Search results
- 1.0580593 - BC 2024 RIV US eng J - Journal Article
Prokopchuk, Galina - Butenko, Anzhelika - Dacks, Joel Bryan - Speijer, D. - Field, Mark Christian - Lukeš, Julius
Lessons from the deep: mechanisms behind diversification of eukaryotic protein complexes.
Biological Reviews. Roč. 98, č. 6 (2023), s. 1910-1927. ISSN 1464-7931. E-ISSN 1469-185X
R&D Projects: GA ČR(CZ) GA20-11585S; GA ČR(CZ) GX23-06479X; GA MŠMT(CZ) EF16_019/0000759
EU Projects: Wellcome Trust(GB) 204697/Z/16/Z
Institutional support: RVO:60077344
Keywords : mitochondrial contact site * cytochrome-c-oxidase * rab gtpase family * respiratory-chain * acanthamoeba-castellanii * trypanosoma-brucei * atp synthase * chlamydomonas-reinhardtii * succinate-dehydrogenase * tethering complexes * molecular evolution * evolutionary mechanisms * gene replacement * constructive neutral evolution * protein complexes * evolutionary divergence
OECD category: Cell biology
Impact factor: 10, year: 2022
Method of publishing: Open access
https://onlinelibrary.wiley.com/doi/10.1111/brv.12988
Permanent Link: https://hdl.handle.net/11104/0349356 - 2.0572381 - BC 2024 RIV GB eng J - Journal Article
Valach, M. - Moreira, S. - Petitjean, C. - Benz, Corinna - Butenko, Anzhelika - Flegontova, Olga - Nenarokova, Anna - Prokopchuk, Galina - Batstone, T. - Lapébie, P. - Lemogo, L. - Sarrasin, M. - Stretenowich, P. - Tripathi, Pragya - Yazaki, E. - Nara, T. - Henrissat, B. - Lang, B.F. - Gray, M.W. - Williams, T.A. - Lukeš, Julius - Burger, G.
Recent expansion of metabolic versatility in Diplonema papillatum, the model species of a highly speciose group of marine eukaryotes.
BMC BIOLOGY. Roč. 21, č. 1 (2023), č. článku 99. E-ISSN 1741-7007
R&D Projects: GA MŠMT(CZ) EF16_019/0000759; GA ČR(CZ) GA20-07186S; GA ČR(CZ) GX23-06479X; GA ČR(CZ) GA23-07695S
Grant - others:Gordon and Betty Moore Foundation(US) #9354
Program: Science
Institutional support: RVO:60077344
Keywords : Paradiplonema papillatum * Protists * Genome * Transcriptome * Proteome * Gene-family evolution * Lateral gene transfer * CAZymes * Feeding strategy * Geographical distribution * Ecological distribution
OECD category: Microbiology
Impact factor: 5.4, year: 2022
Method of publishing: Open access
https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-023-01563-9
Permanent Link: https://hdl.handle.net/11104/0344455 - 3.0558788 - BC 2023 RIV DE eng J - Journal Article
Tashyreva, Daria - Simpson, A.G.B. - Prokopchuk, Galina - Škodová-Sveráková, Ingrid - Butenko, Anzhelika - Hammond, Michael John - George, E.E. - Flegontova, Olga - Záhonová, Kristýna - Faktorová, Drahomíra - Yabuki, A. - Horák, Aleš - Keeling, P.J. - Lukeš, Julius
Diplonemids-A Review on New Flagellates on the Oceanic Block.
Protist. Roč. 173, č. 2 (2022), č. článku 125868. ISSN 1434-4610. E-ISSN 1618-0941
R&D Projects: GA ČR(CZ) GA18-23787S; GA MŠMT(CZ) LL1601; GA MŠMT(CZ) EF16_019/0000759; GA MŠMT(CZ) LM2018129
Grant - others:Gordon and Betty Moore Foundation(US) #9354
Program: Science
Institutional support: RVO:60077344
Keywords : ambulator larsen * phylogenetic position * microbial eukaryotes * euglena-gracilis * diversity * sea * patterson * protozoa * light * gene * Protists * taxonomic revision * ultrastructure * Euglenozoa * ecology * marine flagellates
OECD category: Ecology
Impact factor: 2.5, year: 2022
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S143446102200013X?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0340424 - 4.0557051 - BC 2023 RIV GB eng J - Journal Article
Prokopchuk, Galina - Korytář, Tomáš - Juricová, Valéria - Majstorović, Jovana - Horák, Aleš - Šimek, Karel - Lukeš, Julius
Trophic flexibility of marine diplonemids-switching from osmotrophy to bacterivory.
The ISME Journal. Roč. 16, č. 5 (2022), s. 1409-1419. ISSN 1751-7362. E-ISSN 1751-7370
R&D Projects: GA ČR(CZ) GA18-23787S; GA MŠMT(CZ) LL1601; GA MŠMT(CZ) EF16_019/0000759; GA MŠMT(CZ) EF16_025/0007417
Grant - others:Gordon and Betty Moore Foundation(US) #9354
Program: Science
Institutional support: RVO:60077344
Keywords : microbial food-web * fresh-water * ambulator larsen * protists * flagellate * phylogeny * diversity * predation * patterson * reservoir
OECD category: Marine biology, freshwater biology, limnology
Impact factor: 11, year: 2022
Method of publishing: Limited access
https://www.nature.com/articles/s41396-022-01192-0
Permanent Link: https://hdl.handle.net/11104/0340212 - 5.0548764 - BC 2022 RIV GB eng J - Journal Article
Škodová-Sveráková, Ingrid - Záhonová, Kristýna - Juricová, Valéria - Danchenko, M. - Moos, Martin - Baráth, P. - Prokopchuk, Galina - Butenko, Anzhelika - Lukáčová, V. - Kohútová, L. - Bučková, B. - Horák, Aleš - Faktorová, Drahomíra - Horváth, A. - Šimek, Petr - Lukeš, Julius
Highly flexible metabolism of the marine euglenozoan protist Diplonema papillatum.
BMC BIOLOGY. Roč. 19, č. 1 (2021), č. článku 251. E-ISSN 1741-7007
R&D Projects: GA ČR(CZ) GA18-23787S; GA ČR(CZ) GA17-22276S; GA ČR(CZ) GA18-15962S; GA MŠMT(CZ) LL1601; GA MŠMT(CZ) EF16_019/0000759
Grant - others:Gordon and Betty Moore Foundation(US) #9354
Program: Science
Institutional support: RVO:60077344
Keywords : Diplonema * metabolism * multiomics
OECD category: Microbiology
Impact factor: 7.364, year: 2021
Method of publishing: Open access
https://bmcbiol.biomedcentral.com/track/pdf/10.1186/s12915-021-01186-y.pdf
Permanent Link: http://hdl.handle.net/11104/0326650 - 6.0540624 - BC 2021 RIV DE eng J - Journal Article
Škodová-Sveráková, Ingrid - Prokopchuk, Galina - Peña-Diaz, Priscila - Záhonová, Kristýna - Moos, Martin - Horváth, A. - Šimek, Petr - Lukeš, Julius
Unique Dynamics of Paramylon Storage in the Marine Euglenozoan Diplonema papillatum.
Protist. Roč. 171, č. 2 (2020), č. článku 125717. ISSN 1434-4610. E-ISSN 1618-0941
R&D Projects: GA ČR(CZ) GA18-15962S; GA MŠMT(CZ) LL1601; GA MŠMT(CZ) EF16_019/0000759
Institutional support: RVO:60077344
Keywords : diplonemids * paramylon * paramylon synthase. * trehalose * β-1,3-glucan
OECD category: Microbiology
Impact factor: 2.566, year: 2020
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/pii/S1434461019300719?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0318245 - 7.0538265 - BC 2021 RIV GB eng J - Journal Article
Kaur, Binnypreet - Záhonová, Kristýna - Valach, M. - Faktorová, Drahomíra - Prokopchuk, Galina - Burger, G. - Lukeš, Julius
Gene fragmentation and RNA editing without borders: eccentric mitochondrial genomes of diplonemids.
Nucleic Acids Research. Roč. 48, č. 5 (2020), s. 2694-2708. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA MŠMT(CZ) LL1601; GA MŠMT(CZ) EF16_019/0000759
Grant - others:Gordon and Betty Moore Foundation(US) GBMF4983.01
Program: Science
Institutional support: RVO:60077344
Keywords : transcriptome * algorithm * evolution * alignment * reconstruction * generation * protists * platform * extreme * tool
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 16.971, year: 2020
Method of publishing: Open access
https://academic.oup.com/nar/article/48/5/2694/5699674
Permanent Link: http://hdl.handle.net/11104/0316093 - 8.0537398 - BC 2021 RIV GB eng J - Journal Article
George, E.E. - Husník, F. - Tashyreva, Daria - Prokopchuk, Galina - Horák, Aleš - Kwong, W.K. - Lukeš, Julius - Keeling, P.J.
Highly Reduced Genomes of Protist Endosymbionts Show Evolutionary Convergence.
Current Biology. Roč. 30, č. 5 (2020), s. 925-+. ISSN 0960-9822. E-ISSN 1879-0445
R&D Projects: GA MŠMT(CZ) LL1601; GA MŠMT(CZ) EF16_019/0000759; GA ČR(CZ) GA18-23787S
Institutional support: RVO:60077344
Keywords : host * symbiont * bacteria * sequence
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 10.834, year: 2020
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/abs/pii/S0960982219317038?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0315114 - 9.0520426 - BC 2020 RIV DE eng J - Journal Article
Prokopchuk, Galina - Tashyreva, Daria - Yabuki, A. - Horák, Aleš - Masařová, Petra - Lukeš, Julius
Morphological, Ultrastructural, Motility and Evolutionary Characterization of Two New Hemistasiidae Species.
Protist. Roč. 170, č. 3 (2019), s. 259-282. ISSN 1434-4610. E-ISSN 1618-0941
R&D Projects: GA ČR(CZ) GA16-18699S; GA ČR(CZ) GA18-23787S; GA MŠMT(CZ) LL1601; GA MŠMT(CZ) EF16_019/0000759; GA MŠMT(CZ) LM2015062; GA MŠMT(CZ) EF16_013/0001775
Institutional support: RVO:60077344
Keywords : diplonema-ambulator larsen * flagellates protista * sequence alignment * phylogeny * marine * patterson * redescription * euglenozoon * homologies * colorless * Diplonemids * Hemistasiidae * rickettsiid * endosymbiosis * extrusome
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 1.989, year: 2019
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/abs/pii/S1434461018301391?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0305102 - 10.0498832 - BC 2019 RIV DE eng J - Journal Article
Tashyreva, Daria - Prokopchuk, Galina - Yabuki, A. - Kaur, Binnypreet - Faktorová, Drahomíra - Votýpka, Jan - Kusaka, C. - Fujikura, K. - Shiratori, T. - Ishida, K. I. - Horák, Aleš - Lukeš, Julius
Phylogeny and Morphology of New Diplonemids from Japan.
Protist. Roč. 169, č. 2 (2018), s. 158-179. ISSN 1434-4610. E-ISSN 1618-0941
R&D Projects: GA MŠMT LL1601; GA ČR(CZ) GA14-23986S; GA MŠMT(CZ) LM2015062
Institutional support: RVO:60077344
Keywords : description * Diplonema * Euglenozoa * flagellates. * phylogeny * ultrastructure
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 3.000, year: 2018
Permanent Link: http://hdl.handle.net/11104/0291105