Search results
- 1.0574534 - BTÚ 2024 RIV CH eng J - Journal Article
Pham, Phuong Ngoc - Zahradník, J. - Kolářová, Lucie - Schneider, Bohdan - Fuertes, Gustavo
Regulation of IL-24/IL-20R2 complex formation using photocaged tyrosines and UV light.
Frontiers in molecular biosciences. Roč. 10, JUL 7 2023 (2023), č. článku 1214235. E-ISSN 2296-889X
R&D Projects: GA MŠMT LM2023042; GA MŠMT EF15_003/0000447; GA MŠMT(CZ) EF18_046/0015974; GA MŠMT LX22NPO5102
Institutional support: RVO:86652036
Keywords : protein-protein interactions (PPI) * interleukin-24 * cytokines * optobinders * genetically encoded non-canonical amino acids (ncAA) * photocaged proteins
OECD category: Biochemistry and molecular biology
Impact factor: 5, year: 2022
Method of publishing: Open access
https://www.frontiersin.org/articles/10.3389/fmolb.2023.1214235/full
Permanent Link: https://hdl.handle.net/11104/0345655 - 2.0569019 - BTÚ 2024 RIV GB eng J - Journal Article
Huličiak, Maroš - Biedermannová, Lada - Berdár, Daniel - Herynek, Štěpán - Kolářová, Lucie - Tomala, Jakub - Mikulecký, Pavel - Schneider, Bohdan
Combined in vitro and cell-based selection display method producing specific binders against IL-9 receptor in high yields.
FEBS Journal. Roč. 290, č. 11 (2023), s. 2993-3005. ISSN 1742-464X. E-ISSN 1742-4658
R&D Projects: GA MŠMT LX22NPO5102; GA MŠMT(CZ) LM2018127; GA MŠMT(CZ) EF18_046/0015974; GA ČR(CZ) GA20-13029S
Institutional support: RVO:86652036
Keywords : directed evolution * interleukin 9 receptor alpha * protein scaffolds * ribosome display * yeast display
OECD category: Biochemistry and molecular biology
Impact factor: 5.4, year: 2022
Method of publishing: Open access
https://febs.onlinelibrary.wiley.com/doi/10.1111/febs.16726
Permanent Link: https://hdl.handle.net/11104/0340309 - 3.0556045 - BTÚ 2023 RIV US eng J - Journal Article
Zahradnik, J. - Dey, D. - Marciano, S. - Kolářová, Lucie - Charendoff, C. - Subtil, A. - Schreiber, G.
A Protein-Engineered, Enhanced Yeast Display Platform for Rapid Evolution of Challenging Targets.
ACS Synthetic Biology. Roč. 10, č. 12 (2021), s. 3445-3460. ISSN 2161-5063
Institutional support: RVO:86652036
Keywords : green fluorescent protein * surface display * saccharomyces-cerevisiae * directed evolution * rf cloning
OECD category: Biochemical research methods
Impact factor: 5.249, year: 2021
Method of publishing: Open access
https://pubs.acs.org/doi/10.1021/acssynbio.1c00395
Permanent Link: https://hdl.handle.net/11104/0334150 - 4.0550560 - BTÚ 2022 RIV GB eng J - Journal Article
Kolářová, Lucie - Zahradnik, J. - Huličiak, Maroš - Mikulecký, Pavel - Peleg, Y. - Shemesh, M. - Schreiber, G. - Schneider, Bohdan
De novo developed protein binders mimicking Interferon lambda signaling.
FEBS Journal. DEC 2021, 2021-12-11 (2021). ISSN 1742-464X. E-ISSN 1742-4658
R&D Projects: GA ČR(CZ) GA19-17398S; GA MŠMT(CZ) LM2018127
Institutional support: RVO:86652036
Keywords : crystal-structure * escherichia-coli * structural basis * receptor * affinity * scaffold * complex * therapeutics * expression
OECD category: Biochemistry and molecular biology
Impact factor: 5.622, year: 2021
Method of publishing: Limited access
https://febs.onlinelibrary.wiley.com/doi/10.1111/febs.16300
Permanent Link: http://hdl.handle.net/11104/0328976 - 5.0542184 - BTÚ 2022 RIV CH eng J - Journal Article
Pham, Phuong Ngoc - Huličiak, Maroš - Biedermannová, Lada - Černý, Jiří - Charnavets, Tatsiana - Fuertes, Gustavo - Herynek, Štěpán - Kolářová, Lucie - Kolenko, Petr - Pavlíček, Jiří - Zahradník, Jiří - Mikulecký, Pavel - Schneider, Bohdan
Protein Binder (ProBi) as a New Class of Structurally Robust Non-Antibody Protein Scaffold for Directed Evolution.
Viruses. Roč. 13, č. 2 (2021), č. článku 190. E-ISSN 1999-4915
R&D Projects: GA ČR(CZ) GA16-20507S; GA MŠMT(CZ) LM2015043; GA MŠMT(CZ) LM2018127
Institutional support: RVO:86652036
Keywords : directed evolution * protein scaffold * protein engineering * computational saturation * ribosome display * interleukin-10
OECD category: Virology
Impact factor: 5.818, year: 2021
Method of publishing: Open access
https://www.mdpi.com/1999-4915/13/2/190
Permanent Link: http://hdl.handle.net/11104/0319662 - 6.0521414 - BTÚ 2020 RIV GB eng J - Journal Article
Zahradník, Jiří - Kolářová, Lucie - Peleg, Y. - Kolenko, Petr - Svidenská, S. - Charnavets, Tatsiana - Unger, T. - Sussman, J. L. - Schneider, Bohdan
Flexible regions govern promiscuous binding of IL-24 to receptors IL-20R1 and IL-22R1.
FEBS Journal. Roč. 286, č. 19 (2019), s. 3858-3873. ISSN 1742-464X. E-ISSN 1742-4658
R&D Projects: GA ČR(CZ) GA16-20507S; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) LM2015043; GA MŠMT(CZ) EF16_013/0001777
Institutional support: RVO:86652036
Keywords : differentiation-associated gene * human-melanoma differentiation * transfer-pcr tpcr * crystal-structure * human interleukin-24
OECD category: Biochemistry and molecular biology
Impact factor: 4.392, year: 2019
Method of publishing: Open access
https://febs.onlinelibrary.wiley.com/doi/full/10.1111/febs.14945
Permanent Link: http://hdl.handle.net/11104/0306043 - 7.0499369 - BTÚ 2019 RIV US eng J - Journal Article
Zahradník, Jiří - Kolenko, Petr - Palyzova, A. - Černý, Jiří - Kolářová, Lucie - Kyslikova, E. - Maresova, H. - Grulich, M. - Nunvář, Jaroslav - Sulc, M. - Kyslik, P. - Schneider, Bohdan
The crystal structure of XdpB, the bacterial old yellow enzyme, in an FMN-free form.
PLoS ONE. Roč. 13, č. 4 (2018), č. článku e0195299. ISSN 1932-6203. E-ISSN 1932-6203
Institutional support: RVO:86652036
Keywords : GLYCEROL TRINITRATE REDUCTASE * N-ETHYLMALEIMIDE REDUCTASE * OXIDATIVE STRESS-RESPONSE
OECD category: Biochemistry and molecular biology
Impact factor: 2.776, year: 2018
Permanent Link: http://hdl.handle.net/11104/0291589 - 8.0498869 - BTÚ 2019 RIV GB eng J - Journal Article
Zahradník, Jiří - Kolářová, Lucie - Pařízková, Hana - Kolenko, Petr - Schneider, Bohdan
Interferons type II and their receptors R1 and R2 in fish species: Evolution, structure, and function.
Fish & Shellfish Immunology. Roč. 79, AUG 2018 (2018), s. 140-152. ISSN 1050-4648. E-ISSN 1095-9947
R&D Projects: GA ČR(CZ) GA16-20507S; GA MŠMT(CZ) LM2015043; GA MŠMT(CZ) EF16_013/0001776; GA MŠMT(CZ) ED1.1.00/02.0109
Institutional support: RVO:86652036
Keywords : Interferon gamma * Type II interferons * Jak-Stat pathway
OECD category: Technologies involving identifying the functioning of DNA, proteins and enzymes and how they influence the onset of disease and maintenance of well-being (gene-based diagnostics and therapeutic interventions (pharmacogenomics, gene-based therapeutics)
Impact factor: 3.298, year: 2018
Permanent Link: http://hdl.handle.net/11104/0291180 - 9.0491932 - BTÚ 2019 RIV DE eng J - Journal Article
Zahradník, Jiří - Nunvář, J. - Pařízková, Hana - Kolářová, Lucie - Palyzová, A. - Marešová, H. - Grulich, M. - Kyslíková, E. - Kyslík, P.
Agrobacterium bohemicum sp nov isolated from poppy seed wastes in central Bohemia.
Systematic and Applied Microbiology. Roč. 41, č. 3 (2018), s. 184-190. ISSN 0723-2020. E-ISSN 1618-0984
R&D Projects: GA MŠMT(CZ) ED2.1.00/19.0390
Institutional support: RVO:86652036
Keywords : Agrobacterium * Taxonomy * Papaver somniferum
OECD category: Biochemistry and molecular biology
Impact factor: 2.808, year: 2018
Permanent Link: http://hdl.handle.net/11104/0285534 - 10.0465935 - BTÚ 2017 RIV GB eng J - Journal Article
Mikulecký, Pavel - Zahradník, Jiří - Kolenko, Petr - Černý, Jiří - Charnavets, Tatsiana - Kolářová, Lucie - Nečasová, Iva - Pham, Phuong Ngoc - Schneider, Bohdan
Crystal structure of human interferon-gamma receptor 2 reveals the structural basis for receptor specificity.
Acta Crystallographica Section D-Structural Biology. Roč. 72, č. 9 (2016), s. 1017-1025. ISSN 2059-7983. E-ISSN 2059-7983
R&D Projects: GA ČR(CZ) GA16-20507S; GA MŠMT(CZ) ED1.1.00/02.0109
Institutional support: RVO:86652036
Keywords : interferon-gamma receptor 2 * fibronectin type III domain * class 2 cytokine receptors
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 2.114, year: 2016
Permanent Link: http://hdl.handle.net/11104/0264402