Search results
- 1.0579619 - ÚEM 2024 RIV US eng J - Journal Article
Pardini, B. - Ferrero, G. - Tarallo, S. - Gallo, G. - Francavilla, A. - Licheri, N. - Trompetto, M. - Clerico, G. - Senore, P. - Vymetálková, Veronika - Vodičková, Ludmila - Liška, V. - Vyčítal, O. - Levý, O. - Macinga, P. - Hucl, T. - Budinská, E. - Vodička, Pavel - Cordero, F. - Naccarati, A.
A Fecal MicroRNA Signature by Small RNA Sequencing Accurately Distinguishes Colorectal Cancers: Results From a Multicenter Study.
Gastroenterology. Roč. 165, č. 3 (2023), s. 582-599. ISSN 0016-5085. E-ISSN 1528-0012
R&D Projects: GA ČR(CZ) GA17-16857S; GA ČR(CZ) GA22-05942S; GA MZd(CZ) NV18-03-00199; GA MŠMT LX22NPO5102
Institutional support: RVO:68378041
Keywords : Stool MicroRNAs * Noninvasive Diagnosis * Small RNA Sequencing * Colorectal Cancer * Precancerous Lesions * Machine Learning
OECD category: Biochemistry and molecular biology
Impact factor: 25.7, year: 2023
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S0016508523008119?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0348441File Download Size Commentary Version Access Pardini 2023.pdf 1 47.9 MB Publisher’s postprint open-access - 2.0539307 - ÚEM 2021 RIV GB eng J - Journal Article
Vymetálková, Veronika - Rosa, F. - Susová, S. - Bendová, Petra - Levý, M. - Buchler, T. - Král, J. - Bártů, Linda - Vodičková, Ludmila - Hughes, D.J. - Souček, P. - Naccarati, Alessio - Kumar, R. - Vodička, Pavel - Pardini, B.
Expression quantitative trait loci in ABC transporters are associated with survival in 5-FU treated colorectal cancer patients.
Mutagenesis. Roč. 35, č. 3 (2020), s. 273-281. ISSN 0267-8357. E-ISSN 1464-3804
R&D Projects: GA MZd(CZ) NV19-09-00237; GA ČR(CZ) GA17-16857S
Institutional support: RVO:68378041
Keywords : class-i antigen * down-regulation * gene-expression
OECD category: Pharmacology and pharmacy
Impact factor: 3.000, year: 2020
Method of publishing: Limited access
https://academic.oup.com/mutage/article-abstract/35/3/273/5699895?redirectedFrom=fulltext
Permanent Link: http://hdl.handle.net/11104/0316998 - 3.0539079 - ÚEM 2021 RIV GB eng J - Journal Article
Francavilla, A. - Turoczi, S. - Tarallo, S. - Vodička, Pavel - Pardini, B. - Naccarati, Alessio
Exosomal microRNAs and other non-coding RNAs as colorectal cancer biomarkers: a review.
Mutagenesis. Roč. 35, č. 3 (2020), s. 243-260. ISSN 0267-8357. E-ISSN 1464-3804
R&D Projects: GA ČR(CZ) GA17-16857S; GA MZd(CZ) NV15-27580A
Institutional support: RVO:68378041
Keywords : extracellular vesicles * circulating micrornas * invasion
OECD category: Oncology
Impact factor: 3.000, year: 2020
Method of publishing: Open access
https://academic.oup.com/mutage/article/35/3/243/5648190
Permanent Link: http://hdl.handle.net/11104/0316831 - 4.0518155 - ÚEM 2020 RIV US eng J - Journal Article
Thomas, A.M. - Manghi, P. - Asnicar, F. - Pasolli, E. - Armanini, F. - Zolfo, M. - Beghini, F. - Manara, S. - Karcher, N. - Pozzi, Ch. - Gandini, S. - Serrano, D. - Tarallo, S. - Francavilla, A. - Gallo, G. - Trompetto, M. - Ferrero, G. - Mizutani, S. - Shiroma, H. - Shiba, S. - Shibata, T. - Yachida, S. - Yamada, T. - Wirbel, J. - Schrotz-King, P. - Ulrich, C. M. - Brenner, H. - Arumugam, M. - Bork, P. - Zeller, G. - Cordero, F. - Dias-Neto, E. - Setubal, J.C. - Tett, A. - Naccarati, Alessio - Segata, N.
Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation.
Nature Medicine. Roč. 25, č. 4 (2019), s. 667-678. ISSN 1078-8956. E-ISSN 1546-170X
R&D Projects: GA ČR(CZ) GA17-16857S
Institutional support: RVO:68378041
Keywords : human gut microbiome * read alignment * risk
OECD category: Oncology
Impact factor: 36.130, year: 2019
Method of publishing: Limited access
https://www.nature.com/articles/s41591-019-0405-7
Permanent Link: http://hdl.handle.net/11104/0303330 - 5.0518088 - ÚEM 2021 RIV DE eng J - Journal Article
Pardini, B. - Corrado, A. - Paolicchi, E. - Cugliari, G. - Berndt, S. I. - Bezieau, S. - Bien, S.A. - Brenner, H. - Caan, B.J. - Campbell, P.T. - Casey, G. - Chan, A.T. - Chang-Claude, J. - Cotterchio, M. - Gala, M. - Gallinger, S.J. - Haile, R.W. - Harrison, T.A. - Hayes, R.B. - Hoffmeister, M. - Hopper, J.L. - Hsu, L. - Huyghe, J. - Jenkins, M.A. - Le Marchand, L. - Lin, Y. - Lindor, N.M. - Nan, H.M. - Newcomb, P.A. - Ogino, S. - Potter, J.D. - Schoen, R.E. - Slattery, M.L. - White, E. - Vodičková, Ludmila - Vymetálková, Veronika - Vodička, Pavel - Gemignani, F. - Peters, U. - Naccarati, Alessio - Landi, S.
DNA repair and cancer in colon and rectum: Novel players in genetic susceptibility.
International Journal of Cancer. Roč. 146, č. 2 (2020), s. 363-372. ISSN 0020-7136. E-ISSN 1097-0215
R&D Projects: GA MZd(CZ) NV15-27580A; GA MZd(CZ) NV17-30920A; GA ČR(CZ) GA17-16857S
Institutional support: RVO:68378041
Keywords : colon cancer * rectal cancer * DNA repair
OECD category: Epidemiology
Impact factor: 7.396, year: 2020
Method of publishing: Open access with time embargo
https://onlinelibrary.wiley.com/doi/abs/10.1002/ijc.32516
Permanent Link: http://hdl.handle.net/11104/0303279 - 6.0517910 - ÚEM 2020 RIV IT eng J - Journal Article
Francavilla, A. - Tarallo, S. - Pardini, Barbara - Naccarati, Alessio
Fecal microRNAs as non-invasive biomarkers for the detection of colorectal cancer: a systematic review.
Minerva Biotecnologica. Roč. 31, č. 1 (2019), s. 30-42. ISSN 1120-4826. E-ISSN 1827-160X
R&D Projects: GA ČR(CZ) GA17-16857S
Institutional support: RVO:68378041
Keywords : colorectal neoplasms * microRNAs * feces
OECD category: Human genetics
Impact factor: 1.178, year: 2019
Method of publishing: Limited access
https://www.minervamedica.it/en/journals/minerva-biotecnologica/article.php?cod=R04Y2019N01A0030
Permanent Link: http://hdl.handle.net/11104/0303149 - 7.0508392 - ÚEM 2020 RIV CH eng J - Journal Article
Jirásková, Kateřina - Hughes, D. J. - Březina, S. - Gumpenberger, T. - Veškrnová, V. - Buchler, T. - Schneiderová, B. - Levý, M. - Liška, V. - Vodenková, Soňa - Di Gaetano, C. - Naccarati, Alessio - Pardini, B. - Vymetálková, Veronika - Gsur, A. - Vodička, Pavel
Functional Polymorphisms in DNA Repair Genes Are Associated with Sporadic Colorectal Cancer Susceptibility and Clinical Outcome.
International Journal of Molecular Sciences. Roč. 20, č. 1 (2019), č. článku 97. ISSN 1422-0067. E-ISSN 1422-0067
R&D Projects: GA ČR(CZ) GA17-16857S; GA ČR(CZ) GA15-14789S
Institutional support: RVO:68378041
Keywords : DNA repair genes * functional single nucleotide polymorphism * colorectal cancer susceptibility * survival analysis
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 4.556, year: 2019
Method of publishing: Open access
https://www.mdpi.com/1422-0067/20/1/97
Permanent Link: http://hdl.handle.net/11104/0299340 - 8.0508391 - ÚEM 2020 RIV US eng J - Journal Article
Lu, S. - Catalano, C. - Huhn, S. - Pardini, B. - Bártů, Linda - Vymetálková, Veronika - Vodičková, Ludmila - Levý, M. - Buchler, T. - Hemminki, K. - Vodička, Pavel - Försti, A.
Single nucleotide polymorphisms within MUC4 are associated with colorectal cancer survival.
PLoS ONE. Roč. 14, č. 6 (2019), č. článku e0216666. ISSN 1932-6203. E-ISSN 1932-6203
R&D Projects: GA MZd(CZ) NV15-27580A; GA ČR(CZ) GA17-16857S
Institutional support: RVO:68378041
Keywords : MUC5AC hypomethylation * mucins * expression
OECD category: Human genetics
Impact factor: 2.740, year: 2019
Method of publishing: Open access
https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0216666
Permanent Link: http://hdl.handle.net/11104/0299343 - 9.0480904 - ÚEM 2018 RIV GB eng J - Journal Article
Schneiderová, B. - Naccarati, Alessio - Pardini, Barbara - Rosa, F. - Di Gaetano, C. - Jirásková, Kateřina - Opattová, Alena - Levý, M. - Veskrna, K. - Veškrnová, V. - Buchler, T. - Landi, S. - Vodička, Pavel - Vymetálková, Veronika
MicroRNA-binding site polymorphisms in genes involved in colorectal cancer etiopathogenesis and their impact on disease prognosis.
Mutagenesis. Roč. 32, č. 5 (2017), s. 533-542. ISSN 0267-8357. E-ISSN 1464-3804
R&D Projects: GA MZd(CZ) NV15-26535A; GA MŠMT(CZ) LD14050; GA MZd(CZ) NV15-27580A; GA ČR(CZ) GA17-16857S
Institutional support: RVO:68378041
Keywords : excision-repair genes * bladder-cancer * tumor-growth
OECD category: Biochemistry and molecular biology
Impact factor: 2.840, year: 2017
Permanent Link: http://hdl.handle.net/11104/0276796