařinka, Cyril - Yoon, G. - Caldecott, Keith - Hanzlíková, Hana
BRAT1 links Integrator and defective RNA processing with neurodegeneration.
Nature Communications. Roč. 13, č. 1 (2022), č. článku 5026. E-ISSN 2041-1723
R&D Projects: GA ČR GA22-00885S; GA ČR GA21-04132S; GA MŠk(CZ) EF16_019/0000785; GA MŠk(CZ) LM2018129; GA MŠk(CZ) EF18_046/0016045; GA MŠk(CZ) ED1.1.00/02.0109
Research Infrastructure: Czech-BioImaging II - 90129
Institutional support: RVO:68378050 ; RVO:86652036
Keywords : Multifocal seizure syndromelethal * Lethal neonatal regidity * Histone messenger-RNAS * Transcription * Complex * Association * Disruption * Mutation
OECD category: Cell biology; Cell biology (BTO-N)
Impact factor: 16.600, year: 2022
Method of publishing: Open access
https://www.nature.com/articles/s41467-022-32763-6
Permanent Link: https://hdl.handle.net/11104/0337543
- 8.0565487 - MBÚ 2023 RIV US eng J - Journal Article
Rasl, Jan - Grušanović, Josipa - Klímová, Zuzana - Čáslavský, Josef - Groušl, Tomáš - Novotný, Jiří - Kolář, Michal - Vomastek, Tomáš
ERK2 signaling regulates cell-cell adhesion of epithelial cells and enhances growth factor-induced cell scattering.
Cellular Signalling. Roč. 99, November 2022 (2022), č. článku 110431. ISSN 0898-6568. E-ISSN 1873-3913
R&D Projects: GA MŠk(CZ) LM2018129; GA MŠk(CZ) EF18_046/0016045; GA ČR GA18-11908S; GA ČR(CZ) GA19-08013S; GA MŠk(CZ) EF16_019/0000785
Institutional support: RVO:61388971 ; RVO:68378050
Keywords : Cell scattering * Cell-cell adhesions * Epithelial plasticity * erk * Fra1 * hgf/sf
OECD category: Cell biology
Impact factor: 4.800, year: 2022
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/pii/S0898656822001930?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0337023
- 9.0565126 - ÚMG 2023 RIV CZ eng J - Journal Article
Rašková, M. - Lacina, L. - Kejík, Z. - Venhauerová, P. - Skaličková, S. - Kolář, Michal - Jakůbek, M. - Rosel, D. - Smetana Jr., K. - Brabek, J.
The Role of IL-6 in Cancer Cell Invasiveness and Metastasis-Overview and Therapeutic Opportunities.
Cells. Roč. 11, č. 22 (2022), č. článku 3698. E-ISSN 2073-4409
R&D Projects: GA MŠk(CZ) LX22NPO5102; GA MŠk(CZ) EF16_019/0000785; GA MŠk(CZ) LM2018131
Research Infrastructure: EATRIS-CZ III - 90133
Institutional support: RVO:68378050
Keywords : il-6 * cancer * metastasis
OECD category: Cell biology
Impact factor: 6.000, year: 2022
Method of publishing: Open access
https://www.mdpi.com/2073-4409/11/22/3698
Permanent Link: https://hdl.handle.net/11104/0338503
- 10.0561378 - ÚMG 2023 RIV CH eng J - Journal Article
Švec, Jiří - Šťastná, Monika - Janečková, Lucie - Hrčkulák, Dušan - Vojtěchová, Martina - Onhajzer, Jakub - Kříž, Vítězslav - Galušková, Kateřina - Šloncová, Eva - Kubovčiak, Jan - Pfeiferová, Lucie - Hrudka, J. - Matěj, R. - Waldauf, P. - Havluj, L. - Kolář, Michal - Kořínek, Vladimír
TROP2 Represents a Negative Prognostic Factor in Colorectal Adenocarcinoma and Its Expression Is Associated with Features of Epithelial-Mesenchymal Transition and Invasiveness.
Cancers (Basel). Roč. 14, č. 17 (2022), č. článku 4137. E-ISSN 2072-6694
R&D Projects: GA ČR(CZ) GA18-26324S; GA MŠk(CZ) LX22NPO5102; GA MŠk(CZ) LM2018129; GA MŠk(CZ) EF16_019/0000785
Institutional support: RVO:68378050
Keywords : apc * colorectal cancer * emt * expression profiling * organoids * tacstd2 * WNT/beta-catenin signaling
OECD category: Oncology
Impact factor: 5.200, year: 2022
Method of publishing: Open access
https://doi.org/10.3390/cancers14174137
Permanent Link: https://hdl.handle.net/11104/0338612