Search results
- 1.0580269 - MBÚ 2024 RIV GB eng J - Journal Article
Jeřábková, M. - Šmrhová, T. - Lopez-Echartea, E. - Dresler, J. - Šuman, J. - Kapinusová, G. - Cajthaml, Tomáš - Škrob, Zdena - Kyclt, R. - Fagerman, J. - Strejček, M. - Uhlík, O.
Silvimonas soli sp. nov., a new member of Chromobacteriaceae isolated from soil in Norrbyskär island, Sweden
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International Journal of Systematic and Evolutionary Microbiology. Roč. 73, č. 9 (2023), č. článku 006048. ISSN 1466-5026. E-ISSN 1466-5034
R&D Projects: GA MŠMT(CZ) LM2023055
Institutional support: RVO:61388971
Keywords : 16S rRNA gene analysis * Chromobacteriaceae * Norrbyskär * novel species * Silvimonas * soil bacteria and whole genome sequencing
OECD category: Microbiology
Impact factor: 2.8, year: 2022
Method of publishing: Limited access
https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.006048
Permanent Link: https://hdl.handle.net/11104/0349020 - 2.0579697 - ÚMCH 2025 RIV NL eng J - Journal Article
Skleničková, Kateřina - Suchopárová, E. - Abbrent, Sabina - Pokorný, Václav - Kočková, Olga - Nevoralová, Martina - Cajthaml, Tomáš - Strejček, M. - Uhlík, O. - Halecký, M. - Beneš, Hynek
Biodegradation of aliphatic polyurethane foams in soil: influence of amide linkages and supramolecular structure.
Science of the Total Environment. Roč. 912, 20 February (2024), č. článku 169062. ISSN 0048-9697. E-ISSN 1879-1026
R&D Projects: GA ČR(CZ) GA19-08549S
Institutional support: RVO:61389013 ; RVO:61388971
Keywords : polyurethane foam * amide bond * biodegradation
OECD category: Polymer science; Environmental sciences (social aspects to be 5.7) (MBU-M)
Impact factor: 9.8, year: 2022
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/pii/S0048969723076921?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0348524 - 3.0574682 - MBÚ 2024 RIV GB eng J - Journal Article
Lopez Marin, M. A. - Šuman, J. - Jani, K. - Ulbrich, P. - Cajthaml, Tomáš - Filipová, Alena - Pajer, P. - Neumann-Schaal, M. - Strejček, M. - Uhlík, O.
Solicola gregarius gen. nov., sp. nov., a soil actinobacterium isolated after enhanced cultivation with Micrococcus luteus culture supernatant.
International Journal of Systematic and Evolutionary Microbiology. Roč. 73, č. 1 (2023), č. článku 005678. ISSN 1466-5026. E-ISSN 1466-5034
R&D Projects: GA MŠMT(CZ) LM2018131
Institutional support: RVO:61388971
Keywords : compost soil * extracellular organic matter * Nocardioidaceae * resuscitation-promoting factor * soil bacteria * whole-genome average nucleotide identity
OECD category: Microbiology
Impact factor: 2.8, year: 2022
Method of publishing: Limited access
https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.005678
Permanent Link: https://hdl.handle.net/11104/0347501 - 4.0566474 - MBÚ 2023 RIV GB eng J - Journal Article
Vodickova, P. - Šuman, J. - Benešová, E. - Strejček, M. - Neumann-Schaal, M. - Cajthaml, Tomáš - Rídl, Jakub - Pajer, P. - Ulbrich, P. - Uhlík, O. - Lipovová, P.
Arthrobacter polaris sp. nov., a new cold-adapted member of the family Micrococcaceae isolated from Antarctic fellfield soil.
International Journal of Systematic and Evolutionary Microbiology. Roč. 72, č. 10 (2022), č. článku 005541. ISSN 1466-5026. E-ISSN 1466-5034
R&D Projects: GA MŠMT(CZ) LM2018131
Institutional support: RVO:61388971 ; RVO:68378050
Keywords : Antarctica * Arthrobacter * cold-adapted microorganisms * Micrococcaceae * whole-genome sequencing
OECD category: Microbiology; Microbiology (UMG-J)
Impact factor: 2.8, year: 2022
Method of publishing: Limited access
https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.005541
Permanent Link: https://hdl.handle.net/11104/0337797 - 5.0565771 - MBÚ 2023 RIV GB eng J - Journal Article
Lopez Marin, M.A. - Šuman, J. - Jani, K. - Ulbrich, P. - Cajthaml, Tomáš - Pajer, P. - Wolf, J. - Neumann-Schaal, M. - Strejček, M. - Uhlík, O.
Pedomonas mirosovicensis gen. nov., sp. nov., a bacterium isolated from soil with the aid of Micrococcus luteus culture supernatant containing resuscitation-promoting factor.
International Journal of Systematic and Evolutionary Microbiology. Roč. 72, č. 8 (2022), č. článku 005467. ISSN 1466-5026. E-ISSN 1466-5034
R&D Projects: GA MŠMT(CZ) LM2018131
Institutional support: RVO:61388971
Keywords : compost soil * extracellular organic matter * resuscitation-promoting factor * soil bacteria * Sphingosinicellaceae * whole genome average nucleotide identity
OECD category: Microbiology
Impact factor: 2.8, year: 2022
Method of publishing: Limited access
https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.005467
Permanent Link: https://hdl.handle.net/11104/0337707 - 6.0564845 - MBÚ 2023 RIV DE eng J - Journal Article
Vergani, L. - Mapelli, F. - Folkmanová, M. - Papík, J. - Jansa, Jan - Uhlík, O. - Borin, S.
DNA stable isotope probing on soil treated by plant biostimulation and flooding revealed the bacterial communities involved in PCB degradation.
Scientific Reports. Roč. 12, č. 1 (2022), č. článku 19232. ISSN 2045-2322. E-ISSN 2045-2322
EU Projects: European Commission(CZ) 841317
Institutional support: RVO:61388971
Keywords : Polychlorinated biphenyl (PCB) * microbial PCB degraders * stable isotope probing SIP incubation * illumina MiSeq * sequencing * soil bacterial communities * Betaproteobacteria * Actinobacteria
OECD category: Microbiology
Impact factor: 4.6, year: 2022
Method of publishing: Open access
https://www.nature.com/articles/s41598-022-23728-2
Permanent Link: https://hdl.handle.net/11104/0336409 - 7.0559438 - ÚMG 2023 RIV NL eng J - Journal Article
Desmarais, M. - Fraraccio, S. - Dolinová, I. - Rídl, Jakub - Strnad, Hynek - Kubátová, H. - Ševců, A. - Šuman, J. - Strejček, M. - Uhlík, O.
Genomic analysis of Acinetobacter pittii CEP14 reveals its extensive biodegradation capabilities, including cometabolic degradation of cis-1,2-dichloroethene.
Antonie van Leeuwenhoek International Journal of General and Molecular Microbiology. Roč. 115, č. 8 (2022), s. 1041-1057. ISSN 0003-6072. E-ISSN 1572-9699
R&D Projects: GA MŠMT(CZ) LM2018131
Institutional support: RVO:68378050
Keywords : Acinetobacter pittii * Chlorinated ethenes (CEs) * cis-1 * 2-dichloroethene (cDCE) biodegradation * Cometabolism * Whole-genome shotgun sequencing * Oxygenase * Phenol
OECD category: Microbiology
Impact factor: 2.6, year: 2022
Method of publishing: Limited access
https://link.springer.com/article/10.1007/s10482-022-01752-6
Permanent Link: https://hdl.handle.net/11104/0332862 - 8.0556386 - MBÚ 2023 RIV GB eng J - Journal Article
Kráčmarová, M. - Uhlík, O. - Strejček, M. - Száková, J. - Černý, J. - Balík, J. - Tlustoš, P. - Kohout, Petr - Demnerová, K. - Stiborová, H.
Soil microbial communities following 20 years of fertilization and crop rotation practices in the Czech Republic.
Environmental Microbiome. Roč. 17, č. 1 (2022), č. článku 13. E-ISSN 2524-6372
Institutional support: RVO:61388971
Keywords : long-term fertilization * polycyclic aromatic-hydrocarbons * antibiotic-resistance genes * sewage-sludge * fungal community * bacterial communities * diversity * wheat * impact * biodegradation * Manure * Sewage sludge * NPK fertilizers * Microbial diversity * Community structure * Chernozem * Luvisol * Cambisol
OECD category: Microbiology
Impact factor: 7.9, year: 2022
Method of publishing: Open access
https://environmentalmicrobiome.biomedcentral.com/articles/10.1186/s40793-022-00406-4
Permanent Link: https://hdl.handle.net/11104/0333258 - 9.0555017 - ÚMG 2022 RIV GB eng J - Journal Article
Lopez-Echartea, E. - Šuman, J. - Šmrhová, T. - Rídl, Jakub - Pajer, P. - Strejček, M. - Uhlík, O.
Genomic analysis of dibenzofuran-degrading Pseudomonas veronii strain Pvy reveals its biodegradative versatility.
G3-Genes, Genomes, Genetics. Roč. 11, č. 2 (2021), č. článku jkaa030. ISSN 2160-1836. E-ISSN 2160-1836
R&D Projects: GA MŠMT(CZ) LM2015047
Research Infrastructure: ELIXIR-CZ - 90047
Institutional support: RVO:68378050
Keywords : Pseudomonas veronii strain Pvy * biodegradation * dioxygenase * dibenzofuran * whole-genome sequencing * nanopore technology * denitrification * organic phosphate mineralization * heavy-metal tolerance
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 3.542, year: 2021
Method of publishing: Open access
https://academic.oup.com/g3journal/article/11/2/jkaa030/6029021?login=false
Permanent Link: http://hdl.handle.net/11104/0329634 - 10.0549337 - MBÚ 2022 RIV CH eng J - Journal Article
Šuman, J. - Strejček, M. - Zubrová, A. - Čapek, J. - Wald, J. - Michalíková, Klára - Hradilová, Miluše - Šrédlová, Kamila - Semerád, Jaroslav - Cajthaml, Tomáš - Uhlík, O.
Predominant Biphenyl Dioxygenase From Legacy Polychlorinated Biphenyl (PCB)-Contaminated Soil Is a Part of Unusual Gene Cluster and Transforms Flavone and Flavanone.
Frontiers in Microbiology. Roč. 12, OCT 14 2021 (2021), č. článku 644708. ISSN 1664-302X. E-ISSN 1664-302X
R&D Projects: GA MŠMT(CZ) LM2018131
Institutional support: RVO:61388971 ; RVO:68378050
Keywords : aromatic ring-hydroxylating dioxygenases * biphenyl dioxygenase * secondary plant metabolites * flavonoids * polychlorinated biphenyls * functional metagenomics
OECD category: Environmental biotechnology; Environmental biotechnology (UMG-J)
Impact factor: 6.064, year: 2021
Method of publishing: Open access
https://www.frontiersin.org/articles/10.3389/fmicb.2021.644708/full
Permanent Link: http://hdl.handle.net/11104/0325355