Search results
- 1.0583323 - BTÚ 2025 RIV US eng J - Journal Article
Nováková, Zora - Tehrani, Zahra Aliakbar - Jurok, R. - Motlová, Lucia - Kutil, Zsofia - Pavlíček, Jiří - Shukla, Shivam - Choy, C. J. - Havlínová, Barbora - Baranová, Petra - Berkman, C. E. - Kuchař, M. - Černý, Jiří - Bařinka, Cyril
Structural, Biochemical, and Computational Characterization of Sulfamides as Bimetallic Peptidase Inhibitors.
Journal of Chemical Information and Modeling. Roč. 64, č. 3 (2024), s. 1030-1042. ISSN 1549-9596. E-ISSN 1549-960X
R&D Projects: GA MŠMT LX22NPO5102; GA MŠMT(CZ) LM2023055
Institutional support: RVO:86652036
Keywords : glutamate-carboxypeptidase-ii * carbonic-anhydrase inhibitors * membrane antigen * siderophore biosynthesis
OECD category: Medicinal chemistry
Impact factor: 5.6, year: 2022
Method of publishing: Open access
https://pubs.acs.org/doi/10.1021/acs.jcim.3c01542
Permanent Link: https://hdl.handle.net/11104/0353346 - 2.0578734 - BTÚ 2024 RIV US eng J - Journal Article
Das, Gargi - Ptáček, Jakub - Havlínová, Barbora - Nedvědová, Jana - Bařinka, Cyril - Nováková, Zora
Targeting Prostate Cancer Using Bispecific T-Cell Engagers against Prostate-Specific Membrane Antigen.
ACS PHARMACOLOGY & TRANSLATIONAL SCIENCE. Roč. 6, č. 11 (2023), s. 1703-1714. E-ISSN 2575-9108
R&D Projects: GA MŠMT LUAUS23254; GA MŠMT LX22NPO5102; GA MŠMT(CZ) LM2023050; GA MŠMT LM2023042
Research Infrastructure: CIISB III - 90242
Institutional support: RVO:86652036
Keywords : single-chain antibody * glutamate carboxypeptidase ii * x cd3 * psma * expression * immunotherapy
OECD category: Medicinal chemistry
Method of publishing: Open access
https://pubs.acs.org/doi/10.1021/acsptsci.3c00159
Permanent Link: https://hdl.handle.net/11104/0347642 - 3.0574532 - BTÚ 2024 RIV US eng J - Journal Article
Motlová, Lucia - Šnajdr, Ivan - Kutil, Zsofia - Andris, Erik - Ptáček, Jakub - Novotná, Adéla - Nováková, Zora - Havlínová, Barbora - Tueckmantel, W. - Dráberová, Helena - Majer, Pavel - Schutkowski, M. - Kozikowski, A. - Rulíšek, Lubomír - Bařinka, Cyril
Comprehensive Mechanistic View of the Hydrolysis of Oxadiazole-Based Inhibitors by Histone Deacetylase 6 (HDAC6).
ACS Chemical Biology. Roč. 18, č. 7 (2023), s. 1594-1610. ISSN 1554-8929. E-ISSN 1554-8937
R&D Projects: GA ČR(CZ) GA21-31806S; GA ČR(CZ) GA23-05940S; GA MŠMT(CZ) LUAUS23247
Research Infrastructure: CIISB III - 90242; EATRIS-CZ IV - 90253
Institutional support: RVO:86652036 ; RVO:61388963
Keywords : BASIS-SETS * COSMO * ENERGY * REFINEMENT
OECD category: Biochemistry and molecular biology
Impact factor: 4, year: 2022
Method of publishing: Open access
https://pubs.acs.org/doi/10.1021/acschembio.3c00212
Permanent Link: https://hdl.handle.net/11104/0347139 - 4.0574529 - BTÚ 2024 RIV GB eng J - Journal Article
Svoboda, Jakub - Berdár, Daniel - Kolenko, Petr - Černý, Jiří - Nováková, Zora - Pavlíček, Jiří - Schneider, Bohdan
Conformation-based refinement of 18-mer DNA structures.
Acta Crystallographica Section D-Biological Crystallography. Roč. 79, JUL 2023 (2023), s. 655-665. ISSN 1399-0047. E-ISSN 2059-7983
R&D Projects: GA MŠMT(CZ) LTAUSA18197; GA MŠMT EF16_019/0000778
Institutional support: RVO:86652036
Keywords : DNA structure * dnatco.datmos.org * structure validation * structure refinement * base pairing
OECD category: Biochemistry and molecular biology
Impact factor: 2.2, year: 2022
Method of publishing: Open access
https://scripts.iucr.org/cgi-bin/paper?S2059798323004679
Permanent Link: https://hdl.handle.net/11104/0345411 - 5.0568950 - BTÚ 2024 RIV GB eng J - Journal Article
Shukla, Shivam - Komárek, Jan - Nováková, Zora - Nedvědová, Jana - Ustinova, Kseniya - Vaňková, Pavla - Kadek, A. - Uetrecht, C. - Mertens, H. - Bařinka, Cyril
In-solution structure and oligomerization of human histone deacetylase 6-an integrative approach.
FEBS Journal. Roč. 290, č. 3 (2023), s. 821-836. ISSN 1742-464X. E-ISSN 1742-4658
R&D Projects: GA ČR(CZ) GA21-31806S
Research Infrastructure: CIISB III - 90242
Institutional support: RVO:86652036
Keywords : acetylation * analytical ultracentrifugation * intrinsically disordered regions * oligomerization * small-angle X-ray scattering
OECD category: Biochemistry and molecular biology
Impact factor: 5.4, year: 2022
Method of publishing: Limited access
https://febs.onlinelibrary.wiley.com/doi/10.1111/febs.16616
Permanent Link: https://hdl.handle.net/11104/0342353 - 6.0566024 - ÚOCHB 2023 RIV GB eng J - Journal Article
Jedličková, L. - Peterková, K. - Boateng, E. M. - Ulrychová, Lenka - Vacek, V. - Kutil, Zsofia - Jiang, Z. - Nováková, Zora - Šnajdr, Ivan - Kim, J. - O’Donoghue, A. J. - Bařinka, Cyril - Dvořák, Jan
Characterization of glutamate carboxypeptidase 2 orthologs in trematodes.
Parasites & Vectors. Roč. 15, č. 1 (2022), č. článku 480. ISSN 1756-3305. E-ISSN 1756-3305
R&D Projects: GA ČR(CZ) GA18-14167S; GA ČR(CZ) GJ19-22269Y
Institutional support: RVO:61388963 ; RVO:86652036
Keywords : platyhelminth * M28B metalloproteases * prostate specific-membrane antigen * Schistosoma mansoni * Fasciola hepatica * RNA in situ hybridization * folate hydrolase * immunohistochemistry * NAALADase
OECD category: Biochemistry and molecular biology
Impact factor: 3.2, year: 2022
Method of publishing: Open access
https://doi.org/10.1186/s13071-022-05556-5
Permanent Link: https://hdl.handle.net/11104/0337467 - 7.0565700 - BTÚ 2023 RIV DE eng J - Journal Article
Nováková, Zora - Miloševič, Mirko - Kutil, Zsofia - Ondráková, Markéta - Havlínová, Barbora - Kašpárek, Petr - Sandoval-Acuna, Cristian - Korandová, Zuzana - Truksa, Jaroslav - Vrbacký, Marek - Rohlena, Jakub - Bařinka, Cyril
Generation and characterization of human U-2 OS cell lines with the CRISPR/Cas9-edited protoporphyrinogen oxidase IX gene.
Scientific Reports. Roč. 12, č. 1 (2022), č. článku 17081. ISSN 2045-2322. E-ISSN 2045-2322
R&D Projects: GA MZd(CZ) NV17-32727A; GA ČR GA19-20553S; GA ČR(CZ) GA22-34507S; GA MŠMT(CZ) LM2018129; GA MŠMT(CZ) EF18_046/0016045
Institutional support: RVO:86652036 ; RVO:68378050 ; RVO:67985823
Keywords : DELTA-AMINOLEVULINATE SYNTHASE * VARIEGATE PORPHYRIA * MOLECULAR TARGET
OECD category: Cell biology
Impact factor: 4.6, year: 2022
Method of publishing: Open access
https://www.nature.com/articles/s41598-022-21147-x
Permanent Link: https://hdl.handle.net/11104/0337228 - 8.0551535 - BTÚ 2023 RIV US eng J - Journal Article
Nováková, Zora - Mikesova, Jana - Ondráková, Markéta - Kutil, Zsofia - Veselá, K. - Martásek, P. - Bařinka, Cyril
Molecular characterization of a novel His333Arg variant of human protoporphyrinogen oxidase IX.
Biochemical and Biophysical Research Communications. Roč. 588, JAN 15 2022 (2022), s. 182-186. ISSN 0006-291X. E-ISSN 1090-2104
R&D Projects: GA MZd(CZ) NV17-32727A
Institutional support: RVO:86652036
Keywords : variegate porphyria * structural insight * mutations * gene * Protoporphyrinogen oxidase IX
OECD category: Biophysics
Impact factor: 3.1, year: 2022
Method of publishing: Open access
https://www.sciencedirect.com/science/article/pii/S0006291X21016971?via%3Dihub
Permanent Link: http://hdl.handle.net/11104/0327302 - 9.0550573 - BTÚ 2023 RIV US eng J - Journal Article
Yuan, W. - Liu, B. - Sanda, M. - Wei, R. - Benicky, J. - Nováková, Zora - Bařinka, Cyril - Goldman, R.
Glycoforms of human prostate-specific membrane antigen (PSMA) in human cells and prostate tissue.
Prostate. Roč. 82, č. 1 (2022), s. 132-144. ISSN 0270-4137. E-ISSN 1097-0045
R&D Projects: GA ČR(CZ) GA18-04790S; GA ČR(CZ) GA18-14167S; GA MŠMT(CZ) LTAUSA18196
Institutional support: RVO:86652036
Keywords : glutamate-carboxypeptidase-ii * n-glycosylation * cancer * expression * folate hydrolase
OECD category: Endocrinology and metabolism (including diabetes, hormones)
Impact factor: 2.8, year: 2022
Method of publishing: Limited access
https://onlinelibrary.wiley.com/doi/10.1002/pros.24254
Permanent Link: https://hdl.handle.net/11104/0340747 - 10.0541410 - BTÚ 2021 RIV GB eng J - Journal Article
Ptáček, Jakub - Zhang, D. - Qiu, L. - Kruspe, S. - Motlová, Lucia - Kolenko, Petr - Nováková, Zora - Shubham, S. - Havlínová, Barbora - Baranová, Petra - Chen, S.-J. - Zou, X. - Giangrande, P. - Bařinka, Cyril
Structural basis of prostate-specific membrane antigen recognition by the A9g RNA aptamer.
Nucleic Acids Research. Roč. 48, č. 19 (2020), s. 11130-11145. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA ČR(CZ) GA18-04790S; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) LTAUSA18196
Institutional support: RVO:86652036
Keywords : GLUTAMATE-CARBOXYPEPTIDASE-II * MONOCLONAL-ANTIBODIES * CRYSTAL-STRUCTURE
OECD category: Biochemistry and molecular biology
Impact factor: 16.971, year: 2020
Method of publishing: Open access
https://academic.oup.com/nar/article/48/19/11130/5856120
Permanent Link: http://hdl.handle.net/11104/0318975