Search results
- 1.0559941 - ÚMG 2023 RIV GB eng J - Journal Article
Gray, M.W. - Burger, G. - Derelle, R. - Klimeš, V. - Leger, M.M. - Sarrasin, M. - Vlček, Čestmír - Roger, A. J. - Eliáš, M. - Lang, B.F.
The draft nuclear genome sequence and predicted mitochondrial proteome of Andalucia godoyi, a protist with the most gene-rich and bacteria-like mitochondrial genome.
BMC BIOLOGY. Roč. 18, č. 1 (2020), č. článku 22. E-ISSN 1741-7007
Institutional support: RVO:68378050
Keywords : Mitochondrion * Mitochondrial genome * Mitochondrial proteome * Mitochondrial evolution * Protist * Jakobids * Andalucia godoyi
OECD category: Cell biology
Impact factor: 7.431, year: 2020
Method of publishing: Open access
https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-020-0741-6
Permanent Link: https://hdl.handle.net/11104/0333061 - 2.0555493 - ÚMG 2022 RIV GB eng J - Journal Article
Soukal, P. - Hrdá, Š. - Karnkowska, A. - Milanowski, R. - Szabová, J. - Hradilová, Miluše - Strnad, Hynek - Vlček, Čestmír - Čepička, I. - Hampl, V.
Heterotrophic euglenid Rhabdomonas costata resembles its phototrophic relatives in many aspects of molecular and cell biology.
Scientific Reports. Roč. 11, č. 1 (2021), č. článku 13070. ISSN 2045-2322. E-ISSN 2045-2322
R&D Projects: GA MŠMT(CZ) LQ1604
Institutional support: RVO:68378050
Keywords : phylogenetic analysis * energy-metabolism * sequence * introns * genome * rna * alignment * proteins * gracilis * identification
OECD category: Biology (theoretical, mathematical, thermal, cryobiology, biological rhythm), Evolutionary biology
Impact factor: 4.997, year: 2021
Method of publishing: Open access
https://www.nature.com/articles/s41598-021-92174-3
Permanent Link: http://hdl.handle.net/11104/0330000 - 3.0555440 - ÚMG 2022 RIV US eng J - Journal Article
Žárský, V. - Klimeš, V. - Pačes, Jan - Vlček, Čestmír - Hradilová, Miluše - Benes, V. - Nývltová, E. - Hrdý, I. - Pyrih, J. - Mach, J. - Barlow, L. - Stairs, C.W. - Eme, L. - Hall, N. - Eliáš, M. - Dacks, Joel Bryan - Roger, A. - Tachezy, J.
The Mastigamoeba balamuthi Genome and the Nature of the Free-Living Ancestor of Entamoeba.
Molecular Biology and Evolution. Roč. 38, č. 6 (2021), s. 2240-2259. ISSN 0737-4038. E-ISSN 1537-1719
R&D Projects: GA MŠMT(CZ) EF16_019/0000759; GA MŠMT(CZ) LM2018131
Research Infrastructure: ELIXIR-CZ II - 90131
Institutional support: RVO:68378050 ; RVO:60077344
Keywords : evolution of parasitism * lateral gene transfer * pathway complexity * Archamoebae * chitinous cysts * Mastigamoeba
OECD category: Biochemistry and molecular biology; Microbiology (BC-A)
Impact factor: 8.800, year: 2021
Method of publishing: Open access
https://academic.oup.com/mbe/article/38/6/2240/6126414?login=false
Permanent Link: http://hdl.handle.net/11104/0329973 - 4.0555026 - BC 2022 RIV GB eng J - Journal Article
Stairs, C.W. - Táborský, P. - Salomaki, Eric David - Kolísko, Martin - Pánek, T. - Eme, L. - Hradilová, Miluše - Vlček, Čestmír - Jerlstrom-Hultqvist, J. - Roger, A. - Čepička, I.
Anaeramoebae are a divergent lineage of eukaryotes that shed light on the transition from anaerobic mitochondria to hydrogenosomes.
Current Biology. Roč. 31, č. 24 (2021), s. 5605-+. ISSN 0960-9822. E-ISSN 1879-0445
R&D Projects: GA MŠMT(CZ) EF20_079/0017809; GA ČR(CZ) GA18-28103S; GA MŠMT(CZ) EF16_019/0000759
Institutional support: RVO:60077344 ; RVO:68378050
Keywords : subcellular-localization * proteins * reconstruction * annotation * generation * prediction * evolution * import * mafft * tool
OECD category: Cell biology; Cell biology (UMG-J)
Impact factor: 10.900, year: 2021
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S0960982221013646?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0329644 - 5.0553925 - BC 2022 RIV GB eng J - Journal Article
Horváthová, L. - Žárský, V. - Pánek, T. - Derelle, R. - Pyrih, Jan - Motyčková, A. - Klapsťová, V. - Vinopalova, M. - Marková, L. - Voleman, L. - Klimeš, V. - Petrů, M. - Vaitová, Z. - Čepička, I. - Hryzakova, K. - Harant, K. - Gray, M.W. - Chami, M. - Guilvout, I. - Francetic, O. - Lang, B. - Vlček, Čestmír - Tsaousis, A. - Eliaš, M. - Doležal, P.
Analysis of diverse eukaryotes suggests the existence of an ancestral mitochondrial apparatus derived from the bacterial type II secretion system.
Nature Communications. Roč. 12, č. 1 (2021), č. článku 2947. E-ISSN 2041-1723
R&D Projects: GA MŠMT(CZ) EF16_019/0000759
Institutional support: RVO:60077344 ; RVO:68378050
Keywords : multiple sequence alignment * protein secretion * swiss-model * molecular architecture * structural insights * crystal-structure * atpase gspe * membrane * prediction * complex
OECD category: Microbiology; Microbiology (UMG-J)
Impact factor: 17.694, year: 2021
Method of publishing: Open access
https://www.nature.com/articles/s41467-021-23046-7
Permanent Link: http://hdl.handle.net/11104/0328602 - 6.0502204 - ÚMG 2019 RIV GR eng J - Journal Article
Kodet, O. - Dvořánková, B. - Bendlová, B. - Sykorova, V. - Krajsova, I. - Štork, J. - Kučera, J. - Szabo, P. - Strnad, Hynek - Kolář, Michal - Vlček, Čestmír - Smetana, K. - Lacina, L.
Microenvironment-driven resistance to B-Raf inhibition in a melanoma patient is accompanied by broad changes of gene methylation and expression in distal fibroblasts.
International Journal of Molecular Medicine. Roč. 41, č. 5 (2018), s. 2687-2703. ISSN 1107-3756. E-ISSN 1791-244X
R&D Projects: GA MZd(CZ) NV16-29032A; GA MŠMT(CZ) LQ1604; GA MŠMT(CZ) ED1.1.00/02.0109
Grant - others:GA MŠk(CZ) LM2015042
Institutional support: RVO:68378050
Keywords : melanoma * cancer-associated fibroblast * genome * transcriptome * gene methylation * stroma * smooth muscle actin * alpha-actin-2 * B-Raf inhibitor * transforming growth factor-1 * stroma-driven resistance
OECD category: Biochemistry and molecular biology
Impact factor: 2.928, year: 2018
Permanent Link: http://hdl.handle.net/11104/0294149 - 7.0486921 - ÚMG 2018 RIV GB eng J - Journal Article
Ricken, B. - Kolvenbach, B.A. - Bergesch, C. - Benndorf, D. - Kroll, K. - Strnad, Hynek - Vlček, Čestmír - Adaixo, R. - Hammes, F. - Shahgaldian, P. - Schaeffer, A. - Kohler, H.P.E. - Corvini, P.F.X.
FMNH2-dependent monooxygenases initiate catabolism of sulfonamides in Microbacterium sp strain BR1 subsisting on sulfonamide antibiotics.
Scientific Reports. Roč. 7, podzim (2017), č. článku 15783. ISSN 2045-2322. E-ISSN 2045-2322
Institutional support: RVO:68378050
Keywords : resistance mechanism * clinical specimens * sulfamethoxazole * bacteria * degradation * benzylpenicillin * biodegradation * genes * sulfadiazine * arthrobacter
OECD category: Microbiology
Impact factor: 4.122, year: 2017
Permanent Link: http://hdl.handle.net/11104/0281627 - 8.0486726 - ÚMG 2018 RIV US eng J - Journal Article
Panek, T. - Zadrobilkova, E. - Walker, G. - Brown, M. W. - Gentekaki, E. - Hroudová, Miluše - Kang, S. - Roger, A. J. - Tice, A. K. - Vlček, Čestmír - Čepička, I.
First multigene analysis of Archamoebae (Amoebozoa: Conosa) robustly reveals its phylogeny and shows that Entamoebidae represents a deep lineage of the group.
Molecular Phylogenetics and Evolution. Roč. 98, jaro (2016), s. 41-51. ISSN 1055-7903. E-ISSN 1095-9513
Institutional support: RVO:68378050
Keywords : Conosa * Pelobiontida * Evolution of parasitism * Nitrogen fixation system * Flagellar apparatus * Classification
OECD category: Microbiology
Impact factor: 4.419, year: 2016
Permanent Link: http://hdl.handle.net/11104/0281463 - 9.0486310 - ÚMG 2018 RIV GB eng J - Journal Article
Karnkowska, A. - Vacek, V. - Zubáčová, Z. - Treitli, S.C. - Petrzelkova, R. - Eme, L. - Novák, L. - Žárský, V. - Barlow, L.D. - Herman, E.K. - Soukal, P. - Hroudová, Miluše - Doležal, P. - Stairs, C.W. - Roger, A. J. - Eliaš, M. - Dacks, J.B. - Vlček, Čestmír - Hampl, V.
A Eukaryote without a Mitochondrial Organelle.
Current Biology. Roč. 26, č. 10 (2016), s. 1274-1284. ISSN 0960-9822. E-ISSN 1879-0445
R&D Projects: GA MŠMT(CZ) LQ1604; GA MŠMT(CZ) ED1.1.00/02.0109; GA ČR GAP506/12/1010
Institutional support: RVO:68378050
Keywords : arginine dihydrolase pathway * tail-anchored proteins * fe-s cluster * trichomonas-vaginalis * entamoeba-histolytica * giardia-intestinalis * tritrichomonas-fetus * genome annotation * energy-metabolism * gene-transfer
OECD category: Developmental biology
Impact factor: 8.851, year: 2016
Permanent Link: http://hdl.handle.net/11104/0281161 - 10.0486306 - ÚMG 2018 RIV US eng J - Journal Article
Hrdá, Š. - Hroudová, Miluše - Vlček, Čestmír - Hampl, V.
Mitochondrial Genome of Prasinophyte Alga Pyramimonas parkeae.
Journal of Eukaryotic Microbiology. Roč. 64, č. 3 (2017), s. 360-369. ISSN 1066-5234. E-ISSN 1550-7408
R&D Projects: GA ČR(CZ) GAP506/11/1320; GA MŠMT(CZ) LQ1604; GA MŠMT(CZ) ED1.1.00/02.0109
Institutional support: RVO:68378050
Keywords : cox 1 * intron * inverted repeats * phylogeny * trans-splicing
OECD category: Microbiology
Impact factor: 2.537, year: 2017
Permanent Link: http://hdl.handle.net/11104/0281160