Search results
- 1.0345103 - BFÚ 2011 RIV US eng J - Journal Article
Mitchell, E.P. - Sabin, Ch. - Šnajdrová, L. - Pokorná, M. - Perret, S. - Gautier, C. - Hofr, Ctirad - Gilboa-Garber, N. - Koča, J. - Wimmerová, M. - Imberty, A.
High affinity fucose binding of Pseudomonas aeruginosa lectin PA-IIL: 1.0 Å resolution crystal structure of the complex combined with thermodynamics and computational chemistry approaches.
Proteins-Structure, Function and Bioinformatics. Roč. 58, č. 3 (2005), s. 735-746. ISSN 0887-3585. E-ISSN 1097-0134
R&D Projects: GA ČR(CZ) GP202/01/D110
Grant - others:GA MŠk(CZ) LN00A016
Program: LN
Institutional research plan: CEZ:AV0Z50040507
Keywords : Pseudomonas aeruginosa * lectin * fucose
Subject RIV: BO - Biophysics
Impact factor: 4.684, year: 2005
Permanent Link: http://hdl.handle.net/11104/0186447 - 2.0194674 - UOCHB-X 20020359 RIV GB eng J - Journal Article
Veselá, D. - Marek, R. - Ubik, Karel - Lunerová, K. - Sklenář, V. - Suchý, V.
Dracophane, a metacyclophane derivative from the resin of .I.Dracaena cinnabari./I. Balf.
Phytochemistry. Roč. 61, č. 8 (2002), s. 967-970. ISSN 0031-9422. E-ISSN 1873-3700
R&D Projects: GA MŠMT LN00A016
Institutional research plan: CEZ:AV0Z4055905
Keywords : metacyclophane
Subject RIV: CC - Organic Chemistry
Impact factor: 1.686, year: 2002
Permanent Link: http://hdl.handle.net/11104/0090346 - 3.0188881 - UMCH-V 20023146 RIV US eng J - Journal Article
Marek, R. - Brus, Jiří - Toušek, J. - Kovács, L. - Hocková, Dana
N7- and N9-substituted purine derivatives: a N-15 NMR study.
Magnetic Resonance in Chemistry. Roč. 40, č. 5 (2002), s. 353-360. ISSN 0749-1581. E-ISSN 1097-458X
R&D Projects: GA ČR GA203/98/P026; GA MŠMT LN00A016
Institutional research plan: CEZ:AV0Z4050913
Keywords : NMR * H-1 NMR * N-15 NMR
Subject RIV: CE - Biochemistry
Impact factor: 0.994, year: 2002
Permanent Link: http://hdl.handle.net/11104/0084760 - 4.0181433 - UFCH-W 20020099 RIV US eng J - Journal Article
Wärmländer, S. - Šponer, Jiří - Leijon, M. - Šponer, Judit E.
The Influence of the Thymine C5 Methyl Group on Spontaneous Base Pair Breathing in DNA.
Journal of Biological Chemistry. Roč. 277, č. 32 (2002), s. 28491-28497. ISSN 0021-9258. E-ISSN 1083-351X
R&D Projects: GA MŠMT LN00A016
Institutional research plan: CEZ:AV0Z4040901
Keywords : thymine * DNA * base pairs
Subject RIV: CF - Physical ; Theoretical Chemistry
Impact factor: 6.696, year: 2002
Permanent Link: http://hdl.handle.net/11104/0078004 - 5.0181432 - UFCH-W 20020098 RIV US eng J - Journal Article
Schmidt, K. S. - Reedijk, J. - Weisz, K. - Janke, E. M. B. - Šponer, Judit E. - Šponer, Jiří - Lippert, B.
Loss of Hoogsteen Pairing Ability upon N1 Adenine Platinum Binding.
Inorganic Chemistry. Roč. 41, č. 11 (2002), s. 2855-2863. ISSN 0020-1669. E-ISSN 1520-510X
R&D Projects: GA MŠMT LN00A016; GA AV ČR IAA4040903
Institutional research plan: CEZ:AV0Z4040901
Keywords : adenine * thymine * Hoogsteen pairing ability
Subject RIV: CF - Physical ; Theoretical Chemistry
Impact factor: 2.950, year: 2002
Permanent Link: http://hdl.handle.net/11104/0001886 - 6.0180936 - UFCH-W 20000130 RIV GB eng J - Journal Article
Šponer, Jiří - Florián, J. - Ng, H.L. - Šponer, Judit E. - Špačková, Naďa
Local Conformational Variations Observed in B-DNA Crystals do not Improve Base Stacking: Computational Analysis of Base Stacking in a d(CATGGGCCCATG)2 B-A Intermediate Crystal Structure.
Nucleic Acids Research. Roč. 28, č. 24 (2000), s. 4893-4902. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA AV ČR IAA4040903; GA MŠMT LN00A016
Institutional research plan: CEZ:AV0Z4040901; CEZ:A54/98:Z4-040-9-ii
Subject RIV: CF - Physical ; Theoretical Chemistry
Impact factor: 5.396, year: 2000
Permanent Link: http://hdl.handle.net/11104/0077552 - 7.0127050 - BFU-R 20033138 RIV US eng J - Journal Article
Burda, J. V. - Šponer, Jiří - Hrabáková, J. - Zeizinger, M. - Leszczynski, J.
The influence of N-7 guanine modifications on the strength of Watson-Crick base pairing and guanine N-1 acidity: Comparison of gas-phase and condensed-phase trends.
Journal of Physical Chemistry B. Roč. 107, č. 22 (2003), s. 5349-5356. ISSN 1520-6106. E-ISSN 1520-5207
R&D Projects: GA MŠMT ME 517; GA MŠMT LN00A016
Grant - others:Wellcome Trust(GB) GR067507MF; ONR(US) N00034-03-1-0116; National Science Foundation(US) CREST 9805465
Institutional research plan: CEZ:AV0Z5004920
Keywords : Watson-Crick base pairing * guanines * gas-phase and condensed-phase trends
Subject RIV: BO - Biophysics
Impact factor: 3.679, year: 2003
Permanent Link: http://hdl.handle.net/11104/0000367 - 8.0127011 - BFU-R 20033094 RIV US eng J - Journal Article
Šponer, Jiří - Mokdad, A. - Šponer, Judit E. - Špačková, Naďa - Leszczynski, J. - Leontis, N. B.
Unique tertiary and neighbor interactions determine conservation patterns of cis Watson-Crick A/G base pairs.
Journal of Molecular Biology. Roč. 330, č. 5 (2003), s. 967-978. ISSN 0022-2836. E-ISSN 1089-8638
R&D Projects: GA MŠMT LN00A016
Grant - others:Wellcome Trust(GB) GR067507MF; National Institutes of Health(US) 2R15 GM55898; National Science Foundation(US) CHE-9732563; National Science Foundation(US) CREST 9805465; National Institutes of Health(US) RCMI G1 2RR13459-21
Institutional research plan: CEZ:AV0Z5004920
Keywords : cis Watson-Crick A/G base-pairs * X-ray structures * tertiary interactions
Subject RIV: BO - Biophysics
Impact factor: 5.239, year: 2003
Permanent Link: http://hdl.handle.net/11104/0025236 - 9.0127009 - BFU-R 20033092 RIV GB eng J - Journal Article
Réblová, K. - Špačková, Naďa - Šponer, Judit E. - Koča, J. - Šponer, Jiří
Molecular dynamics simulations of RNA kissing-loop motifs reveal structural dynamics and formation of cation-binding pockets.
Nucleic Acids Research. Roč. 31, č. 23 (2003), s. 6942-6952. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA MŠMT LN00A016
Grant - others:Wellcome Trust(GB) GR067507MF
Institutional research plan: CEZ:AV0Z5004920
Keywords : molecular dynamics * kissing-loop complex * cation-binding pocket
Subject RIV: BO - Biophysics
Impact factor: 6.575, year: 2003
Permanent Link: http://hdl.handle.net/11104/0025234 - 10.0126998 - BFU-R 20033081 RIV US eng J - Journal Article
Réblová, K. - Špačková, Naďa - Štefl, R. - Csaszar, K. - Koča, J. - Leontis, N. B. - Šponer, Jiří
Non-Watson-Crick basepairing and hydration in RNA motifs: molecular dynamics of 5S rRNA loop E.
Biophysical Journal. Roč. 84, č. 6 (2003), s. 3564-3582. ISSN 0006-3495. E-ISSN 1542-0086
R&D Projects: GA MŠMT LN00A016
Grant - others:National Institutes of Health(US) 2R15 GM55898; National Science Foundation(US) CHE-9732563
Institutional research plan: CEZ:AV0Z5004920
Keywords : non-Watson-Crick base pairs * ribosomal RNA * Loop E
Subject RIV: BO - Biophysics
Impact factor: 4.463, year: 2003
Permanent Link: http://hdl.handle.net/11104/0025223