Search results
- 1.0446264 - BFÚ 2016 RIV GB eng J - Journal Article
Školáková, Petra - Foldynová-Trantírková, Silvie - Bednářová, Klára - Fiala, R. - Vorlíčková, Michaela - Trantírek, L.
Unique C. elegans telomeric overhang structures reveal the evolutionarily conserved properties of telomeric DNA.
Nucleic Acids Research. Roč. 43, č. 9 (2015), s. 4733-4745. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA ČR(CZ) GA13-28310S; GA ČR(CZ) GAP205/12/0466
Institutional support: RVO:68081707 ; RVO:60077344
Keywords : NUCLEASE HYPERSENSITIVE ELEMENT * G-QUADRUPLEX STRUCTURES * I-MOTIF
Subject RIV: BO - Biophysics
Impact factor: 9.202, year: 2015
Permanent Link: http://hdl.handle.net/11104/0248257 - 2.0381618 - BC 2013 RIV GB eng J - Journal Article
Fessl, Tomáš - Adamec, František - Polívka, Tomáš - Foldynová-Trantírková, Silvie - Vácha, František - Trantírek, L.
Towards characterization of DNA structure under physiological conditions in vivo at the single-molecule level using single-pair FRET.
Nucleic Acids Research. Roč. 40, č. 16 (2012), s. 10. ISSN 0305-1048. E-ISSN 1362-4962
Institutional research plan: CEZ:AV0Z50510513; CEZ:AV0Z60220518
Keywords : in-cell FRET * fluorescence * DNA * nucleic acid * ATTO * in vivo
Subject RIV: BO - Biophysics
Impact factor: 8.278, year: 2012
Permanent Link: http://hdl.handle.net/11104/0212047 - 3.0375985 - BC 2013 RIV US eng J - Journal Article
Foldynová-Trantírková, Silvie - Wilcox, W. R. - Krejčí, Pavel
Sixteen Years and Counting: The Current Understanding of Fibroblast Growth Factor Receptor 3 (FGFR3) Signaling in Skeletal Dysplasias.
Human Mutation. Roč. 33, č. 1 (2012), s. 29-41. ISSN 1059-7794. E-ISSN 1098-1004
Grant - others:GA CR(CZ) GAP305/11/0752; GA CR(CZ) GA301/09/0587
Program: GA
Institutional research plan: CEZ:AV0Z60220518; CEZ:AV0Z50040507
Keywords : FGFR3 * chondrocyte * skeletal dysplasia * MAP kinase * FGF
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 5.213, year: 2012
http://onlinelibrary.wiley.com/doi/10.1002/humu.21636/pdf
Permanent Link: http://hdl.handle.net/11104/0208506 - 4.0368847 - BFÚ 2012 RIV US eng J - Journal Article
Fiala, R. - Špačková, Naďa - Foldynová-Trantírková, Silvie - Šponer, J. - Sklenář, V. - Trantírek, L.
NMR cross-correlated relaxation rates reveal ion coordination sites in DNA.
Journal of the American Chemical Society. Roč. 133, č. 35 (2011), s. 13790-13793. ISSN 0002-7863. E-ISSN 1520-5126
R&D Projects: GA MŠMT(CZ) LC06030; GA ČR(CZ) GAP208/11/1822
Institutional research plan: CEZ:AV0Z50040507; CEZ:AV0Z50040702; CEZ:AV0Z60220518
Keywords : NMR * molecular dynamics * ions
Subject RIV: BO - Biophysics
Impact factor: 9.907, year: 2011
Permanent Link: http://hdl.handle.net/11104/0203073 - 5.0364917 - BC 2012 RIV GB eng J - Journal Article
Hansel, R. - Loehr, F. - Foldynová-Trantírková, Silvie - Bamberg, E. - Trantírek, L. - Doetsch, V.
The parallel G-quadruplex structure of vertebrate telomeric repeat sequences is not the preferred folding topology under physiological conditions.
Nucleic Acids Research. Roč. 39, č. 13 (2011), 5768-5775. ISSN 0305-1048. E-ISSN 1362-4962
Institutional research plan: CEZ:AV0Z60220518
Keywords : MOLECULAR CROWDING CONDITIONS * INTRAMOLECULAR G-QUADRUPLEX * CELL NMR-SPECTROSCOPY * C-MYC PROMOTER * K+ SOLUTION * DNA * STABILITY * PROTEIN * POLYMORPHISM * HYDRATION
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 8.026, year: 2011
Permanent Link: http://hdl.handle.net/11104/0200279 - 6.0352336 - BC 2011 RIV GB eng J - Journal Article
Foldynová-Trantírková, Silvie - Sekyrová, Petra - Tmejová, Kateřina - Brumovská, E. - Bernatik, O. - Blankenfeldt, W. - Krejčí, Pavel - Kozubík, Alois - Doležal, Tomáš - Trantírek, Lukáš - Bryja, Vítězslav
Breast cancer-specific mutations in CK1epsilon inhibit Wnt/beta-catenin and activate the Wnt/Rac1/JNK and NFAT pathways to decrease cell adhesion and promote cell migration.
Breast Cancer Research. Roč. 2010, č. 3 (2010), R30. ISSN 1465-5411. E-ISSN 1465-542X
R&D Projects: GA ČR GA301/07/0814; GA ČR(CZ) GD204/09/H058
Grant - others:GA ČR(CZ) GA204/09/0498; GA ČR(CZ) GA301/09/0587; GA ČR(CZ) KJB501630801
Institutional research plan: CEZ:AV0Z60220518; CEZ:AV0Z50070508; CEZ:AV0Z50040507; CEZ:AV0Z50040702
Keywords : casein kinase 1 epsilon * Wnt signaling cascade * kinase activity * autophosphorylation
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 5.785, year: 2010
Permanent Link: http://hdl.handle.net/11104/0191864 - 7.0334908 - BC 2010 RIV US eng J - Journal Article
Hansel, R. - Foldynová, Silvie - Lohr, F. - Buck, J. - Bongartz, E. - Bamberg, E. - Schwalbe, H. - Dotsch, V. - Trantírek, Lukáš
Evaluation of Parameters Critical for Observing Nucleic Acids Inside Living Xenopus laevis Oocytes by In-Cell NMR Spectroscopy.
[Vyhodnocení parametrů kritických pro pozorování nukleových kyselin v prostředí živých oocytů Xenopus laevis pomocí in-cell NMR spektroskopie.]
Journal of the American Chemical Society. Roč. 131, č. 43 (2009), s. 15761-15768. ISSN 0002-7863. E-ISSN 1520-5126
R&D Projects: GA AV ČR KAN200100801
Institutional research plan: CEZ:AV0Z60220518
Keywords : in-cell NMR * nucleic acid * Xenopus laevis * DNA * RNA
Subject RIV: BO - Biophysics
Impact factor: 8.580, year: 2009
Permanent Link: http://hdl.handle.net/11104/0179517 - 8.0334906 - BC 2010 RIV US eng J - Journal Article
Foldynová-Trantírková, Silvie - Matulová, J. - Dötsch, V. - Löhr, F. - Cirstea, I. - Alexandov, K. - Breitling, R. - Lukeš, Julius - Trantírek, Lukáš
A Cost-effective Amino-acid-type Selective Isotope Labeling of Proteins Expressed in Leishmania tarentolae.
Journal of Biomolecular Structure & Dynamics. Roč. 26, č. 6 (2009), s. 755-761. ISSN 0739-1102
R&D Projects: GA ČR GP204/08/P585; GA AV ČR 1QS600220554; GA AV ČR KAN200100801; GA MŠMT 2B06129
Institutional research plan: CEZ:AV0Z60220518
Keywords : NMR * isotope labeling * protein expression * Leishmania * low-level enrichment
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 1.124, year: 2009
Permanent Link: http://hdl.handle.net/11104/0179515 - 9.0334873 - ÚOCHB 2010 RIV GB eng J - Journal Article
Sychrovský, Vladimír - Foldynová-Trantírková, Silvie - Špačková, Naďa - Robeyns, K. - Meervelt van, L. - Blankenfeldt, W. - Vokáčová, Zuzana - Šponer, Jiří - Trantírek, Lukáš
Revisiting the planarity of nucleic acid bases: Pyramidilization at glycosidic nitrogen in purine bases is modulated by orientation of glycosidic torsion.
Nucleic Acids Research. Roč. 37, č. 21 (2009), s. 7321-7331. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA AV ČR(CZ) IAA400040802; GA AV ČR IAA400550701; GA ČR GA203/09/1476; GA MŠMT(CZ) LC06030; GA AV ČR KAN200100801
Institutional research plan: CEZ:AV0Z40550506; CEZ:AV0Z60220518; CEZ:AV0Z50040507; CEZ:AV0Z50040702
Keywords : pyrimidalization * glycosidic torion angle
Subject RIV: CF - Physical ; Theoretical Chemistry
Impact factor: 7.479, year: 2009
Permanent Link: http://hdl.handle.net/11104/0179490 - 10.0091123 - BC 2008 RIV US eng J - Journal Article
Zamudio, J. R. - Mittra, B. - Foldynová-Trantírková, Silvie - Zeiner, G. M. - Lukeš, Julius - Bujnicki, J. M. - Sturm, N. R. - Campbell, D. A.
The 2’-O-ribose methyltransferase for cap 1 of spliced leader RNA and U1 small nuclear RNA in Trypanosoma brucei.
[2’-O-ribose methyltransferáza pro čepičku 1 spliced leader RNA a U1 malé jaderné RNA v Trypanosoma brucei.]
Molecular and Cellular Biology. Roč. 27, č. 17 (2007), s. 6084-6092. ISSN 0270-7306. E-ISSN 1098-5549
R&D Projects: GA MŠMT 2B06129; GA MŠMT LC07032
Institutional research plan: CEZ:AV0Z60220518
Keywords : methylation * Trypanosoma brucei * methyltransferase * RNA interference
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 6.420, year: 2007
Permanent Link: http://hdl.handle.net/11104/0151796