Search results
- 1.0583841 - FGÚ 2025 RIV CH eng J - Journal Article
Čajka, Tomáš - Hricko, Jiří - Rakušanová, Stanislava - Brejchová, Kristýna - Nováková, Michaela - Rudl Kulhavá, Lucie - Holá, Veronika - Paučová, Michaela - Fiehn, O. - Kuda, Ondřej
Hydrophilic Interaction Liquid Chromatography–Hydrogen/Deuterium Exchange–Mass Spectrometry (HILIC-HDX-MS) for Untargeted Metabolomics.
International Journal of Molecular Sciences. Roč. 25, č. 5 (2024), č. článku 2899. ISSN 1661-6596
R&D Projects: GA MŠMT(CZ) LX22NPO5104; GA ČR(CZ) GA20-21114S; GA ČR(CZ) GA21-00477S
Research Infrastructure: e-INFRA CZ II - 90254
Institutional support: RVO:67985823
Keywords : metabolomics * liquid chromatography * mass spectrometry * hydrogen/deuterium exchange * unknown identification
OECD category: Analytical chemistry
Impact factor: 5.6, year: 2022
Method of publishing: Open access
https://www.mdpi.com/1422-0067/25/5/2899
Permanent Link: https://hdl.handle.net/11104/0351844File Download Size Commentary Version Access 24_0026_0583841.pdf 4 849.4 KB Publisher’s postprint open-access - 2.0583365 - FGÚ 2025 RIV US eng J - Journal Article
Ferrell, M. - Wang, Z. - Anderson, J.T. - Li, X. S. - Witkowski, M. - DiDonato, J. A. - Hilser, J. R. - Hartiala, J. A. - Haghikia, A. - Čajka, Tomáš - Fiehn, O. - Sangwan, N. - Demuth, I. - König, M. - Steinhagen-Thiessen, E. - Landmesser, U. - Tang, W.H.W. - Allayee, H. - Hazen, S.L.
A terminal metabolite of niacin promotes vascular inflammation and contributes to cardiovascular disease risk.
Nature Medicine. Roč. 30, č. 2 (2024), s. 424-434. ISSN 1078-8956. E-ISSN 1546-170X
Institutional support: RVO:67985823
Keywords : cardiovascular diseases * metabolomics * risk factors
OECD category: Cardiac and Cardiovascular systems
Impact factor: 82.9, year: 2022
https://doi.org/10.1038/s41591-023-02793-8
Permanent Link: https://hdl.handle.net/11104/0351333 - 3.0580216 - FGÚ 2024 RIV US eng J - Journal Article
Nemet, I. - Funabashi, M. - Li, X. S. - Dwidar, M. - Sangwan, N. - Skye, S. M. - Romano, K. A. - Čajka, Tomáš - Needham, B. D. - Mazmanian, S. K. - Hajjar, A. M. - Rey, F. E. - Fiehn, O. - Tang, W.H.W. - Fischbach, M. A. - Hazen, S.L.
Microbe-derived uremic solutes enhance thrombosis potential in the host.
mBio. Roč. 14, č. 6 (2023), č. článku e0133123. ISSN 2161-2129. E-ISSN 2150-7511
Institutional support: RVO:67985823
Keywords : gut microbes * uremic toxins * p-cresol sulfate * indoxyl sulfate * cardiovascular disease * mortality
OECD category: Cardiac and Cardiovascular systems
Impact factor: 6.4, year: 2022
Method of publishing: Open access
https://doi.org/10.1128/mbio.01331-23
Permanent Link: https://hdl.handle.net/11104/0348968 - 4.0574879 - FGÚ 2024 RIV CH eng J - Journal Article
Čajka, Tomáš - Hricko, Jiří - Rudl Kulhavá, Lucie - Paučová, Michaela - Nováková, Michaela - Fiehn, O. - Kuda, Ondřej
Exploring the Impact of Organic Solvent Quality and Unusual Adduct Formation during LC-MS-Based Lipidomic Profiling.
Metabolites. Roč. 13, č. 9 (2023), č. článku 966. E-ISSN 2218-1989
R&D Projects: GA MZd(CZ) NU20-01-00186; GA MZd(CZ) NU22-02-00161; GA ČR(CZ) GA20-21114S; GA MŠMT(CZ) LTAUSA19124; GA MŠMT(CZ) LX22NPO5104; GA ČR(CZ) GA21-00477S
Grant - others:AV ČR(CZ) LQ200111901
Program: Prémie Lumina quaeruntur
Research Infrastructure: e-INFRA CZ - 90140
Institutional support: RVO:67985823
Keywords : lipidomics * metabolomics * liquid chromatography * mass spectrometry * method development * solvent quality * adduct formation * MS/MS annotation * misidentification * lipids
OECD category: Analytical chemistry
Impact factor: 4.1, year: 2022
Method of publishing: Open access
https://www.mdpi.com/2218-1989/13/9/966
Permanent Link: https://hdl.handle.net/11104/0344811File Download Size Commentary Version Access 23_0075_0574879.pdf 4 2.4 MB Publisher’s postprint open-access - 5.0571360 - FGÚ 2024 RIV CH eng J - Journal Article
Hricko, Jiří - Rudl Kulhavá, Lucie - Paučová, Michaela - Nováková, Michaela - Kuda, Ondřej - Fiehn, O. - Čajka, Tomáš
Short-Term Stability of Serum and Liver Extracts for Untargeted Metabolomics and Lipidomics.
Antioxidants. Roč. 12, č. 5 (2023), č. článku 986. E-ISSN 2076-3921
R&D Projects: GA MŠMT(CZ) LX22NPO5104; GA MZd(CZ) NU20-01-00186; GA MZd(CZ) NU22-02-00161; GA ČR(CZ) GA21-00477S; GA MŠMT(CZ) LTAUSA19124
Research Infrastructure: e-INFRA CZ - 90140
Institutional support: RVO:67985823
Keywords : metabolomics * lipidomics * stability * shipping * oxidation * serum * liver * tissue * liquid chromatography * mass spectrometry * LC-MS
OECD category: Endocrinology and metabolism (including diabetes, hormones)
Impact factor: 7, year: 2022
Method of publishing: Open access
https://www.mdpi.com/2076-3921/12/5/986
Permanent Link: https://hdl.handle.net/11104/0342602File Download Size Commentary Version Access 23_0029_0571360.pdf 4 2.2 MB Publisher’s postprint open-access - 6.0570701 - FGÚ 2024 RIV US eng J - Journal Article
Witkowski, M. - Nemet, I. - Alamri, H. - Wilcox, J. - Gupta, N. - Nimer, N. - Haghikia, A. - Li, X. S. - Wu, Y. - Saha, P. P. - Demuth, I. - König, M. - Steinhagen-Thiessen, E. - Čajka, Tomáš - Fiehn, O. - Landmesser, U. - Tang, W.H.W. - Hazen, S.L.
The artificial sweetener erythritol and cardiovascular event risk.
Nature Medicine. Roč. 29, March (2023), s. 710-718. ISSN 1078-8956. E-ISSN 1546-170X
Institutional support: RVO:67985823
Keywords : sweeteners * erythritol * metabolomics * cardiovascular event risk
OECD category: Cardiac and Cardiovascular systems
Impact factor: 82.9, year: 2022
Method of publishing: Limited access
https://doi.org/10.1038/s41591-023-02223-9
Permanent Link: https://hdl.handle.net/11104/0342032 - 7.0570438 - FGÚ 2024 RIV NL eng J - Journal Article
Berg, A. L. - Showalter, M. R. - Kosaisawe, N. - Hu, M. - Stephens, N. C. - Sa, M. - Heil, H. - Castro, N. - Chen, J. J. - VanderVorst, K. - Wheeler, M. R. - Rabow, Z. - Čajka, Tomáš - Albeck, J. - Fiehn, O. - Carraway III, K. L.
Cellular transformation promotes the incorporation of docosahexaenoic acid into the endolysosome-specific lipid bis(monoacylglycerol)phosphate in breast cancer.
Cancer letters. Roč. 557, 31 March (2023), č. článku 216090. ISSN 0304-3835. E-ISSN 1872-7980
Institutional support: RVO:67985823
Keywords : breast cancer * bis(monoacylglycerol)phosphate * BMP * lipidomics * lysosomal membrane permeabilization * polyunsaturated fatty acids * reactive oxygen species
OECD category: Oncology
Impact factor: 9.7, year: 2022
Method of publishing: Limited access
https://doi.org/10.1016/j.canlet.2023.216090
Permanent Link: https://hdl.handle.net/11104/0341735 - 8.0570367 - FGÚ 2024 RIV GB eng J - Journal Article
Rakušanová, Stanislava - Fiehn, O. - Čajka, Tomáš
Toward building mass spectrometry-based metabolomics and lipidomics atlases for biological and clinical research.
TrAC-Trends in Analytical Chemistry. Roč. 158, January (2023), č. článku 116825. ISSN 0165-9936. E-ISSN 1879-3142
R&D Projects: GA MZd(CZ) NU20-01-00186; GA MZd(CZ) NU22-02-00161; GA MŠMT(CZ) LX22NPO5104; GA MŠMT(CZ) LTAUSA19124; GA ČR(CZ) GA20-21114S; GA ČR(CZ) GA21-00477S
Institutional support: RVO:67985823
Keywords : metabolomics * lipidomics * analytical methods * mass spectrometry * atlas * database
OECD category: Analytical chemistry
Impact factor: 13.1, year: 2022
Method of publishing: Open access
https://doi.org/10.1016/j.trac.2022.116825
Permanent Link: https://hdl.handle.net/11104/0341665File Download Size Commentary Version Access 23_0008_0570367.pdf 1 3 MB Publisher’s postprint open-access - 9.0533088 - FGÚ 2021 RIV US eng J - Journal Article
Tsugawa, H. - Ikeda, K. - Takahashi, M. - Satoh, A. - Mori, Y. - Uchino, H. - Okahashi, N. - Yamada, Y. - Tada, I. - Bonini, P. - Higashi, Y. - Okazaki, Y. - Zhou, Z. - Zhu, Z.-J. - Koelmel, J. - Čajka, Tomáš - Fiehn, O. - Saito, K. - Arita, Mas. - Arita, Mak.
A lipidome atlas in MS-DIAL 4.
Nature Biotechnology. Roč. 38, č. 10 (2020), s. 1159-1163. ISSN 1087-0156. E-ISSN 1546-1696
R&D Projects: GA ČR(CZ) GA20-21114S; GA MŠMT(CZ) LTAUSA19124
Institutional support: RVO:67985823
Keywords : lipidomics * metabolomics * data processing * software
OECD category: Analytical chemistry
Impact factor: 54.908, year: 2020
Method of publishing: Limited access
https://doi.org/10.1038/s41587-020-0531-2
Permanent Link: http://hdl.handle.net/11104/0311579 - 10.0524906 - FGÚ 2021 RIV US eng J - Journal Article
Nemet, I. - Saha, P. P. - Gupta, N. - Zhu, W. - Romano, K. A. - Skye, S. M. - Čajka, Tomáš - Mohan, M. L. - Li, L. - Wu, Y. - Funabashi, M. - Ramer-Tait, A. E. - Prasad, S. V. N. - Fiehn, O. - Rey, F. E. - Tang, W.H.W. - Fischbach, M. A. - DiDonato, J. A. - Hazen, S.L.
A Cardiovascular Disease-Linked Gut Microbial Metabolite Acts via Adrenergic Receptors.
Cell. Roč. 180, č. 5 (2020), s. 862-877. ISSN 0092-8674. E-ISSN 1097-4172
Institutional support: RVO:67985823
Keywords : gut microbe * metabolomics * cardiovascular disease * GPCR * adrenergic receptors * thrombosis
OECD category: Cardiac and Cardiovascular systems
Impact factor: 41.584, year: 2020
Method of publishing: Limited access
https://doi.org/10.1016/j.cell.2020.02.016
Permanent Link: http://hdl.handle.net/11104/0309134