Search results
- 1.0587212 - MBÚ 2025 RIV US eng J - Journal Article
Tomasch, Jurgen - Kopejtka, Karel - Shivaramu, Sahana - Mujakić, Izabela - Koblížek, Michal
On the evolution of chromosomal regions with high gene strand bias in bacteria.
mBio. Roč. 15, č. 6 (2024), č. článku mbio.00602-24. ISSN 2161-2129. E-ISSN 2150-7511
R&D Projects: GA ČR(CZ) GX19-28778X
Institutional support: RVO:61388971
Keywords : replication * genome * organization * repeats * genome organization * genome evolution * gene order * strand bias * Gemmatimonadota
OECD category: Microbiology
Impact factor: 6.4, year: 2022
Method of publishing: Open access
https://journals.asm.org/doi/epub/10.1128/mbio.00602-24
Permanent Link: https://hdl.handle.net/11104/0354468 - 2.0585431 - MBÚ 2025 RIV US eng J - Journal Article
Tomasch, Jurgen - Kopejtka, Karel - Bílý, Tomáš - Gardiner, Alastair T. - Gardian, Zdenko - Shivaramu, Sahana - Koblížek, Michal - Kaftan, David
A photoheterotrophic bacterium from Iceland has adapted its photosynthetic machinery to the long days of polar summer.
mSystems. Roč. 9, č. 3 (2024), č. článku e0131123. ISSN 2379-5077. E-ISSN 2379-5077
R&D Projects: GA MŠMT(CZ) LM2018129; GA ČR(CZ) GX19-28778X; GA MŠMT(CZ) LM2023050; GA MŠMT(CZ) EF18_046/0016045
Research Infrastructure: Czech-BioImaging II - 90129
Institutional support: RVO:61388971 ; RVO:60077344
Keywords : aerobic anoxygenic phototrophs * light * database * carotenoids * stress * growth * oxygen * image * aap * gene expression * light adaptation * photosynthesis * Proteobacteria * Sediminicoccus
OECD category: Microbiology; Cell biology (BC-A)
Impact factor: 6.4, year: 2022
Method of publishing: Limited access
https://journals.asm.org/doi/10.1128/msystems.01311-23
Permanent Link: https://hdl.handle.net/11104/0353141 - 3.0572692 - MBÚ 2024 RIV NL eng J - Journal Article
Gardiner, Alastair T. - Mujakić, Izabela - Bína, David - Gardian, Zdenko - Kopejtka, Karel - Nupur, Nupur - Qian, P. - Koblížek, Michal
Characterisation of the photosynthetic complexes from the marine gammaproteobacterium Congregibacter litoralis KT71.
Biochimica Et Biophysica Acta-Bioenergetics. Roč. 1864, č. 2 (2023), č. článku 148946. ISSN 0005-2728. E-ISSN 1879-2650
R&D Projects: GA ČR(CZ) GX19-28778X; GA ČR(CZ) GA20-01159S
Institutional support: RVO:61388971 ; RVO:60077344
Keywords : aap * Congregibacter * Photoheterotrophy * Photosynthesis * Lightharvesting * Purple bacteria
OECD category: Microbiology; Microbiology (BC-A)
Impact factor: 4.3, year: 2022
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/pii/S0005272822004169?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0343301 - 4.0572376 - BC 2024 RIV US eng J - Journal Article
Munoz-Gomez, S.A. - Cadena, Lawrence Rudy - Gardiner, Alastair T. - Leger, M.M. - Sheikh, Shaghayegh - Connell, L.B. - Bílý, Tomáš - Kopejtka, Karel - Beatty, J.T. - Koblížek, Michal - Roger, A.J. - Slamovits, C.H. - Lukeš, Julius - Hashimi, Hassan
Intracytoplasmic-membrane development in alphaproteobacteria involves the homolog of the mitochondrial crista-developing protein Mic60.
Current Biology. Roč. 33, č. 6 (2023), s. 1099-+. ISSN 0960-9822. E-ISSN 1879-0445
R&D Projects: GA ČR(CZ) GA20-23513S; GA ČR(CZ) GX19-28778X; GA MŠMT(CZ) EF16_019/0000759; GA MŠMT(CZ) LM2015062
Institutional support: RVO:60077344 ; RVO:61388971
Keywords : Intracytoplasmic-membrane * mitochondrial * crista-developing protein Mic60
OECD category: Microbiology; Microbiology (MBU-M)
Impact factor: 9.2, year: 2022
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/abs/pii/S0960982223001999?via%3Dihub
Permanent Link: https://hdl.handle.net/11104/0343720 - 5.0571792 - MBÚ 2024 RIV CH eng J - Journal Article
Shivaramu, Sahana - Tomasch, Jurgen - Kopejtka, Karel - Nupur, Nupur - Saini, Mohit Kumar - Bokhari, Syed Nadeem Hussain - Küpper, Hendrik - Koblížek, Michal
The Influence of Calcium on the Growth, Morphology and Gene Regulation in Gemmatimonas phototrophica.
Microorganisms. Roč. 11, č. 1 (2023), č. článku 27. E-ISSN 2076-2607
R&D Projects: GA ČR(CZ) GX19-28778X; GA MŠMT EF15_003/0000336
Institutional support: RVO:61388971 ; RVO:60077344
Keywords : Gemmatimonas phototrophica * anoxygenic phototrophic bacteria * horizontal gene transfer * calcium * transcriptomics
OECD category: Microbiology; Microbiology (BC-A)
Impact factor: 4.5, year: 2022
Method of publishing: Open access
https://www.mdpi.com/2076-2607/11/1/27
Permanent Link: https://hdl.handle.net/11104/0342691 - 6.0565420 - MBÚ 2023 RIV US eng J - Journal Article
Kopejtka, Karel - Tomasch, Jurgen - Kaftan, David - Gardiner, Alastair T. - Bína, David - Gardian, Zdenko - Bellas, Ch. - Dröge, A. - Geffers, R. - Sommaruga, R. - Koblížek, Michal
A bacterium from a mountain lake harvests light using both proton-pumping xanthorhodopsins and bacteriochlorophyll-based photosystems.
Proceedings of the National Academy of Sciences of the United States of America. Roč. 119, č. 50 (2022), č. článku e2211018119. ISSN 0027-8424. E-ISSN 1091-6490
R&D Projects: GA ČR(CZ) GX19-28778X; GA MŠMT(CZ) EF18_053/0017705; GA MŠMT(CZ) LM2018129
Institutional support: RVO:61388971 ; RVO:60077344
Keywords : anoxygenic photosynthesis * bacteriochlorophyll a * dual phototrophy * light energy * xanthorhodopsin
OECD category: Microbiology; Cell biology (BC-A)
Impact factor: 11.1, year: 2022
Method of publishing: Limited access
https://www.pnas.org/doi/10.1073/pnas.2211018119
Permanent Link: https://hdl.handle.net/11104/0336944 - 7.0550102 - MBÚ 2022 RIV GB eng J - Journal Article
Koblížek, Michal - Hávová, Daniela - Kopejtka, Karel - Tomasch, Jurgen - Bišová, Kateřina
Distribution of cycle threshold values in RT-qPCR tests during the autumn 2020 peak of the COVID-19 pandemic in the Czech Republic.
Access Microbiology. Roč. 3, č. 9 (2021), č. článku 000263. E-ISSN 2516-8290
Institutional support: RVO:61388971
Keywords : COVID-19 * cycle threshold * RT-qPCR testing * SARS-CoV-2
OECD category: Microbiology
Method of publishing: Open access
https://www.microbiologyresearch.org/content/journal/acmi/10.1099/acmi.0.000263?crawler=true
Permanent Link: http://hdl.handle.net/11104/0325952 - 8.0542935 - MBÚ 2022 RIV CH eng J - Journal Article
Kopejtka, Karel - Zeng, Yonghui - Kaftan, David - Selyanin, Vadim - Gardian, Zdenko - Tomasch, J. - Sommaruga, R. - Koblížek, Michal
Characterization of the Aerobic Anoxygenic Phototrophic Bacterium Sphingomonas sp. AAP5.
Microorganisms. Roč. 9, č. 4 (2021), č. článku 768. E-ISSN 2076-2607
R&D Projects: GA ČR(CZ) GJ18-14095Y
Institutional support: RVO:61388971 ; RVO:60077344
Keywords : aerobic anoxygenic phototrophic bacteria * bacteriochlorophyll a * photosynthesis genes * rhodopsin * Sphingomonadaceae
OECD category: Microbiology; Microbiology (BC-A)
Impact factor: 4.926, year: 2021
Method of publishing: Open access
https://www.mdpi.com/2076-2607/9/4/768
Permanent Link: http://hdl.handle.net/11104/0320259 - 9.0536958 - MBÚ 2021 RIV GB eng J - Journal Article
Kopejtka, Karel - Tomasch, J. - Zeng, Yonghui - Selyanin, Vadim - Dachev, Marko - Piwosz, Kasia - Tichý, Martin - Bína, David - Gardian, Zdenko - Bunk, B. - Brinkmann, H. - Geffers, R. - Sommaruga, R. - Koblížek, Michal
Simultaneous presence of bacteriochlorophyll and xanthorhodopsin genes in a freshwater bacterium.
mSystems. Roč. 5, č. 6 (2020), č. článku e01044-20. ISSN 2379-5077. E-ISSN 2379-5077
R&D Projects: GA ČR(CZ) GJ18-14095Y
Institutional support: RVO:61388971 ; RVO:60077344
Keywords : Aerobic anoxygenic phototrophic bacteria * Bacteriochlorophyll * Gene expression * Photosynthesis gene cluster * Rhodopsin
OECD category: Microbiology; Biochemistry and molecular biology (BC-A)
Impact factor: 6.496, year: 2020
Method of publishing: Open access
https://msystems.asm.org/content/5/6/e01044-20
Permanent Link: http://hdl.handle.net/11104/0314709 - 10.0508671 - MBÚ 2020 RIV GB eng J - Journal Article
Kopejtka, Karel - Lin, Y. - Jakubovičová, M. - Koblížek, Michal - Tomasch, J.
Clustered Core- and Pan-Genome Content on Rhodobacteraceae Chromosomes.
Genome Biology and Evolution. Roč. 11, č. 8 (2019), s. 2208-2217. ISSN 1759-6653. E-ISSN 1759-6653
R&D Projects: GA MŠMT(CZ) LO1416
Institutional support: RVO:61388971
Keywords : genome architecture * genome evolution * origin of replication
OECD category: Microbiology
Impact factor: 3.462, year: 2019
Method of publishing: Open access
https://academic.oup.com/gbe/article/11/8/2208/5527758
Permanent Link: http://hdl.handle.net/11104/0299509