Search results
- 1.0559941 - ÚMG 2023 RIV GB eng J - Journal Article
Gray, M.W. - Burger, G. - Derelle, R. - Klimeš, V. - Leger, M.M. - Sarrasin, M. - Vlček, Čestmír - Roger, A. J. - Eliáš, M. - Lang, B.F.
The draft nuclear genome sequence and predicted mitochondrial proteome of Andalucia godoyi, a protist with the most gene-rich and bacteria-like mitochondrial genome.
BMC BIOLOGY. Roč. 18, č. 1 (2020), č. článku 22. E-ISSN 1741-7007
Institutional support: RVO:68378050
Keywords : Mitochondrion * Mitochondrial genome * Mitochondrial proteome * Mitochondrial evolution * Protist * Jakobids * Andalucia godoyi
OECD category: Cell biology
Impact factor: 7.431, year: 2020
Method of publishing: Open access
https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-020-0741-6
Permanent Link: https://hdl.handle.net/11104/0333061 - 2.0555440 - ÚMG 2022 RIV US eng J - Journal Article
Žárský, V. - Klimeš, V. - Pačes, Jan - Vlček, Čestmír - Hradilová, Miluše - Benes, V. - Nývltová, E. - Hrdý, I. - Pyrih, J. - Mach, J. - Barlow, L. - Stairs, C.W. - Eme, L. - Hall, N. - Eliáš, M. - Dacks, Joel Bryan - Roger, A. - Tachezy, J.
The Mastigamoeba balamuthi Genome and the Nature of the Free-Living Ancestor of Entamoeba.
Molecular Biology and Evolution. Roč. 38, č. 6 (2021), s. 2240-2259. ISSN 0737-4038. E-ISSN 1537-1719
R&D Projects: GA MŠMT(CZ) EF16_019/0000759; GA MŠMT(CZ) LM2018131
Research Infrastructure: ELIXIR-CZ II - 90131
Institutional support: RVO:68378050 ; RVO:60077344
Keywords : evolution of parasitism * lateral gene transfer * pathway complexity * Archamoebae * chitinous cysts * Mastigamoeba
OECD category: Biochemistry and molecular biology; Microbiology (BC-A)
Impact factor: 8.800, year: 2021
Method of publishing: Open access
https://academic.oup.com/mbe/article/38/6/2240/6126414?login=false
Permanent Link: http://hdl.handle.net/11104/0329973 - 3.0553925 - BC 2022 RIV GB eng J - Journal Article
Horváthová, L. - Žárský, V. - Pánek, T. - Derelle, R. - Pyrih, Jan - Motyčková, A. - Klapsťová, V. - Vinopalova, M. - Marková, L. - Voleman, L. - Klimeš, V. - Petrů, M. - Vaitová, Z. - Čepička, I. - Hryzakova, K. - Harant, K. - Gray, M.W. - Chami, M. - Guilvout, I. - Francetic, O. - Lang, B. - Vlček, Čestmír - Tsaousis, A. - Eliaš, M. - Doležal, P.
Analysis of diverse eukaryotes suggests the existence of an ancestral mitochondrial apparatus derived from the bacterial type II secretion system.
Nature Communications. Roč. 12, č. 1 (2021), č. článku 2947. E-ISSN 2041-1723
R&D Projects: GA MŠMT(CZ) EF16_019/0000759
Institutional support: RVO:60077344 ; RVO:68378050
Keywords : multiple sequence alignment * protein secretion * swiss-model * molecular architecture * structural insights * crystal-structure * atpase gspe * membrane * prediction * complex
OECD category: Microbiology; Microbiology (UMG-J)
Impact factor: 17.694, year: 2021
Method of publishing: Open access
https://www.nature.com/articles/s41467-021-23046-7
Permanent Link: http://hdl.handle.net/11104/0328602 - 4.0507481 - ÚMG 2020 RIV GB eng J - Journal Article
Panek, T. - Zihala, D. - Sokol, M. - Derelle, R. - Klimeš, V. - Hradilová, Miluše - Zadrobilkova, E. - Susko, E. - Roger, A. J. - Čepička, I. - Eliáš, M.
Nuclear genetic codes with a different meaning of the UAG and the UAA codon.
BMC BIOLOGY. Roč. 15, February (2017), č. článku 8. E-ISSN 1741-7007
Institutional support: RVO:68378050
Keywords : Codon reassignment * Evolution * Evolutionary constraint * Fornicata * Genetic code * Iotanema spirale * Lygus hesperus * Protists * Rhizaria * Transcriptome
OECD category: Cell biology
Impact factor: 5.770, year: 2017
Method of publishing: Open access
https://bmcbiol.biomedcentral.com/articles/10.1186/s12915-017-0353-y
Permanent Link: http://hdl.handle.net/11104/0298463 - 5.0507395 - BC 2020 RIV US eng J - Journal Article
Gentekaki, E. - Curtis, B.A. - Stairs, C.W. - Klimeš, V. - Eliaš, M. - Salas-Leiva, D.E. - Herman, E.K. - Eme, L. - Arias, M.C. - Henrissat, B. - Hilliou, F. - Klute, M.J. - Suga, H. - Malik, S.B. - Pightling, A.W. - Kolísko, Martin - Rachubinski, R.A. - Schlacht, A. - Soanes, D.M. - Tsaousis, A.D. - Archibald, J.M. - Ball, S.G. - Dacks, J.B. - Clark, C.G. - van der Giezen, M. - Roger, A. J.
Extreme genome diversity in the hyper-prevalent parasitic eukaryote Blastocystis.
PLOS Biology. Roč. 15, č. 9 (2017), č. článku e2003769. ISSN 1544-9173. E-ISSN 1545-7885
R&D Projects: GA ČR GA13-33039S
Institutional support: RVO:60077344
Keywords : anaphase-promoting complex * hidden markov model * protein-kinase * in-vitro * entamoeba-histolytica * cysteine proteases * rhomboid protease * surface-coat * metabolism * sequence
OECD category: Plant sciences, botany
Impact factor: 9.163, year: 2017
Method of publishing: Open access
https://journals.plos.org/plosbiology/article/file?id=10.1371/journal.pbio.2003769&type=printable
Permanent Link: http://hdl.handle.net/11104/0298388 - 6.0498855 - BC 2019 RIV GB eng J - Journal Article
Záhonová, K. - Füssy, Zoltán - Birčák, E. - Vanclová-Novák, A.M.G. - Klimeš, V. - Vesteg, M. - Krajčovič, J. - Oborník, Miroslav - Eliáš, M.
Peculiar features of the plastids of the colourless alga Euglena longa and photosynthetic euglenophytes unveiled by transcriptome analyses.
Scientific Reports. Roč. 8, NOV 16 2018 (2018), č. článku 17012. ISSN 2045-2322. E-ISSN 2045-2322
R&D Projects: GA ČR(CZ) GA16-24027S; GA MŠMT(CZ) EF16_019/0000759
Grant - others:Grantová agentura SR(SK) VEGA 1/0535/17
Institutional support: RVO:60077344
Keywords : HORIZONTAL GENE-TRANSFER * PROTEIN IMPORT * CHLOROPLAST * RNA
OECD category: Microbiology
Impact factor: 4.011, year: 2018
https://www.nature.com/articles/s41598-018-35389-1
Permanent Link: http://hdl.handle.net/11104/0291144 - 7.0492848 - BÚ 2019 RIV GB eng J - Journal Article
Yurchenko, T. - Ševčíková, T. - Přibyl, Pavel - El Karkouri, K. - Klimeš, V. - Amaral, R. - Zbránková, V. - Kim, E. - Raoult, D. - Santos, L. M. A. - Eliáš, M.
A gene transfer event suggests a long-term partnership between eustigmatophyte algae and a novel lineage of endosymbiotic bacteria.
The ISME Journal. Roč. 12, č. 9 (2018), s. 2163-2175. ISSN 1751-7362. E-ISSN 1751-7370
Institutional support: RVO:67985939
Keywords : endosymbiotické baktérie * eustigmatofytní řasy * Phycorickettsia trachydisci
OECD category: Biology (theoretical, mathematical, thermal, cryobiology, biological rhythm), Evolutionary biology
Impact factor: 9.493, year: 2018
Permanent Link: http://hdl.handle.net/11104/0286275 - 8.0473015 - ÚMG 2017 RIV GB eng J - Journal Article
Ševčíková, T. - Klimeš, V. - Zbránková, V. - Strnad, Hynek - Hroudová, Miluše - Vlček, Čestmír - Eliáš, M.
A Comparative Analysis of Mitochondrial Genomes in Eustigmatophyte Algae.
Genome Biology and Evolution. Roč. 8, č. 3 (2016), s. 705-722. ISSN 1759-6653. E-ISSN 1759-6653
R&D Projects: GA ČR GA13-33039S
Grant - others:GA MŠk(CZ) LO1208; GA MŠk(CZ) ED2.1.00/03.0100
Institutional support: RVO:68378050
Keywords : Eustigmatophyceae * evolution * phylogenomics * split genes * Stramenopiles * suppressor tRNA
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 3.979, year: 2016
Permanent Link: http://hdl.handle.net/11104/0270186 - 9.0455785 - ÚMG 2016 RIV US eng J - Journal Article
Derelle, R. - Torruella, G. - Klimeš, V. - Brinkmann, H. - Kim, E. - Vlček, Čestmír - Lang, B.F. - Eliáš, M.
Bacterial proteins pinpoint a single eukaryotic root.
Proceedings of the National Academy of Sciences of the United States of America. Roč. 112, č. 7 (2015), E693-E699. ISSN 0027-8424. E-ISSN 1091-6490
R&D Projects: GA ČR GA13-24983S
Grant - others:GA MŠk(CZ) ED2.1.00/03.0100; Howard Hughes Medical Institute International Early Career Scientist Program(US) 55007424; Spanish Ministry of Economy and Competitiveness, European Molecular Biology Organization Young Investigator Program(ES) BFU2012-31329; Spanish Ministry of Economy and Competitiveness, "Centro de Excelencia Severo Ochoa" - European Regional Development Fund(ES) Sev-2012-0208, BES-2013-064004
Institutional support: RVO:68378050
Keywords : eukaryote phylogeny * phylogenomics * Opimoda * Diphoda * LECA
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 9.423, year: 2015
Permanent Link: http://hdl.handle.net/11104/0256408 - 10.0451323 - BC 2016 RIV GB eng J - Journal Article
Ševčíková, T. - Horák, Aleš - Klimeš, V. - Zbránková, V. - Demir-Hilton, E. - Sudek, S. - Jenkis, J. - Schmutz, J. - Přibyl, Pavel - Fousek, Jan - Vlček, Čestmír - Lang, B.F. - Oborník, Miroslav - Worden, A.Z. - Eliáš, M.
Updating algal evolutionary relationships through plastid genome sequencing: did alveolate plastids emerge through endosymbiosis of an ochrophyte?
Scientific Reports. Roč. 5, MAY 28 2015 (2015), s. 10134. ISSN 2045-2322. E-ISSN 2045-2322
R&D Projects: GA ČR(CZ) GA13-33039S; GA ČR GPP506/12/P931
Grant - others:GA MŠk(CZ) LO1208; GA MŠk(CZ) ED2.1.00/03.0100
Institutional support: RVO:60077344 ; RVO:67985939 ; RVO:68378050
Keywords : phylogenetic position * Chromera velia * Dinoflagellate
Subject RIV: EG - Zoology; EF - Botanics (UMG-J); EF - Botanics (BU-J)
Impact factor: 5.228, year: 2015
Permanent Link: http://hdl.handle.net/11104/0252506