Search results

  1. 1.
    0583145 - BTÚ 2024 RIV CH eng J - Journal Article
    Šimková, Kateřina - Naraine, Ravindra - Vintr, J. - Soukup, V. - Šindelka, Radek
    RNA localization during early development of the axolotl.
    Frontiers in Cell and Developmental Biology. Roč. 11, OCT 19 2023 (2023), č. článku 1260795. ISSN 2296-634X. E-ISSN 2296-634X
    R&D Projects: GA ČR(CZ) GA20-23836S
    Institutional support: RVO:86652036
    Keywords : maternal messenger-rna * germ plasm component * vegetal cortex * mitochondrial cloud * animal-vegetal axis
    OECD category: Developmental biology
    Impact factor: 5.5, year: 2022
    Method of publishing: Open access
    https://www.frontiersin.org/articles/10.3389/fcell.2023.1260795/full
    Permanent Link: https://hdl.handle.net/11104/0351334
     
     
  2. 2.
    0563714 - BTÚ 2023 RIV CH eng J - Journal Article
    Iegorova, Viktoriia - Naraine, Ravindra - Pšenička, M. - Zelazowska, M. - Šindelka, Radek
    Comparison of RNA localization during oogenesis within Acipenser ruthenus and Xenopus laevis.
    Frontiers in Cell and Developmental Biology. Roč. 10, SEP 20 2022 (2022), č. článku 982732. ISSN 2296-634X. E-ISSN 2296-634X
    R&D Projects: GA ČR(CZ) GA19-11313S
    Research Infrastructure: CENAKVA - 90099
    Institutional support: RVO:86652036
    Keywords : oogenesis * RNA localization * Xenopus laevis * Acipenser ruthenus * TOMO-Seq
    OECD category: Developmental biology
    Impact factor: 5.5, year: 2022
    Method of publishing: Open access
    https://www.frontiersin.org/articles/10.3389/fcell.2022.982732/full
    Permanent Link: https://hdl.handle.net/11104/0335725
     
     
  3. 3.
    0559401 - BTÚ 2023 RIV US eng J - Journal Article
    Naraine, Ravindra - Iegorova, Viktoriia - Abaffy, Pavel - Franěk, R. - Soukup, V. - Pšenička, M. - Šindelka, Radek
    Evolutionary conservation of maternal RNA localization in fishes and amphibians revealed by TOMO-Seq.
    Developmental Biology. Roč. 489, SEP 2022 (2022), s. 146-160. ISSN 0012-1606. E-ISSN 1095-564X
    R&D Projects: GA ČR(CZ) GA19-11313S
    Institutional support: RVO:86652036
    Keywords : Egg * RNA localization * TOMO-Seq * Amphibians * Fishes * evo devo
    OECD category: Biochemistry and molecular biology
    Impact factor: 2.7, year: 2022
    Method of publishing: Open access
    https://www.sciencedirect.com/science/article/pii/S0012160622001300?via%3Dihub
    Permanent Link: https://hdl.handle.net/11104/0340732
     
     
  4. 4.
    0558972 - BTÚ 2023 RIV CH eng J - Journal Article
    Gazo, I. - Naraine, Ravindra - Lebeda, I. - Tomcala, Al. - Dietrich, M. - Franěk, R. - Pšenička, M. - Šindelka, Radek
    Transcriptome and Proteome Analyses Reveal Stage-Specific DNA Damage Response in Embryos of Sturgeon (Acipenser ruthenus).
    International Journal of Molecular Sciences. Roč. 23, č. 12 (2022), č. článku 6392. E-ISSN 1422-0067
    R&D Projects: GA ČR(CZ) GA19-11313S
    Institutional support: RVO:86652036
    Keywords : fish * sturgeon * embryo * DNA damage response * omics
    OECD category: Biochemistry and molecular biology
    Impact factor: 5.6, year: 2022
    Method of publishing: Open access
    https://www.mdpi.com/1422-0067/23/12/6392
    Permanent Link: https://hdl.handle.net/11104/0332508
     
     
  5. 5.
    0557875 - BTÚ 2023 RIV US eng J - Journal Article
    Magalhaes-Novais, Silvia - Blecha, Jan - Naraine, Ravindra - Mikesova, Jana - Abaffy, Pavel - Pecinová, Alena - Miloševič, Mirko - Bohuslavová, Romana - Procházka, Jan - Khan, S. - Novotná, Eliška - Šindelka, Radek - Machan, R. - Dewerchin, M. - Vlčák, Erik - Kalucka, J. - Štemberková-Hubáčková, Soňa - Benda, A. - Goveia, J. - Mráček, Tomáš - Bařinka, Cyril - Carmeliet, P. - Neužil, Jiří - Rohlenová, Kateřina - Rohlena, Jakub
    Mitochondrial respiration supports autophagy to provide stress resistance during quiescence.
    Autophagy. Roč. 18, č. 10 (2022), s. 2409-2426. ISSN 1554-8627. E-ISSN 1554-8635
    R&D Projects: GA ČR(CZ) GA20-18513S; GA ČR GA17-24441S; GA ČR(CZ) GA20-05942S; GA ČR(CZ) GA18-02550S; GA ČR(CZ) GX21-04607X; GA ČR(CZ) GA22-34507S; GA MZd(CZ) NV17-30138A; GA MZd(CZ) NV17-32727A; GA MZd(CZ) NU21-03-00545; GA MZd(CZ) NU20J-02-00035; GA MŠMT(CZ) LM2018129; GA MŠMT(CZ) LM2015040; GA MŠMT(CZ) LM2018126; GA MŠMT EF18_046/0015861; GA MŠMT(CZ) EF16_013/0001775; GA MŠMT(CZ) EF18_046/0016045
    Research Infrastructure: Czech-BioImaging II - 90129; CCP II - 90126
    Institutional support: RVO:86652036 ; RVO:68378050 ; RVO:67985823
    Keywords : ATG4B * cell death * biosynthesis * electron transport chain
    OECD category: Cell biology
    Impact factor: 13.3, year: 2022
    Method of publishing: Open access
    https://www.tandfonline.com/doi/full/10.1080/15548627.2022.2038898
    Permanent Link: http://hdl.handle.net/11104/0331732
     
     
  6. 6.
    0540647 - BTÚ 2021 RIV SE eng J - Journal Article
    Naraine, Ravindra - Abaffy, Pavel - Šídová, Monika - Tománková, Silvie - Pocherniaieva, K. - Smolík, Ondřej - Kubista, Mikael - Pšenička, M. - Šindelka, Radek
    NormQ: RNASeq normalization based on RT-qPCR derived size factors.
    Computational and Structural Biotechnology Journal. Roč. 18, č. 2020 (2020), s. 1173-1181. ISSN 2001-0370. E-ISSN 2001-0370
    R&D Projects: GA ČR GA17-24441S; GA ČR(CZ) GA19-11313S; GA MŠMT(CZ) ED1.1.00/02.0109
    Institutional support: RVO:86652036
    Keywords : seq * tomography * Transcriptomics * RNASeq * Normalization * TOMOSeq * DESeq * Median-of-ratios
    OECD category: Biochemistry and molecular biology
    Impact factor: 7.271, year: 2020
    Method of publishing: Open access
    https://www.sciencedirect.com/science/article/pii/S2001037020302737?via%3Dihub
    Permanent Link: http://hdl.handle.net/11104/0318266
     
     
  7. 7.
    0517499 - BTÚ 2020 RIV US eng J - Journal Article
    Abaffy, Pavel - Tománková, Silvie - Naraine, Ravindra - Kubista, Mikael - Šindelka, Radek
    The role of nitric oxide during embryonic wound healing.
    BMC Genomics. Roč. 20, č. 1 (2019), č. článku 815. ISSN 1471-2164. E-ISSN 1471-2164
    R&D Projects: GA MŠMT(CZ) ED1.1.00/02.0109; GA ČR GA17-24441S
    Institutional support: RVO:86652036
    Keywords : Xenopus laevis * Nitric oxide * Wound healing * Transcriptome
    OECD category: Biochemistry and molecular biology
    Impact factor: 3.594, year: 2019
    Method of publishing: Open access
    https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-019-6147-6
    Permanent Link: http://hdl.handle.net/11104/0302837
     
     
  8. 8.
    0496977 - BTÚ 2019 RIV GB eng J - Journal Article
    Šindelka, Radek - Abaffy, Pavel - Qu, Y. - Tománková, Silvie - Šídová, Monika - Naraine, Ravindra - Kolář, Michal - Peuchen, E. - Sun, L. - Dovichi, N. - Kubista, Mikael
    Asymmetric distribution of biomolecules of maternal origin in the Xenopus laevis egg and their impact on the developmental plan.
    Scientific Reports. Roč. 8, MAY 29 2018 (2018), č. článku 8315. ISSN 2045-2322. E-ISSN 2045-2322
    R&D Projects: GA ČR(CZ) GA16-07500S; GA MŠMT(CZ) LH15074; GA MŠMT(CZ) LM2015047; GA MŠMT(CZ) ED1.1.00/02.0109
    Institutional support: RVO:86652036 ; RVO:68378050
    Keywords : CELL MASS-SPECTROMETRY * BICOID MESSENGER-RNA * SAMPLE PREPARATION
    OECD category: Other biological topics; Other biological topics (UMG-J)
    Impact factor: 4.011, year: 2018
    Permanent Link: http://hdl.handle.net/11104/0289597
     
     
  9. 9.
    0492386 - BTÚ 2019 RIV GB eng J - Journal Article
    Bezawork-Geleta, A. - Wen, H. - Dong, L. F. - Yan, B. - Vider, J. - Boukalová, Štěpána - Krobová, Linda - Váňová, Kateřina - Zobalová, Renata - Sobol, Margaryta - Hozák, Pavel - Novais, Silvia Magalhaes - Caisova, V. - Abaffy, Pavel - Naraine, Ravindra - Pang, Y. - Zaw, T. - Zhang, P. - Šindelka, Radek - Kubista, Mikael - Zuryn, S. - Molloy, M. P. - Berridge, M.V. - Pacak, K. - Rohlena, Jakub - Park, S. - Neužil, Jiří
    Alternative assembly of respiratory complex II connects energy stress to metabolic checkpoints.
    Nature Communications. Roč. 9, JUN 7 2018 (2018), č. článku 2221. E-ISSN 2041-1723
    R&D Projects: GA ČR GA15-02203S; GA MZd NV17-30138A; GA ČR GA17-20904S; GA MŠMT(CZ) LM2015062; GA MŠMT(CZ) ED1.1.00/02.0109; GA ČR GA16-22823S
    Institutional support: RVO:86652036 ; RVO:68378050
    Keywords : ELECTRON-TRANSPORT CHAIN * PYRUVATE-KINASE M2 * MITOCHONDRIAL-DNA MUTATIONS
    OECD category: Biochemistry and molecular biology; Biochemistry and molecular biology (UMG-J)
    Impact factor: 11.878, year: 2018
    Permanent Link: http://hdl.handle.net/11104/0286410
     
     


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