Search results
- 1.0574533 - BTÚ 2024 RIV US eng J - Journal Article
Malý, Martin - Kolenko, Petr - Stránský, Jan - Švecová, Leona - Dušková, Jarmila - Koval, Tomáš - Skálová, Tereza - Trundová, Mária - Adámková, Kristýna - Černý, Jiří - Božíková, Paulina - Dohnálek, Jan
Tetracycline-modifying enzyme SmTetX from Stenotrophomonas maltophilia.
Acta Crystallographica Section F-Structural Biology and Crystallization Communications. Roč. 79, JUL 2023 (2023), s. 180-192. ISSN 1744-3091. E-ISSN 2053-230X
R&D Projects: GA MŠMT EF16_019/0000778; GA MŠMT EF15_003/0000447; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) EF18_046/0015974
Research Infrastructure: CIISB III - 90242
Institutional support: RVO:86652036
Keywords : FAD-dependent monooxygenases * tetracycline * antibiotic resistance
OECD category: Biochemistry and molecular biology
Impact factor: 0.9, year: 2022
Method of publishing: Open access
https://scripts.iucr.org/cgi-bin/paper?S2053230X23005381
Permanent Link: https://hdl.handle.net/11104/0346203 - 2.0561062 - BTÚ 2023 RIV GB eng J - Journal Article
Blaha, J. - Skálová, Tereza - Kalousková, B. - Skořepa, O. - Cmunt, D. - Grobárová, V. - Pažický, S. - Polachova, E. - Abreu, C. - Stránský, Jan - Koval, Tomáš - Dušková, Jarmila - Zhao, Y. - Harlos, K. - Hašek, Jindřich - Dohnálek, Jan - Vaněk, O.
Structure of the human NK cell NKR-P1:LLT1 receptor:ligand complex reveals clustering in the immune synapse.
Nature Communications. Roč. 13, č. 1 (2022), č. článku 5022. E-ISSN 2041-1723
R&D Projects: GA ČR(CZ) GA15-15181S; GA ČR(CZ) GA18-10687S; GA MŠMT EF15_003/0000447; GA MŠMT(CZ) LM2018127
Institutional support: RVO:86652036
Keywords : HIGH-LEVEL EXPRESSION * TRANSCRIPT 1 LLT1 * T-CELLS
OECD category: Immunology
Impact factor: 16.6, year: 2022
Method of publishing: Open access
https://www.nature.com/articles/s41467-022-32577-6
Permanent Link: https://hdl.handle.net/11104/0340821 - 3.0560263 - BTÚ 2023 RIV GB eng J - Journal Article
Koval'ová, Terezia - Koval, Tomáš - Stránský, Jan - Kolenko, Petr - Dušková, Jarmila - Švecová, Leona - Vodickova, P. - Spiwok, V. - Benešová, E. - Lipovová, P. - Dohnálek, Jan
The first structure-function study of GH151 alpha-l-fucosidase uncovers new oligomerization pattern, active site complementation, and selective substrate specificity.
FEBS Journal. Roč. 289, č. 16 (2022), č. článku 16387. ISSN 1742-464X. E-ISSN 1742-4658
R&D Projects: GA MŠMT(CZ) LM2015043; GA MŠMT EF15_003/0000447; GA MŠMT(CZ) EF16_013/0001776; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) LM2018127
Institutional support: RVO:86652036
Keywords : active site complementation * crystal structure * gh151 * alpha-l-fucosidase
OECD category: Biochemistry and molecular biology
Impact factor: 5.4, year: 2022
Method of publishing: Limited access
https://febs.onlinelibrary.wiley.com/doi/10.1111/febs.16387
Permanent Link: https://hdl.handle.net/11104/0340729 - 4.0550566 - BTÚ 2022 RIV GB eng J - Journal Article
Kolenko, Petr - Stránský, Jan - Koval, Tomáš - Malý, Martin - Dohnálek, Jan
SHELIXIR: automation of experimental phasing procedures using SHELXC/D/E.
Journal of Applied Crystallography. Roč. 54, č. 3 (2021), s. 996-1005. ISSN 0021-8898. E-ISSN 1600-5767
R&D Projects: GA MŠMT(CZ) LM2018127
Grant - others:Ministerstvo průmyslu a obchodu - GA MPO(CZ) CZ.02.1.01/0.0/0.0/16_019/0000778; OP VVV - ELIBIO(XE) CZ.02.1.01/0.0/0.0/15_003/0000447; GA MŠk(CZ) CZ.1.05/1.1.00/02.0109
Institutional support: RVO:86652036
Keywords : x-ray * crystal-structure * data processing * experimental phasing
OECD category: Analytical chemistry
Impact factor: 4.868, year: 2021
Method of publishing: Limited access
https://scripts.iucr.org/cgi-bin/paper?S1600576721002454
Permanent Link: http://hdl.handle.net/11104/0328936 - 5.0548866 - BTÚ 2022 RIV GB eng J - Journal Article
Švecová, Leona - Ostergaard, L. H. - Skálová, Tereza - Schnorr, K. M. - Koval, Tomáš - Kolenko, Petr - Stránský, Jan - Sedlák, David - Dušková, Jarmila - Trundová, Mária - Hašek, Jindřich - Dohnálek, Jan
Crystallographic fragment screening-based study of a novel FAD-dependent oxidoreductase from Chaetomium thermophilum.
Acta Crystallographica Section D-Structural Biology. Roč. 77, JUN 1 2021 (2021), s. 755-775. ISSN 2059-7983. E-ISSN 2059-7983
R&D Projects: GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT EF15_003/0000447; GA MŠMT LM2015063; GA MŠMT(CZ) LM2018130
Research Infrastructure: CZ-OPENSCREEN II - 90063; CZ-OPENSCREEN III - 90130
Institutional support: RVO:86652036 ; RVO:68378050
Keywords : FAD-dependent oxidoreductases * GMC oxidoreductases * Chaetomium thermophilum
OECD category: Biochemical research methods
Impact factor: 5.699, year: 2021
Method of publishing: Open access
https://scripts.iucr.org/cgi-bin/paper?S2059798321003533
Permanent Link: http://hdl.handle.net/11104/0327304 - 6.0541383 - BTÚ 2021 RIV US eng J - Journal Article
Noonepalle, S. - Shen, S. - Ptáček, Jakub - Tavares, M. T. - Zhang, G. - Stránský, Jan - Pavlíček, Jiří - Ferreira, G. M. - Hadley, M. - Pelaez, G. - Bařinka, Cyril - Kozikowski, A. P. - Villagra, A.
Rational Design of Suprastat: A Novel Selective Histone Deacetylase 6 Inhibitor with the Ability to Potentiate Immunotherapy in Melanoma Models.
Journal of Medicinal Chemistry. Roč. 63, č. 18 (2020), s. 10246-10262. ISSN 0022-2623. E-ISSN 1520-4804
R&D Projects: GA MŠMT(CZ) LM2018127; GA ČR GA15-19640S; GA MŠMT(CZ) ED1.1.00/02.0109
Institutional support: RVO:86652036
Keywords : antitumor-activity * force-field * hdac6 * acetylation * gromacs * charmm * implementation * metabolism * discovery * maps
OECD category: Medicinal chemistry
Impact factor: 7.446, year: 2020
Method of publishing: Open access
https://pubs.acs.org/doi/10.1021/acs.jmedchem.0c00567
Permanent Link: http://hdl.handle.net/11104/0318945 - 7.0510107 - BTÚ 2020 RIV GB eng J - Journal Article
Koval, Tomáš - Švecová, Leona - Ostergaard, L. H. - Skálová, Tereza - Dušková, Jarmila - Hašek, Jindřich - Kolenko, Petr - Fejfarová, Karla - Stránský, Jan - Trundová, Mária - Dohnálek, Jan
Trp-His covalent adduct in bilirubin oxidase is crucial for effective bilirubin binding but has a minor role in electron transfer.
Scientific Reports. Roč. 9, SEP 23 2019 (2019), č. článku 13700. ISSN 2045-2322. E-ISSN 2045-2322
R&D Projects: GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) EF16_013/0001776; GA MŠMT(CZ) LM2015043
Grant - others:OP VVV - ELIBIO(XE) CZ.02.1.01/0.0/0.0/15_003/0000447
Institutional support: RVO:86652036
Keywords : MYROTHECIUM-VERRUCARIA * MULTICOPPER OXIDASES * DIOXYGEN REDUCTION
OECD category: Biochemistry and molecular biology
Impact factor: 3.998, year: 2019
Method of publishing: Open access
https://www.nature.com/articles/s41598-019-50105-3
Permanent Link: http://hdl.handle.net/11104/0300661 - 8.0472491 - BTÚ 2017 RIV US eng J - Journal Article
Koval, Tomáš - Ostergaard, L. H. - Lehmbeck, J. - Norgaard, A. - Lipovová, P. - Dušková, Jarmila - Skálová, Tereza - Trundová, Mária - Kolenko, Petr - Fejfarová, Karla - Stránský, Jan - Švecová, Leona - Hašek, Jindřich - Dohnálek, Jan
Structural and Catalytic Properties of S1 Nuclease from Aspergillus oryzae Responsible for Substrate Recognition, Cleavage, Non-Specificity, and Inhibition.
PLoS ONE. Roč. 11, č. 12 (2016), č. článku e0168832. ISSN 1932-6203. E-ISSN 1932-6203
R&D Projects: GA ČR GA15-05228S; GA MŠMT LG14009; GA MŠMT(CZ) LM2015043
Grant - others:GA MŠk(CZ) CZ.1.05/1.1.00/02.0109
Institutional support: RVO:86652036
Keywords : macromolecular crystallography * crystal-structures * resolution * p1
OECD category: Biochemistry and molecular biology
Impact factor: 2.806, year: 2016
Permanent Link: http://hdl.handle.net/11104/0269794 - 9.0456776 - BTÚ 2016 RIV GB eng J - Journal Article
Stránský, Jan - Koval, Tomáš - Podzimek, T. - Týcová, Anna - Lipovová, P. - Matoušek, Jaroslav - Kolenko, Petr - Fejfarová, Karla - Dušková, Jarmila - Skálová, Tereza - Hašek, Jindřich - Dohnálek, Jan
Phosphate binding in the active centre of tomato multifunctional nuclease TBN1 and analysis of superhelix formation by the enzyme.
Acta Crystallographica Section F-Structural Biology Communications. Roč. 71, č. 11 (2015), s. 1408-1415. E-ISSN 2053-230X
R&D Projects: GA MŠMT LG14009; GA MŠMT(CZ) EE2.3.30.0029; GA MŠMT(CZ) ED1.1.00/02.0109
Institutional support: RVO:86652036 ; RVO:60077344
Keywords : tomato multifunctional nuclease * TBN1 * type I nuclease * superhelix
Subject RIV: EB - Genetics ; Molecular Biology
Impact factor: 0.647, year: 2015
Permanent Link: http://hdl.handle.net/11104/0257255 - 10.0447370 - BTÚ 2016 RIV US eng J - Journal Article
Skálová, Tereza - Bláha, J. - Harlos, K. - Dušková, Jarmila - Koval, Tomáš - Stránský, Jan - Hašek, Jindřich - Vaněk, O. - Dohnálek, Jan
Four crystal structures of human LLT1, a ligand of human NKR-P1, in varied glycosylation and oligomerization states.
Acta Crystallographica Section D-Biological Crystallography. Roč. 71, č. 3 (2015), s. 578-591. ISSN 1399-0047. E-ISSN 2059-7983
R&D Projects: GA MŠMT(CZ) ED1.1.00/02.0109; GA ČR GAP302/11/0855; GA ČR(CZ) GA15-15181S; GA MŠMT LG14009; GA MŠMT(CZ) EE2.3.30.0029
Institutional support: RVO:86652036 ; RVO:61389013
Keywords : LLT1 * C-type lectin-like ligand * NATURAL-KILLER-CELLS
Subject RIV: EB - Genetics ; Molecular Biology; EB - Genetics ; Molecular Biology (UMCH-V)
Impact factor: 2.512, year: 2015
Permanent Link: http://hdl.handle.net/11104/0249262