Search results
- 1.0584244 - BC 2024 RIV US eng J - Journal Article
Kuo, Y. T. - Câmara, A. S. - Schubert, V. - Neumann, Pavel - Macas, Jiří - Melzer, M. - Chen, J. - Fuchs, J. - Abel, S. - Klocke, E. - Huettel, B. - Himmelbach, A. - Demidov, D. - Dunemann, F. - Mascher, M. - Ishii, T. - Marques, A. - Houben, A.
Holocentromeres can consist of merely a few megabase-sized satellite arrays.
Nature Communications. Roč. 14, č. 1 (2023), č. článku 3502. E-ISSN 2041-1723
R&D Projects: GA ČR(CZ) GA20-25440S
Institutional support: RVO:60077344
Keywords : nuclear-dna content * histone h3 * chionographis liliaceae * luzula-elegans * centromere * chromosomes * arabidopsis * methylation * euchromatin * generation
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 16.6, year: 2022
Method of publishing: Open access
https://www.nature.com/articles/s41467-023-38922-7
Permanent Link: https://hdl.handle.net/11104/0352321 - 2.0572694 - ÚEB 2024 RIV US eng J - Journal Article
Kubalová, I. - Câmara, A. S. - Cápal, Petr - Beseda, Tomáš - Rouillard, J.-M. - Krause, G. M. - Holušová, Kateřina - Toegelová, Helena - Himmelbach, A. - Stein, N. - Houben, A. - Doležel, Jaroslav - Mascher, M. - Šimková, Hana - Schubert, V.
Helical coiling of metaphase chromatids.
Nucleic Acids Research. Roč. 51, č. 6 (2023), s. 2641-2654. ISSN 0305-1048. E-ISSN 1362-4962
R&D Projects: GA ČR(CZ) GC18-14450J; GA MŠMT(CZ) EF16_019/0000827
Institutional support: RVO:61389030
Keywords : MITOTIC CHROMOSOME STRUCTURE * SPIRAL STRUCTURE * TRADESCANTIA-REFLEXA
OECD category: Plant sciences, botany
Impact factor: 14.9, year: 2022
Method of publishing: Open access
https://doi.org/10.1093/nar/gkad028
Permanent Link: https://hdl.handle.net/11104/0343302File Download Size Commentary Version Access 2023_Kubalova_NUCLEIC ACIDS RESEARCH_2641_____@@@.pdf 2 12.3 MB Other open-access - 3.0571900 - ÚEB 2024 RIV DE eng J - Journal Article
Jayakodi, M. - Golicz, A. A. - Kreplak, J. - Fechete, L. I. - Angra, D. - Bednář, P. - Bornhofen, E. - Zhang, H. - Boussageon, R. - Kaur, S. - Cheung, K. - Čížková, Jana - Gundlach, H. - Hallab, A. - Imbert, E. - Keeble-Gagnère, G. - Koblížková, Andrea - Kobrlová, L. - Krejčí, P. - Mouritzen, T. W. - Neumann, Pavel - Nadzieja, M. - Nielsen, L. K. - Novák, Petr - Orabi, J. - Padmarasu, S. - Robertson-Shersby-Harvie, T. - Robledillo, Laura Avila - Schiemann, A. - Tanskanen, J. - Törönen, P. - Warsame, A. O. - Wittenberg, A. H.J. - Himmelbach, A. - Aubert, G. - Courty, P.-E. - Doležel, Jaroslav - Holm, L. U. - Janss, L. L. - Khazaei, H. - Macas, Jiří - Mascher, M. - Smýkal, P. - Snowdon, R. J. - Stein, N. - Stoddard, F. L. - Stougaard, J. - Tayeh, N. - Torres, A. M. - Usadel, C. - Schubert, I. - O’Sullivan, D. - Schulman, A. H. - Andersen, S.U.
The giant diploid faba genome unlocks variation in a global protein crop.
Nature. Roč. 615, č. 7953 (2023), s. 652-659. ISSN 0028-0836. E-ISSN 1476-4687
R&D Projects: GA ČR(CZ) GA20-24252S; GA MŠMT(CZ) LM2018131
Institutional support: RVO:61389030 ; RVO:60077344
Keywords : NUCLEAR-DNA CONTENT * SEQUENCE * PROGRAM
OECD category: Genetics and heredity (medical genetics to be 3); Genetics and heredity (medical genetics to be 3) (BC-A)
Impact factor: 64.8, year: 2022
Method of publishing: Open access
https://doi.org/10.1038/s41586-023-05791-5
Permanent Link: https://hdl.handle.net/11104/0342790File Download Size Commentary Version Access 2023_Jayakodi_NATURE_652.pdf 2 11.5 MB Other open-access - 4.0557704 - ÚEB 2023 RIV GB eng J - Journal Article
Yu, G. - Matny, O. - Champouret, N. - Steuernagel, B. - Moscou, M. J. - Hernández-Pinzón, I. - Green, P.R. - Hayta, S. - Smedley, M. A. - Harwood, W. - Kangara, N. - Yue, Y. - Gardener, C. - Banfield, M. J. - Olivera, P. D. - Welchin, C. - Simmons, J. - Millet, E. - Minz-Dub, A. - Ronen, M. - Avni, R. - Sharon, A. - Patpour, M. - Justesen, A.B. - Jayakodi, M. - Himmelbach, A. - Stein, N. - Wu, S. - Poland, J. - Ens, J. - Pozniak, C. - Karafiátová, Miroslava - Molnár, István - Doležel, Jaroslav - Ward, E. J. - Reuber, T. L. - Jones, J. D.G. - Mascher, M. - Steffenson, B. J. - Wulff, B. B. H.
Aegilops sharonensis genome-assisted identification of stem rust resistance gene Sr62.
Nature Communications. Roč. 13, č. 1 (2022), č. článku 1607. E-ISSN 2041-1723
Institutional support: RVO:61389030
Keywords : F-SP TRITICI * DISEASE-RESISTANCE * CONFERS RESISTANCE
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 16.6, year: 2022
Method of publishing: Open access
http://doi.org/10.1038/s41467-022-29132-8
Permanent Link: http://hdl.handle.net/11104/0331616File Download Size Commentary Version Access 2022_Yu_Nature Communications_1607.pdf 1 2.2 MB Other open-access - 5.0545921 - ÚEB 2022 RIV US eng J - Journal Article
Rabanus-Wallace, M. T. - Hackauf, B. - Mascher, M. - Lux, T. - Wicker, T. - Gundlach, H. - Baez, M. - Houben, A. - Mayer, K. F. X. - Guo, L. - Poland, J. - Pozniak, C. - Walkowiak, S. - Melonek, J. - Praz, C. R. - Schreiber, M. - Budak, H. - Heuberger, M. - Steuernagel, B. - Wulff, B. - Börner, A. - Byrns, B. - Čížková, Jana - Fowler, D. - Fritz, A. - Himmelbach, A. - Kaithakottil, G. - Keilwagen, J. - Keller, B. - Konkin, D. - Larsen, J. - Li, Q. - Myśków, B. - Padmarasu, S. - Rawat, N. - Sesiz, U. - Biyiklioglu-Kaya, S. - Sharpe, A. J. - Šimková, Hana - Small, I. - Swarbreck, D. - Toegelová, Helena - Tsvetkova, N. - Voylokov, A. V. - Vrána, Jan - Bauer, E. - Bolibok-Bragoszewska, H. - Doležel, Jaroslav - Hall, A. - Jia, J. - Korzun, V. - Laroche, A. - Ma, X. F. - Ordon, F. - Özkan, H. - Rakoczy-Trojanowska, M. - Scholz, U. - Schulman, A. H. - Siekmann, G. - Stojałowski, S. - Tiwari, V.K. - Spannagl, M. - Stein, N.
Chromosome-scale genome assembly provides insights into rye biology, evolution and agronomic potential.
Nature Genetics. Roč. 53, č. 4 (2021), s. 564-573. ISSN 1061-4036. E-ISSN 1546-1718
R&D Projects: GA ČR(CZ) GA17-17564S; GA MŠMT(CZ) EF16_019/0000827
Keywords : Chromosome Mapping * Secale * Translocation Lines
OECD category: Biochemistry and molecular biology
Impact factor: 41.376, year: 2021
Method of publishing: Open access
http://doi.org/10.1038/s41588-021-00807-0
Permanent Link: http://hdl.handle.net/11104/0322530File Download Size Commentary Version Access 2021_Rabanus-Wallace_Nature Genetics_564.pdf 1 5.1 MB Other open-access - 6.0498272 - ÚEB 2019 RIV GB eng J - Journal Article
Himmelbach, A. - Ruban, A.V. - Walde, M. - Šimková, Hana - Doležel, Jaroslav - Hastie, A. - Stein, N. - Mascher, M.
Discovery of multi-megabase polymorphic inversions by chromosome conformation capture sequencing in large-genome plant species.
Plant Journal. Roč. 96, č. 6 (2018), s. 1309-1316. ISSN 0960-7412. E-ISSN 1365-313X
R&D Projects: GA MŠMT(CZ) LO1204
Institutional support: RVO:61389030
Keywords : barley * chromosomal inversions * chromosome conformation capture sequencing * genomics * Hordeum vulgare * optical mapping * technical advance
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 5.726, year: 2018
Permanent Link: http://hdl.handle.net/11104/0290664File Download Size Commentary Version Access 2018_Himmelbach_Plant Journal_1309.pdf 8 453.7 KB Other open-access - 7.0476491 - ÚEB 2018 RIV GB eng J - Journal Article
Beier, S. - Himmelbach, A. - Colmsee, C. - Zhang, X. Q. - Barrero, R. A. - Hastie, A. - Šimková, Hana - Staňková, Helena - Vrána, Jan - Chan, S. - Zhou, G. - Poland, J. - Bellgard, M. I. - Houben, A. - Doležel, Jaroslav - Ayling, S. - Lonardi, S. - Scholz, U. - Stein, N. - Mascher, M. … Total 60 authors
Construction of a map-based reference genome sequence for barley, Hordeum vulgare L.
Scientific Data. Roč. 4, APR 27 (2017), č. článku 170044. E-ISSN 2052-4463
R&D Projects: GA MŠMT(CZ) LO1204
Institutional support: RVO:61389030
Keywords : BACTERIAL ARTIFICIAL CHROMOSOMES * PHYSICAL MAP * LIBRARIES
OECD category: Plant sciences, botany
Impact factor: 5.311, year: 2017
Permanent Link: http://hdl.handle.net/11104/0272979File Download Size Commentary Version Access 2017_Beier_SCIENTIFIC DATA_170044.pdf 5 1.6 MB Other open-access - 8.0476487 - ÚEB 2018 RIV GB eng J - Journal Article
Mascher, M. - Gundlach, H. - Himmelbach, A. - Beier, S. - Twardziok, S. O. - Wicker, T. - Šimková, Hana - Staňková, Helena - Vrána, Jan - Chan, S. - Munoz-Amatrian, M. - Houben, A. - Doležel, Jaroslav - Ayling, S. - Lonardi, S. - Mayer, K.F.X. - Zhang, G. - Braumann, I. - Spannagl, M. - Li, C. - Waugh, R. - Stein, N. … Total 76 authors
A chromosome conformation capture ordered sequence of the barley genome.
Nature. Roč. 544, č. 7651 (2017), s. 427-433. ISSN 0028-0836. E-ISSN 1476-4687
R&D Projects: GA MŠMT(CZ) LO1204
Institutional support: RVO:61389030
Keywords : bacterial artificial chromosomes * inverted-repeat elements * complex-plant genomes * hi-c * environmental adaptation * ltr retrotransposons * structural variation * maize genome * software * database
OECD category: Plant sciences, botany
Impact factor: 41.577, year: 2017
Permanent Link: http://hdl.handle.net/11104/0272975File Download Size Commentary Version Access 2017_Mascher_NATURE_426.pdf 2 7.2 MB Other open-access - 9.0473677 - ÚEB 2018 RIV GB eng J - Journal Article
Ma, W. - Gabriel, T.S. - Martis, M.M. - Gursinsky, T. - Schubert, V. - Vrána, Jan - Doležel, Jaroslav - Grundlach, H. - Altschmied, L. - Scholz, U. - Himmelbach, A. - Behrens, S.E. - Banaei-Moghaddam, A.M. - Houben, A.
Rye B chromosomes encode a functional Argonaute-like protein with in vitro slicer activities similar to its A chromosome paralog.
New Phytologist. Roč. 213, č. 2 (2017), s. 916-928. ISSN 0028-646X. E-ISSN 1469-8137
R&D Projects: GA MŠMT(CZ) LO1204; GA ČR GBP501/12/G090
Institutional support: RVO:61389030
Keywords : rna-polymerase-ii * ribosomal-rna * accessory chromosomes * plant argonautes * gene-expression * evolution * transcription * pseudogenes * sequences * identification * Argonaute * B chromosomes * B-located genes * gene erosion. gene expression * pseudogenization * Secale cereale
OECD category: Plant sciences, botany
Impact factor: 7.433, year: 2017
Permanent Link: http://hdl.handle.net/11104/0270807File Download Size Commentary Version Access 2017_Ma_NEW PHYTOLOGIST_904.pdf 11 1.7 MB Other open-access - 10.0440518 - BC 2016 RIV NL eng J - Journal Article
Banaei-Moghaddam, A.M. - Martis, M.M. - Macas, Jiří - Gundlach, H. - Himmelbach, A. - Altschmied, L. - Mayer, K. F. X. - Houben, A.
Genes on B chromosomes: Old questions revisited with new tools.
Biochimica et Biophysica Acta-Gene Regulatory Mechanisms. Roč. 1849, č. 1 (2015), s. 64-70. ISSN 1874-9399. E-ISSN 1876-4320
R&D Projects: GA ČR GBP501/12/G090
Institutional support: RVO:60077344
Keywords : Gene regulation * genome evolution * junk DNA * pseudogene * transcription
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 5.373, year: 2015
Permanent Link: http://hdl.handle.net/11104/0243608