Search results
- 1.0583244 - FGÚ 2025 RIV CH eng J - Journal Article
Kysilov, Bohdan - Kuchtiak, Viktor - Hrčka Krausová, Barbora - Balík, Aleš - Kořínek, Miloslav - Fili, Klevinda - Dobrovolski, Mark - Abramová, Vera - Chodounská, Hana - Kudová, Eva - Božíková, Paulina - Černý, Jiří - Smejkalová, Tereza - Vyklický ml., Ladislav
Disease-associated nonsense and frame-shift variants resulting in the truncation of the GluN2A or GluN2B C-terminal domain decrease NMDAR surface expression and reduce potentiating effects of neurosteroids.
Cellular and Molecular Life Sciences. Roč. 81, č. 1 (2024), č. článku 36. ISSN 1420-682X. E-ISSN 1420-9071
R&D Projects: GA ČR(CZ) GA23-04922S; GA TA ČR(CZ) TN02000109; GA MZd(CZ) EF16_025/0007444
Institutional support: RVO:67985823 ; RVO:61388963 ; RVO:86652036
Keywords : glutamate receptors * channelopathy * endogenous neuroactive steroid * GRIN2 genes * surface expression * rescue pharmacology
OECD category: Neurosciences (including psychophysiology
Impact factor: 8, year: 2022
Method of publishing: Open access
https://doi.org/10.1007/s00018-023-05062-6
Permanent Link: https://hdl.handle.net/11104/0351253 - 2.0574533 - BTÚ 2024 RIV US eng J - Journal Article
Malý, Martin - Kolenko, Petr - Stránský, Jan - Švecová, Leona - Dušková, Jarmila - Koval, Tomáš - Skálová, Tereza - Trundová, Mária - Adámková, Kristýna - Černý, Jiří - Božíková, Paulina - Dohnálek, Jan
Tetracycline-modifying enzyme SmTetX from Stenotrophomonas maltophilia.
Acta Crystallographica Section F-Structural Biology and Crystallization Communications. Roč. 79, JUL 2023 (2023), s. 180-192. ISSN 1744-3091. E-ISSN 2053-230X
R&D Projects: GA MŠMT EF16_019/0000778; GA MŠMT EF15_003/0000447; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) EF18_046/0015974
Research Infrastructure: CIISB III - 90242
Institutional support: RVO:86652036
Keywords : FAD-dependent monooxygenases * tetracycline * antibiotic resistance
OECD category: Biochemistry and molecular biology
Impact factor: 0.9, year: 2022
Method of publishing: Open access
https://scripts.iucr.org/cgi-bin/paper?S2053230X23005381
Permanent Link: https://hdl.handle.net/11104/0346203 - 3.0572804 - FGÚ 2024 RIV US eng J - Journal Article
Abramová, Vera - Leal Alvarado, Vanessa - Hill, M. - Smejkalová, Tereza - Malý, Michal - Valeš, Karel - Dittert, Ivan - Božíková, Paulina - Kysilov, Bohdan - Hrčka Krausová, Barbora - Vyklický, Vojtěch - Balík, Aleš - Fili, Klevinda - Kořínek, Miloslav - Chodounská, Hana - Kudová, Eva - Číž, D. - Martinovič, J. - Černý, Jiří - Bartůněk, Petr - Vyklický ml., Ladislav
Effects of Pregnanolone Glutamate and Its Metabolites on GABAA and NMDA Receptors and Zebrafish Behavior.
ACS Chemical Neuroscience. Roč. 14, č. 10 (2023), s. 1870-1883. ISSN 1948-7193. E-ISSN 1948-7193
R&D Projects: GA MZd(CZ) EF16_025/0007444; GA MŠMT LM2023052; GA ČR(CZ) GA23-04922S; GA TA ČR(CZ) TN02000109
Research Infrastructure: CZ-OPENSCREEN IV - 90252
Institutional support: RVO:67985823 ; RVO:86652036 ; RVO:61388963 ; RVO:68378050
Keywords : negative allosteric modulator * thigmotaxis * steroid * glutamate * zebrafish
OECD category: Neurosciences (including psychophysiology; Neurosciences (including psychophysiology (UOCHB-X); Biochemistry and molecular biology (UMG-J); Biochemistry and molecular biology (BTO-N)
Impact factor: 5, year: 2022
Method of publishing: Limited access
https://doi.org/10.1021/acschemneuro.3c00131
Permanent Link: https://hdl.handle.net/11104/0343402 - 4.0554797 - BTÚ 2022 RIV CH eng J - Journal Article
Hirschfeldova, K. - Černý, Jiří - Božíková, Paulina - Kuchtiak, V. - Rausch, T. - Benes, V. - Španiel, F. - Greguš, D. - Horáček, J. - Vyklický, L. - Balik, A.
Evidence for the Association between the Intronic Haplotypes of Ionotropic Glutamate Receptors and First-Episode Schizophrenia.
Journal of Personalized Medicine. Roč. 11, č. 12 (2021), č. článku 1250. E-ISSN 2075-4426
Institutional support: RVO:86652036
Keywords : polygenic risk score * subunit gene grin1 * synaptic plasticity * population-structure
OECD category: Substance abuse
Impact factor: 3.508, year: 2021
Method of publishing: Open access
https://www.mdpi.com/2075-4426/11/12/1250
Permanent Link: http://hdl.handle.net/11104/0329540 - 5.0535408 - BTÚ 2021 RIV GB eng J - Journal Article
Černý, Jiří - Božíková, Paulina - Malý, Michal - Tykač, Michal - Biedermannová, Lada - Schneider, Bohdan
Structural alphabets for conformational analysis of nucleic acids available at dnatco.datmos.org.
Acta Crystallographica Section D-Structural Biology. Roč. 76, SEP 1 2020 (2020), s. 805-813. ISSN 2059-7983. E-ISSN 2059-7983
R&D Projects: GA MŠMT(CZ) LM2018131; GA MŠMT(CZ) LTAUSA18197; GA MŠMT(CZ) ED1.1.00/02.0109
Institutional support: RVO:86652036
Keywords : secondary structure * rna * nomenclature * recognition * refinement
OECD category: Biochemical research methods
Impact factor: 7.652, year: 2020
Method of publishing: Open access
https://journals.iucr.org/d/issues/2020/09/00/ir5007/ir5007.pdf
Permanent Link: http://hdl.handle.net/11104/0313442 - 6.0535402 - BTÚ 2021 RIV GB eng J - Journal Article
Černý, Jiří - Božíková, Paulina - Svoboda, Jakub - Schneider, Bohdan
A unified dinucleotide alphabet describing both RNA and DNA structures.
Nucleic Acids Research. Roč. 48, č. 11 (2020), s. 6367-6381. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA MŠMT(CZ) LTAUSA18197; GA MŠMT(CZ) LM2018131; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) EF16_013/0001777
Institutional support: RVO:86652036
Keywords : resolution structure * angstrom resolution * secondary structure * crystal-structure * building-blocks
OECD category: Biochemistry and molecular biology
Impact factor: 16.971, year: 2020
Method of publishing: Open access
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7293047/
Permanent Link: http://hdl.handle.net/11104/0313444 - 7.0517484 - BTÚ 2020 RIV CH eng J - Journal Article
Černý, Jiří - Božíková, Paulina - Balik, A. - Marques, S. M. - Vyklický, L.
NMDA Receptor Opening and Closing-Transitions of a Molecular Machine Revealed by Molecular Dynamics.
Biomolecules. Roč. 9, č. 10 (2019), č. článku 546. E-ISSN 2218-273X
R&D Projects: GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) LM2015047
Institutional support: RVO:86652036
Keywords : LIGAND-BINDING DOMAINS * glutamate receptor gating * molecular modeling
OECD category: Biochemistry and molecular biology
Impact factor: 4.082, year: 2019
Method of publishing: Open access
https://www.mdpi.com/2218-273X/9/10/546
Permanent Link: http://hdl.handle.net/11104/0302818 - 8.0499565 - BTÚ 2019 RIV GB eng J - Journal Article
Schneider, Bohdan - Božíková, Paulina - Nečasová, Iva - Čech, P. - Svozil, D. - Černý, Jiří
A DNA structural alphabet provides new insight into DNA flexibility.
Acta Crystallographica Section D-Structural Biology. Roč. 74, JAN 2018 (2018), s. 52-64. ISSN 2059-7983. E-ISSN 2059-7983
R&D Projects: GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) LM2015047
Grant - others:GA MŠk(CZ) EF16_013/0001777
Program: EF - Operační program výzkum, vývoj, vzdělávání (2014 - 2020)
Institutional support: RVO:86652036
Keywords : DNA structure * X-ray structure * NMR structure
OECD category: Biochemistry and molecular biology
Impact factor: 3.227, year: 2018
Permanent Link: http://hdl.handle.net/11104/0291765 - 9.0484505 - BTÚ 2018 RIV CH eng J - Journal Article
Schneider, Bohdan - Božíková, Paulina - Čech, P. - Svozil, D. - Černý, Jiří
A DNA Structural Alphabet Distinguishes Structural Features of DNA Bound to Regulatory Proteins and in the Nucleosome Core Particle.
Genes. Roč. 8, č. 10 (2017), č. článku 278. E-ISSN 2073-4425
R&D Projects: GA MŠMT(CZ) ED1.1.00/02.0109
Grant - others:GA MŠk(CZ) EF16_013/0001777
Program: EF - Operační program výzkum, vývoj, vzdělávání (2014 - 2020)
Institutional support: RVO:86652036
Keywords : DNA * DNA-protein recognition * transcription factors
OECD category: Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)
Impact factor: 3.191, year: 2017
Permanent Link: http://hdl.handle.net/11104/0281849 - 10.0465942 - BTÚ 2017 RIV GB eng J - Journal Article
Černý, Jiří - Božíková, Paulina - Schneider, Bohdan
DNATCO: assignment of DNA conformers at dnatco.org.
Nucleic Acids Research. Roč. 44, č. W1 (2016), W284-W287. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA MŠMT(CZ) LM2015047; GA MŠMT(CZ) ED1.1.00/02.0109
Institutional support: RVO:86652036
Keywords : conformations
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 10.162, year: 2016
Permanent Link: http://hdl.handle.net/11104/0264406