Search results
- 1.0585489 - MBÚ 2025 RIV GB eng J - Journal Article
Villena-Alemany, Cristian - Mujakić, Izabela - Fecskeová, L. K. - Woodhouse, J. - Auladell, A. - Dean, Jason Lawrence - Hanusová, Martina - Socha, M. - Gazulla, C. R. - Ruscheweyh, H. - Sunagawa, S. - Kavagutti, V. S. - Andrei, A. - Grossart, H. - Ghai, Rohit - Koblížek, Michal - Piwosz, Kasia
Phenology and ecological role of aerobic anoxygenic phototrophs in freshwaters.
Microbiome. Roč. 12, č. 1 (2024), č. článku 65. ISSN 2049-2618. E-ISSN 2049-2618
R&D Projects: GA ČR(CZ) GX19-28778X; GA ČR(CZ) GX20-12496X
Institutional support: RVO:61388971 ; RVO:60077344
Keywords : semi-micro determination * peg-model * diversity * bacteria * gene * growth * populations * evolution * atlantic * database * Freshwaters * Aquatic microbial ecology * Microbial seasonal succession * Long-term sampling * Aerobic anoxygenic phototrophs * pufM gene * PEG model * Photoheterotrophs
OECD category: Microbiology; Microbiology (BC-A)
Impact factor: 15.5, year: 2022
Method of publishing: Open access
https://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-024-01786-0
Permanent Link: https://hdl.handle.net/11104/0353176 - 2.0583913 - BC 2024 RIV US eng J - Journal Article
Ngugi, D.K. - Salcher, Michaela M. - Andrei, A.S. - Ghai, Rohit - Klotz, F. - Chiriac, Maria-Cecilia - Ionescu, D. - Buesing, P. - Grossart, H.P. - Xing, P. - Priscu, J. C. - Alymkulov, S. - Pester, M.
Postglacial adaptations enabled colonization and quasi-clonal dispersal of ammonia-oxidizing archaea in modern European large lakes.
Science Advances. Roč. 9, č. 5 (2023), č. článku eadc9392. ISSN 2375-2548. E-ISSN 2375-2548
Institutional support: RVO:60077344
Keywords : multiple sequence alignment * phylogenetic reconstruction * sulfolobus
OECD category: Microbiology
Impact factor: 13.6, year: 2022
Method of publishing: Open access
https://doi.org/10.1126/sciadv.adc9392
Permanent Link: https://hdl.handle.net/11104/0351891 - 3.0583806 - BC 2024 RIV GB eng J - Journal Article
Kavagutti, Vinicius Silva - Chiriac, Maria-Cecilia - Ghai, Rohit - Salcher, Michaela M. - Haber, Markus
Isolation of phages infecting the abundant freshwater iActinobacteriota/i order 'iCa/i. Nanopelagicales'.
The ISME Journal. Roč. 17, č. 6 (2023), s. 943-946. ISSN 1751-7362. E-ISSN 1751-7370
R&D Projects: GA ČR(CZ) GA21-21990S; GA ČR(CZ) GA23-06806S
Institutional support: RVO:60077344
Keywords : protein * genomes * phages
OECD category: Microbiology
Impact factor: 11, year: 2022
Method of publishing: Open access
https://doi.org/10.1038/s41396-023-01400-5
Permanent Link: https://hdl.handle.net/11104/0351805 - 4.0583805 - BC 2024 RIV GB eng J - Journal Article
Kavagutti, Vinicius Silva - Bulzu, Paul-Adrian - Chiriac, Maria-Cecilia - Salcher, Michaela M. - Mukherjee, Indranil - Shabarova, Tatiana - Grujčič, Vesna - Mehrshad, Maliheh - Kasalický, Vojtěch - Andrei, A.S. - Jezberová, Jitka - Seďa, Jaromír - Rychtecký, Pavel - Znachor, Petr - Šimek, Karel - Ghai, Rohit
High-resolution metagenomic reconstruction of the freshwater spring bloom.
Microbiome. Roč. 11, č. 1 (2023), č. článku 15. ISSN 2049-2618. E-ISSN 2049-2618
R&D Projects: GA ČR(CZ) GX20-12496X; GA ČR(CZ) GA21-21990S; GA ČR(CZ) GA19-23469S; GA ČR GA22-03662S; GA ČR(CZ) GA19-23261S; GA MŠMT(CZ) EF16_025/0007417
Institutional support: RVO:60077344
Keywords : bacterioplankton populations * seasonal succession * giant virus * chrysochromulina
OECD category: Microbiology
Impact factor: 15.5, year: 2022
Method of publishing: Open access
https://doi.org/10.1186/s40168-022-01451-4
Permanent Link: https://hdl.handle.net/11104/0351803 - 5.0583665 - BC 2024 RIV GB eng J - Journal Article
Šimek, Karel - Mukherjee, Indranil - Szoke-Nagy, Tiberiu - Haber, Markus - Salcher, Michaela M. - Ghai, Rohit
Cryptic and ubiquitous aplastidic cryptophytes are key freshwater flagellated bacterivores.
The ISME Journal. Roč. 17, č. 1 (2023), s. 84-94. ISSN 1751-7362. E-ISSN 1751-7370
R&D Projects: GA ČR(CZ) GA21-21990S; GA ČR(CZ) GX20-12496X; GA ČR GF22-35826K; GA MŠMT(CZ) EF16_025/0007417
Institutional support: RVO:60077344
Keywords : protists * sequence * marine * cryptomonas * paramecium
OECD category: Marine biology, freshwater biology, limnology
Impact factor: 11, year: 2022
Method of publishing: Open access
https://doi.org/10.1038/s41396-022-01326-4
Permanent Link: https://hdl.handle.net/11104/0351690 - 6.0563703 - BC 2023 RIV GB eng J - Journal Article
Bulzu, Paul-Adrian - Kavagutti, Vinicius Silva - Andrei, A.S. - Ghai, Rohit
The evolutionary kaleidoscope of Rhodopsins.
mSystems. Roč. 7, č. 5 (2022), č. článku 00405-22. ISSN 2379-5077. E-ISSN 2379-5077
R&D Projects: GA ČR(CZ) GX20-12496X; GA ČR(CZ) GA19-23261S; GA ČR(CZ) GA21-21990S
Institutional support: RVO:60077344
Keywords : rhodopsins * Alt-rhodopsins * AltRs * heliorhodopsins * optogenetics * metagenomics
OECD category: Microbiology
Impact factor: 6.4, year: 2022
Method of publishing: Open access
https://doi.org/10.1128/msystems.00405-22
Permanent Link: https://hdl.handle.net/11104/0340369 - 7.0560152 - BC 2022 RIV US eng J - Journal Article
Saha, S. - Bulzu, Paul-Adrian - Urajová, P. - Mareš, Jan - Konert, G. - Manoel, J.C. - Macho, M. - Ewe, D. - Hrouzek, P. - Masojídek, J. - Ghai, Rohit - Saurav, K.
Quorum-sensing signals from epibiont mediate the induction of novel microviridins in the mat-forming cyanobacterial genus Nostoc.
mSphere. Roč. 6, č. 4 (2021), č. článku e00562-21. ISSN 2379-5042. E-ISSN 2379-5042
R&D Projects: GA ČR(CZ) GX20-12496X
Institutional support: RVO:60077344
Keywords : cyanobacteria * cyanopeptides * homoserine lactones * microviridin * quorum sensing
OECD category: Microbiology
Impact factor: 5.029, year: 2021
Method of publishing: Open access
https://doi.org/10.1128/mSphere.00562-21
Permanent Link: https://hdl.handle.net/11104/0333176 - 8.0558631 - BC 2023 RIV GB eng J - Journal Article
Chiriac, Maria-Cecilia - Bulzu, Paul-Adrian - Andrei, A.S. - Okazaki, Y. - Nakano, S. - Haber, Markus - Kavagutti, Vinicius Silva - Layoun, Paul - Ghai, Rohit - Salcher, Michaela M.
Ecogenomics sheds light on diverse lifestyle strategies in freshwater CPR.
Microbiome. Roč. 10, č. 1 (2022), č. článku 84. ISSN 2049-2618. E-ISSN 2049-2618
R&D Projects: GA ČR(CZ) GA21-21990S; GA ČR(CZ) GA19-23469S; GA ČR(CZ) GX20-12496X
Institutional support: RVO:60077344
Keywords : multiple sequence alignment * in-situ hybridization * ribosomal-rna * protein secretion * database * genome * identification * bacteria * symbionts * resource * Patescibacteria * cpr * Freshwater lakes * Metagenomics * Genome reduction * Metabolism * Lifestyle * card-fish
OECD category: Ecology
Impact factor: 15.5, year: 2022
Method of publishing: Open access
https://doi.org/10.1186/s40168-022-01274-3
Permanent Link: https://hdl.handle.net/11104/0340290 - 9.0553274 - BC 2022 RIV US eng J - Journal Article
Bulzu, Paul-Adrian - Kavagutti, Vinicius Silva - Chiriac, Maria-Cecilia - Vavourakis, C.D. - Inoue, K. - Kandori, H. - Andrei, A.S. - Ghai, Rohit
Heliorhodopsin evolution is driven by photosensory promiscuity in monoderms.
mSphere. Roč. 6, č. 6 (2021), č. článku e00661. ISSN 2379-5042. E-ISSN 2379-5042
R&D Projects: GA ČR(CZ) GX20-12496X
Institutional support: RVO:60077344
Keywords : Heliorhodopsin * Metagenomics * Oxidative stress * Rhodopsins
OECD category: Microbiology
Impact factor: 5.029, year: 2021
Method of publishing: Open access
https://doi.org/10.1128/mSphere.00661-21
Permanent Link: http://hdl.handle.net/11104/0328258 - 10.0552524 - BC 2022 RIV GB eng J - Journal Article
Durán-Viseras, A. - Andrei, Adrian-Stefan - Vera-Gargallo, B. - Ghai, Rohit - Sánchez-Porro, C. - Ventosa, A.
Culturomics-based genomics sheds light on the ecology of the new haloarchaeal genus Halosegnis.
Environmental Microbiology. Roč. 23, č. 7 (2021), s. 3418-3434. ISSN 1462-2912. E-ISSN 1462-2920
Institutional support: RVO:60077344
Keywords : Microbial diversity * Hypersaline environments * Phylogenomic
OECD category: Microbiology
Impact factor: 5.476, year: 2021
Method of publishing: Limited access
https://doi.org/10.1111/1462-2920.15082
Permanent Link: http://hdl.handle.net/11104/0327634