Search results
- 1.0585513 - MBÚ 2025 RIV US eng J - Journal Article
Zákopčaník, Marek - Kavan, Daniel - Novák, Petr - Loginov, Dmitry Sergej
Quantifying the Impact of the Peptide Identification Framework on the Results of Fast Photochemical Oxidation of Protein Analysis.
Journal of Proteome Research. Roč. 23, č. 2 (2023), s. 609-617. ISSN 1535-3893. E-ISSN 1535-3907
R&D Projects: GA ČR(CZ) GA22-27695S
EU Projects: European Commission(XE) 823839 - EPIC-XS
Institutional support: RVO:61388971
Keywords : mass-spectrometry * exchange * fpop * searchengine * structural proteomics
OECD category: Microbiology
Impact factor: 4.4, year: 2022
Method of publishing: Open access
https://pubs.acs.org/doi/10.1021/acs.jproteome.3c00390
Permanent Link: https://hdl.handle.net/11104/0353197 - 2.0583029 - MBÚ 2024 RIV US eng J - Journal Article
Zákopčaník, Marek - Kavan, Daniel - Novák, Petr - Loginov, Dmitry Sergej
Quantifying the Impact of the Peptide Identification Framework on the Results of Fast Photochemical Oxidation of Protein Analysis.
Journal of Proteome Research. Roč. 23, č. 2 (2023), s. 609-617. ISSN 1535-3893. E-ISSN 1535-3907
EU Projects: European Commission(XE) 823839 - EPIC-XS
Institutional support: RVO:61388971
Keywords : mass-spectrometry * exchange * fpop * searchengine * structural proteomics
OECD category: Microbiology
Impact factor: 4.4, year: 2022
Method of publishing: Open access
https://pubs.acs.org/doi/10.1021/acs.jproteome.3c00390
Permanent Link: https://hdl.handle.net/11104/0351128 - 3.0580617 - ÚOCHB 2025 RIV US eng J - Journal Article
Bouyssié, D. - Altiner, P. - Capella-Gutierrez, S. - Fernandez, J. M. - Hagemeijer, Y. P. - Horvatovich, P. - Hubálek, Martin - Levander, F. - Mauri, P. - Palmblad, M. - Raffelsberger, W. - Rodriguez-Navas, L. - Di Silvestre, D. - Kunkli, B. T. - Uszkoreit, J. - Vandenbrouck, Y. - Vizcaíno, J. A. - Winkelhardt, D. - Schwämmle, V.
WOMBAT-P: Benchmarking Label-Free Proteomics Data Analysis Workflows.
Journal of Proteome Research. Roč. 23, č. 1 (2024), s. 418-429. ISSN 1535-3893. E-ISSN 1535-3907
Institutional support: RVO:61388963
Keywords : workflow * data analysis * benchmarking * label-free proteomics * quality metrics
OECD category: Analytical chemistry
Impact factor: 4.4, year: 2022
Method of publishing: Limited access
https://doi.org/10.1021/acs.jproteome.3c00636
Permanent Link: https://hdl.handle.net/11104/0349387
Research data: CRAN - 4.0570912 - ÚCHP 2024 RIV US eng J - Journal Article
Michálková, Lenka - Horník, Štěpán - Sýkora, J. - Setnička, V. - Bunganič, B.
Prediction of Pathologic Change Development in the Pancreas Associated with Diabetes Mellitus Assessed by NMR Metabolomics.
Journal of Proteome Research. Roč. 22, č. 6 (2023), s. 1936-1946. ISSN 1535-3893. E-ISSN 1535-3907
Institutional support: RVO:67985858
Keywords : pancreatic cancer * NMR metabolomics * diabetes mellitus * prediction of pathologic changes
OECD category: Analytical chemistry
Impact factor: 4.4, year: 2022
Method of publishing: Open access
https://pubs.acs.org/doi/pdf/10.1021/acs.jproteome.3c00047
Permanent Link: https://hdl.handle.net/11104/0342241File Download Size Commentary Version Access acs.jproteome.3c00047.pdf 0 8.7 MB Publisher’s postprint open-access - 5.0556830 - MBÚ 2023 RIV US eng J - Journal Article
Tomášová, Petra - Procházková, Petra - Roubalová, Radka - Dvořák, Jiří - Tlaskalová-Hogenová, Helena - Čermáková, Martina - Pelantová, Helena - Šedivá, Blanka - Vecka, M. - Papežová, H. - Kuzma, Marek
NMR- and MS-Based Untargeted Metabolomic Study of Stool and Serum Samples from Patients with Anorexia Nervosa.
Journal of Proteome Research. Roč. 21, č. 3 (2022), s. 778-787. ISSN 1535-3893. E-ISSN 1535-3907
R&D Projects: GA MZd(CZ) NV17-28905A; GA MZd(CZ) NV18-01-00040
Institutional support: RVO:61388971
Keywords : oxidative stress * association * antioxidant * leptin * anorexia nervosa * metabolomics * mass spectrometry * nuclear magnetic resonance
OECD category: Microbiology
Impact factor: 4.4, year: 2022
Method of publishing: Limited access
https://pubs.acs.org/doi/10.1021/acs.jproteome.1c00537
Permanent Link: http://hdl.handle.net/11104/0331270 - 6.0542387 - MBÚ 2022 RIV US eng J - Journal Article
Kukačka, Zdeněk - Rosůlek, Michal - Jelínek, Jan - Slavata, Lukáš - Kavan, Daniel - Novák, Petr
LinX: A Software Tool for Uncommon Cross-Linking Chemistry.
Journal of Proteome Research. Roč. 20, č. 4 (2021), s. 2021-2027. ISSN 1535-3893. E-ISSN 1535-3907
R&D Projects: GA ČR(CZ) GA19-16084S; GA MŠMT(CZ) LH15010; GA MŠMT(CZ) LQ1604; GA MŠMT(CZ) LD15089; GA MŠMT(CZ) ED1.1.00/02.0109
EU Projects: European Commission(XE) 731077 - EU_FT-ICR_MS
Institutional support: RVO:61388971
Keywords : mass spectrometry * high resolution * chemical cross-linking * proteins
OECD category: Biochemistry and molecular biology
Impact factor: 5.370, year: 2021
Method of publishing: Open access
https://pubs.acs.org/doi/10.1021/acs.jproteome.0c00858
Permanent Link: http://hdl.handle.net/11104/0319810 - 7.0540081 - ÚCHP 2022 RIV US eng J - Journal Article
Michálková, Lenka - Horník, Štěpán - Sýkora, Jan - Habartová, L. - Setnička, V. - Bunganič, B.
Early Detection of Pancreatic Cancer in Type 2 Diabetes Mellitus Patients Based on 1H NMR Metabolomics.
Journal of Proteome Research. Roč. 20, č. 3 (2021), s. 1744-1753. ISSN 1535-3893. E-ISSN 1535-3907
Institutional support: RVO:67985858
Keywords : pancreatic cancer * diabetes mellitus * pancreatogenic diabetes * NMR metabolomics
OECD category: Medical engineering
Impact factor: 5.370, year: 2021
Method of publishing: Open access with time embargo
Permanent Link: http://hdl.handle.net/11104/0318607File Download Size Commentary Version Access 0540081.pdf 1 3.1 MB Publisher’s postprint open-access - 8.0536067 - MBÚ 2021 RIV US eng J - Journal Article
Tomášová, Petra - Čermáková, Martina - Pelantová, Helena - Vecka, M. - Kratochvílová, H. - Lipš, M. - Lindner, J. - Ivák, P. - Netuka, I. - Šedivá, Blanka - Haluzník, M. - Kuzma, Marek
Lipid Profiling in Epicardial and Subcutaneous Adipose Tissue of Patients with Coronary Artery Disease.
Journal of Proteome Research. Roč. 19, č. 10 (2020), s. 3993-4003. ISSN 1535-3893. E-ISSN 1535-3907
R&D Projects: GA MŠMT(CZ) LO1509
Institutional support: RVO:61388971
Keywords : epicardial adipose tissue * subcutaneous adipose tissue * coronary artery disease
OECD category: Microbiology
Impact factor: 4.466, year: 2020
Method of publishing: Limited access
https://pubs.acs.org/doi/abs/10.1021/acs.jproteome.0c00269
Permanent Link: http://hdl.handle.net/11104/0313916 - 9.0533031 - MBÚ 2021 RIV US eng J - Journal Article
Novák, Jakub - Fabrik, I. - Jurnečka, David - Holubová, Jana - Staněk, Ondřej - Šebo, Peter
Bordetella pertussis Acetylome is Shaped by Lysine Deacetylase Bkd1.
Journal of Proteome Research. Roč. 19, č. 9 (2020), s. 3680-3696. ISSN 1535-3893. E-ISSN 1535-3907
R&D Projects: GA ČR(CZ) GX19-27630X; GA ČR(CZ) GA18-20621S; GA MZd(CZ) NV16-28126A; GA MŠMT(CZ) LM2018133
Institutional support: RVO:61388971
Keywords : Bordetella pertussis * acetylome * KDAC * deacetylation
OECD category: Microbiology
Impact factor: 4.466, year: 2020
Method of publishing: Limited access
https://pubs.acs.org/doi/abs/10.1021/acs.jproteome.0c00178
Permanent Link: http://hdl.handle.net/11104/0311530 - 10.0524232 - ÚIACH 2021 RIV US eng J - Journal Article
Laštovičková, Markéta - Strouhalová, Dana - Bobálová, Janette
Use of lectin-based affinity techniques in breast cancer glycoproteomics: A Review.
Journal of Proteome Research. Roč. 19, č. 5 (2020), s. 1885-1899. ISSN 1535-3893. E-ISSN 1535-3907
Grant - others:AV ČR(CZ) SAV-18-16
Program: Bilaterální spolupráce
Institutional support: RVO:68081715
Keywords : glycoproteins * lectin-based techniques * breast cancer
OECD category: Analytical chemistry
Impact factor: 4.466, year: 2020
Method of publishing: Limited access
Permanent Link: http://hdl.handle.net/11104/0308619File Download Size Commentary Version Access 0524232_IR.pdf 5 6.8 MB Author’s postprint require