Search results
- 1.0543807 - MBÚ 2022 RIV GB eng J - Journal Article
Filandrová, Růžena - Vališ, Karel - Černý, Jiří - Chmelík, Josef - Slavata, Lukáš - Fiala, Jan - Rosůlek, Michal - Kavan, Daniel - Man, Petr - Chum, Tomáš - Cebecauer, Marek - Fabris, D. - Novák, Petr
Motif orientation matters: Structural characterization of TEAD1 recognition of genomic DNA.
Structure. Roč. 29, č. 4 (2021), s. 345-356. ISSN 0969-2126. E-ISSN 1878-4186
R&D Projects: GA ČR(CZ) GA16-24309S; GA MŠMT(CZ) LH15010; GA MŠMT(CZ) LQ1604; GA MŠMT(CZ) LO1509; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) LM2015043
EU Projects: European Commission(XE) 823839 - EPIC-XS
Research Infrastructure: CIISB - 90043
Institutional support: RVO:61388971 ; RVO:86652036 ; RVO:61388955
Keywords : TEAD1 * genomic DNA * M-CAT motifs * ChIP-qPCR * presence of M-CAT
OECD category: Biochemistry and molecular biology; Biophysics (BTO-N); Physical chemistry (UFCH-W)
Impact factor: 5.871, year: 2021
Method of publishing: Limited access
https://www.sciencedirect.com/science/article/abs/pii/S0969212620304652?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0320930File Download Size Commentary Version Access 0543807preprint.pdf 5 2.2 MB Author´s preprint open-access - 2.0542387 - MBÚ 2022 RIV US eng J - Journal Article
Kukačka, Zdeněk - Rosůlek, Michal - Jelínek, Jan - Slavata, Lukáš - Kavan, Daniel - Novák, Petr
LinX: A Software Tool for Uncommon Cross-Linking Chemistry.
Journal of Proteome Research. Roč. 20, č. 4 (2021), s. 2021-2027. ISSN 1535-3893. E-ISSN 1535-3907
R&D Projects: GA ČR(CZ) GA19-16084S; GA MŠMT(CZ) LH15010; GA MŠMT(CZ) LQ1604; GA MŠMT(CZ) LD15089; GA MŠMT(CZ) ED1.1.00/02.0109
EU Projects: European Commission(XE) 731077 - EU_FT-ICR_MS
Institutional support: RVO:61388971
Keywords : mass spectrometry * high resolution * chemical cross-linking * proteins
OECD category: Biochemistry and molecular biology
Impact factor: 5.370, year: 2021
Method of publishing: Open access
https://pubs.acs.org/doi/10.1021/acs.jproteome.0c00858
Permanent Link: http://hdl.handle.net/11104/0319810 - 3.0519095 - MBÚ 2020 RIV CH eng J - Journal Article
Slavata, Lukáš - Chmelík, Josef - Kavan, Daniel - Filandrová, Růžena - Fiala, Jan - Rosůlek, Michal - Mrázek, Hynek - Kukačka, Zdeněk - Vališ, Karel - Man, Petr - Miller, M. - McIntyre, W. - Fabris, D. - Novák, Petr
MS-Based Approaches Enable the Structural Characterization of Transcription Factor/DNA Response Element Complex.
Biomolecules. Roč. 9, č. 10 (2019), č. článku 535. E-ISSN 2218-273X
R&D Projects: GA ČR(CZ) GA16-24309S; GA MŠMT(CZ) LH15010; GA MŠMT(CZ) LQ1604; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) LO1509
EU Projects: European Commission(XE) 731077 - EU_FT-ICR_MS; European Commission(XE) 823839 - EPIC-XS; European Commission(CZ) FP7WeNMR-261572; European Commission(CZ) H2020 West-Life 675858
Institutional support: RVO:61388971
Keywords : transcription factor * protein * protein-nucleic acid cross-linking
OECD category: Biochemistry and molecular biology
Impact factor: 4.082, year: 2019
Method of publishing: Open access
https://www.mdpi.com/2218-273X/9/10/535
Permanent Link: http://hdl.handle.net/11104/0304158File Download Size Commentary Version Access 163_MS-Based Approaches Enable the Structural Characterization.pdf 5 4 MB Publisher’s postprint require - 4.0518684 - MBÚ 2020 RIV CH eng J - Journal Article
Rosůlek, Michal - Darebná, Petra - Pompach, Petr - Slavata, Lukáš - Novák, Petr
Proteases Immobilization for In Situ Time-Limited Proteolysis on MALDI Chips.
Catalysts. Roč. 9, č. 10 (2019), č. článku 833. E-ISSN 2073-4344
R&D Projects: GA ČR(CZ) GA16-24309S; GA MŠMT(CZ) LH15010; GA MŠMT(CZ) LQ1604; GA MŠMT(CZ) ED1.1.00/02.0109
EU Projects: European Commission(XE) 823839 - EPIC-XS
Institutional support: RVO:61388971
Keywords : protease * enzyme * ambient ion landing
OECD category: Biochemistry and molecular biology
Impact factor: 3.520, year: 2019
Method of publishing: Open access
https://www.mdpi.com/2073-4344/9/10/833
Permanent Link: http://hdl.handle.net/11104/0303757 - 5.0505686 - MBÚ 2020 RIV CH eng J - Journal Article
Adámková, Ljubina - Kvíčalová, Zuzana - Rozbeský, Daniel - Kukačka, Zdeněk - Adámek, David - Cebecauer, Marek - Novák, Petr
Oligomeric Architecture of Mouse Activating Nkrp1 Receptors on Living Cells.
International Journal of Molecular Sciences. Roč. 20, č. 8 (2019), č. článku 1884. E-ISSN 1422-0067
R&D Projects: GA ČR(CZ) GA16-24309S; GA MŠMT(CZ) LH15010; GA MŠMT(CZ) LD15089; GA MŠMT(CZ) LQ1604; GA MŠMT(CZ) ED1.1.00/02.0109
Research Infrastructure: CIISB - 90043
Institutional support: RVO:61388971 ; RVO:61388955
Keywords : Nkrp1 * dimerization * Forster resonance energy transfer
OECD category: Biochemistry and molecular biology; Physical chemistry (UFCH-W)
Impact factor: 4.556, year: 2019
Method of publishing: Open access
https://www.mdpi.com/1422-0067/20/8/1884
Permanent Link: http://hdl.handle.net/11104/0297120File Download Size Commentary Version Access 0505686.pdf 2 3 MB open access Publisher’s postprint open-access - 6.0496286 - MBÚ 2019 RIV US eng J - Journal Article
Darebná, Petra - Špička, J. - Kučera, R. - Topolčan, O. - Navrátilová, E. - Růžička, V. - Volný, Michael - Novák, Petr - Pompach, Petr
Detection and Quantification of Carbohydrate-Deficient Transferrin by MALDI-Compatible Protein Chips Prepared by Ambient Ion Soft Landing.
Clinical Chemistry. Roč. 64, č. 9 (2018), s. 1319-1326. ISSN 0009-9147. E-ISSN 1530-8561
R&D Projects: GA MŠMT(CZ) LM2015043; GA MŠMT(CZ) LH15010; GA MŠMT(CZ) LD15089; GA MŠMT(CZ) LQ1604; GA MŠMT(CZ) ED1.1.00/02.0109
Institutional support: RVO:61388971
Keywords : MASS-SPECTROMETRY * ALCOHOL-CONSUMPTION * SERUM TRANSFERRIN
OECD category: Biochemistry and molecular biology
Impact factor: 6.916, year: 2018
Permanent Link: http://hdl.handle.net/11104/0289108File Download Size Commentary Version Access 163_Detection and Quantification of Carbohydrate-Deficient.pdf 6 1.9 MB Publisher’s postprint require - 7.0491223 - ÚMG 2019 RIV GB eng J - Journal Article
Škerlová, Jana - Bláha, J. - Pachl, Petr - Hofbauerová, Kateřina - Kukačka, Zdeněk - Man, Petr - Pompach, Petr - Novák, Petr - Otwinowski, Z. - Brynda, Jiří - Vaněk, O. - Řezáčová, Pavlína
Crystal structure of native beta-N-acetylhexosaminidase isolated from Aspergillus oryzae sheds light onto its substrate specificity, high stability, and regulation by propeptide.
FEBS Journal. Roč. 285, č. 3 (2018), s. 580-598. ISSN 1742-464X. E-ISSN 1742-4658
R&D Projects: GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) LO1304; GA MŠMT(CZ) LO1509; GA MŠMT(CZ) LQ1604; GA MŠMT LG14009; GA MŠMT(CZ) LH15010; GA MŠMT(CZ) LM2015043; GA MŠMT(CZ) LD15089; GA ČR(CZ) GA15-05677S; GA ČR(CZ) GA16-24309S; GA ČR(CZ) GA15-15181S
Institutional support: RVO:68378050 ; RVO:61388971
Keywords : active pocket * carbohydrate biotechnology * glycosylation * mass spectrometry * propeptide * X-ray crystallography
OECD category: Biochemistry and molecular biology; Biochemistry and molecular biology (MBU-M)
Impact factor: 4.739, year: 2018
Permanent Link: http://hdl.handle.net/11104/0285263 - 8.0489608 - MBÚ 2019 RIV US eng J - Journal Article
Rozbeský, Daniel - Rosůlek, Michal - Kukačka, Zdeněk - Chmelík, Josef - Man, Petr - Novák, Petr
Impact of Chemical Cross-Linking on Protein Structure and Function.
Analytical Chemistry. Roč. 90, č. 2 (2018), s. 1104-1113. ISSN 0003-2700. E-ISSN 1520-6882
R&D Projects: GA ČR(CZ) GA16-24309S; GA MŠMT(CZ) LH15010; GA MŠMT(CZ) LD15089; GA MŠMT(CZ) LO1509; GA MŠMT(CZ) LQ1604; GA MŠMT(CZ) LM2015043; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) BM1403
EU Projects: European Commission(CZ) BM1403
Institutional support: RVO:61388971
Keywords : TRANSFORM MASS-SPECTROMETRY * DISTANCE GEOMETRY METHOD * TOP-DOWN APPROACH
OECD category: Biochemistry and molecular biology
Impact factor: 6.350, year: 2018
Permanent Link: http://hdl.handle.net/11104/0284071File Download Size Commentary Version Access 163_Impact of Chemical Cross-Linking on Protein.pdf 3 5.5 MB Publisher’s postprint require - 9.0466791 - MBÚ 2017 RIV US eng J - Journal Article
Pompach, Petr - Benada, Oldřich - Rosulek, Michal - Darebna, Petra - Hausner, Jiří - Růžička, V. - Volný, Michael - Novák, Petr
Protein Chips Compatible with MALDI Mass Spectrometry Prepared by Ambient Ion Landing.
Analytical Chemistry. Roč. 88, č. 17 (2016), s. 8526-8534. ISSN 0003-2700. E-ISSN 1520-6882
R&D Projects: GA MŠMT(CZ) LH15010; GA MŠMT(CZ) LD15089; GA MŠMT(CZ) LQ1604; GA MŠMT(CZ) LO1509; GA MŠMT(CZ) ED1.1.00/02.0109; GA ČR(CZ) GA16-24309S
Institutional support: RVO:61388971
Keywords : ASSEMBLED MONOLAYER SURFACES * TREATED METAL-SURFACE * IN-SITU ENRICHMENT
Subject RIV: EE - Microbiology, Virology
Impact factor: 6.320, year: 2016
Permanent Link: http://hdl.handle.net/11104/0265366File Download Size Commentary Version Access 163_Protein Chips Compatible with MALDI Mass.pdf 5 4.1 MB Publisher’s postprint require