Search results
- 1.0583248 - BTÚ 2024 RIV US eng J - Journal Article
Husťáková, Blanka - Trundová, Mária - Adámková, Kristýna - Koval, Tomáš - Dušková, Jarmila - Dohnálek, Jan
A highly active S1-P1 nuclease from the opportunistic pathogen iStenotrophomonas maltophilia/i cleaves c-di-GMP.
FEBS Letters. Roč. 597, č. 16 (2023), s. 2103-2118. ISSN 0014-5793. E-ISSN 1873-3468
R&D Projects: GA ČR(CZ) GA20-12109S; GA MŠMT EF15_003/0000447
Research Infrastructure: CIISB III - 90242
Institutional support: RVO:86652036
Keywords : n-glycosylation * phosphodiesterase * mechanism * enzyme * S1-P1 nuclease
OECD category: Biophysics
Impact factor: 3.5, year: 2022
Method of publishing: Open access
https://febs.onlinelibrary.wiley.com/doi/10.1002/1873-3468.14683
Permanent Link: https://hdl.handle.net/11104/0351252 - 2.0574533 - BTÚ 2024 RIV US eng J - Journal Article
Malý, Martin - Kolenko, Petr - Stránský, Jan - Švecová, Leona - Dušková, Jarmila - Koval, Tomáš - Skálová, Tereza - Trundová, Mária - Adámková, Kristýna - Černý, Jiří - Božíková, Paulina - Dohnálek, Jan
Tetracycline-modifying enzyme SmTetX from Stenotrophomonas maltophilia.
Acta Crystallographica Section F-Structural Biology and Crystallization Communications. Roč. 79, JUL 2023 (2023), s. 180-192. ISSN 1744-3091. E-ISSN 2053-230X
R&D Projects: GA MŠMT EF16_019/0000778; GA MŠMT EF15_003/0000447; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) EF18_046/0015974
Research Infrastructure: CIISB III - 90242
Institutional support: RVO:86652036
Keywords : FAD-dependent monooxygenases * tetracycline * antibiotic resistance
OECD category: Biochemistry and molecular biology
Impact factor: 0.9, year: 2022
Method of publishing: Open access
https://scripts.iucr.org/cgi-bin/paper?S2053230X23005381
Permanent Link: https://hdl.handle.net/11104/0346203 - 3.0562970 - BTÚ 2023 RIV DK eng J - Journal Article
Adámková, Kristýna - Koval, Tomáš - Ostergaard, L. H. - Dušková, Jarmila - Malý, Martin - Švecová, Leona - Skálová, Tereza - Kolenko, Petr - Dohnálek, Jan
Atomic resolution studies of S1 nuclease complexes reveal details of RNA interaction with the enzyme despite multiple lattice-translocation defects.
Acta Crystallographica Section D-Biological Crystallography. Roč. 78, OCT 1 2022 (2022), s. 1194-1209. ISSN 1399-0047. E-ISSN 2059-7983
R&D Projects: GA MŠMT(CZ) LM2015043; GA MŠMT(CZ) LM2018127; GA ČR(CZ) GA20-12109S; GA MŠMT EF15_003/0000447
Institutional support: RVO:86652036
Keywords : S1 nuclease * Aspergillus oryzae * lattice-translocation defects * nucleotides * nucleosides * complexes
OECD category: Analytical chemistry
Impact factor: 2.2, year: 2022
Method of publishing: Limited access
https://scripts.iucr.org/cgi-bin/paper?S2059798322008397
Permanent Link: https://hdl.handle.net/11104/0340705 - 4.0561062 - BTÚ 2023 RIV GB eng J - Journal Article
Blaha, J. - Skálová, Tereza - Kalousková, B. - Skořepa, O. - Cmunt, D. - Grobárová, V. - Pažický, S. - Polachova, E. - Abreu, C. - Stránský, Jan - Koval, Tomáš - Dušková, Jarmila - Zhao, Y. - Harlos, K. - Hašek, Jindřich - Dohnálek, Jan - Vaněk, O.
Structure of the human NK cell NKR-P1:LLT1 receptor:ligand complex reveals clustering in the immune synapse.
Nature Communications. Roč. 13, č. 1 (2022), č. článku 5022. E-ISSN 2041-1723
R&D Projects: GA ČR(CZ) GA15-15181S; GA ČR(CZ) GA18-10687S; GA MŠMT EF15_003/0000447; GA MŠMT(CZ) LM2018127
Institutional support: RVO:86652036
Keywords : HIGH-LEVEL EXPRESSION * TRANSCRIPT 1 LLT1 * T-CELLS
OECD category: Immunology
Impact factor: 16.6, year: 2022
Method of publishing: Open access
https://www.nature.com/articles/s41467-022-32577-6
Permanent Link: https://hdl.handle.net/11104/0340821 - 5.0560263 - BTÚ 2023 RIV GB eng J - Journal Article
Koval'ová, Terezia - Koval, Tomáš - Stránský, Jan - Kolenko, Petr - Dušková, Jarmila - Švecová, Leona - Vodickova, P. - Spiwok, V. - Benešová, E. - Lipovová, P. - Dohnálek, Jan
The first structure-function study of GH151 alpha-l-fucosidase uncovers new oligomerization pattern, active site complementation, and selective substrate specificity.
FEBS Journal. Roč. 289, č. 16 (2022), č. článku 16387. ISSN 1742-464X. E-ISSN 1742-4658
R&D Projects: GA MŠMT(CZ) LM2015043; GA MŠMT EF15_003/0000447; GA MŠMT(CZ) EF16_013/0001776; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) LM2018127
Institutional support: RVO:86652036
Keywords : active site complementation * crystal structure * gh151 * alpha-l-fucosidase
OECD category: Biochemistry and molecular biology
Impact factor: 5.4, year: 2022
Method of publishing: Limited access
https://febs.onlinelibrary.wiley.com/doi/10.1111/febs.16387
Permanent Link: https://hdl.handle.net/11104/0340729 - 6.0550734 - BTÚ 2022 RIV CH eng J - Journal Article
Dohnálek, Jan - Dušková, Jarmila - Tishchenko, Galina - Kolenko, Petr - Skálová, Tereza - Novák, Petr - Fejfarová, Karla - Šimůnek, Jiří
Chitinase Chit62J4 essential for chitin processing by human microbiome bacterium clostridium paraputrificum J4.
Molecules. Roč. 26, č. 19 (2021), č. článku 5978. E-ISSN 1420-3049
R&D Projects: GA MŠMT(CZ) ED1.1.00/02.0109; GA ČR(CZ) GA20-12109S
Research Infrastructure: CIISB - 90043; CIISB II - 90127
Institutional support: RVO:86652036 ; RVO:61389013 ; RVO:61388971 ; RVO:67985904
Keywords : Adaptation to the environment * Chitinase * Exochitinase * Glycosyl hydrolase family 18 * Human commensal bacterium
OECD category: Biochemistry and molecular biology; Polymer science (UMCH-V)
Impact factor: 4.927, year: 2021
Method of publishing: Open access
https://www.mdpi.com/1420-3049/26/19/5978
Permanent Link: http://hdl.handle.net/11104/0326061 - 7.0549194 - BTÚ 2022 RIV US eng J - Journal Article
Kuchař, Milan - Kosztyu, P. - Daniel Lišková, Veronika - Černý, Jiří - Petroková, Hana - Vroblova, E. - Malý, Michal - Vaňková, Lucie - Krupka, M. - Raskova Kafkova, L. - Turánek Knotigová, P. - Dušková, Jarmila - Dohnálek, Jan - Mašek, J. - Turánek, J. - Raška, M. - Malý, Petr
Myomedin scaffold variants targeted to 10E8 HIV-1 broadly neutralizing antibody mimic gp41 epitope and elicit HIV-1 virus-neutralizing sera in mice.
Virulence. Roč. 12, č. 1 (2021), s. 1271-1287. ISSN 2150-5594. E-ISSN 2150-5608
R&D Projects: GA MZd(CZ) NV15-32198A; GA MŠMT(CZ) EF16_025/0007397
Institutional support: RVO:86652036
Keywords : protein scaffold * combinatorial library * protein mimetics * Env glycoprotein
OECD category: Infectious Diseases
Impact factor: 5.428, year: 2021
Method of publishing: Open access
https://www.tandfonline.com/doi/full/10.1080/21505594.2021.1920251
Permanent Link: http://hdl.handle.net/11104/0325214 - 8.0548866 - BTÚ 2022 RIV GB eng J - Journal Article
Švecová, Leona - Ostergaard, L. H. - Skálová, Tereza - Schnorr, K. M. - Koval, Tomáš - Kolenko, Petr - Stránský, Jan - Sedlák, David - Dušková, Jarmila - Trundová, Mária - Hašek, Jindřich - Dohnálek, Jan
Crystallographic fragment screening-based study of a novel FAD-dependent oxidoreductase from Chaetomium thermophilum.
Acta Crystallographica Section D-Structural Biology. Roč. 77, JUN 1 2021 (2021), s. 755-775. ISSN 2059-7983. E-ISSN 2059-7983
R&D Projects: GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT EF15_003/0000447; GA MŠMT LM2015063; GA MŠMT(CZ) LM2018130
Research Infrastructure: CZ-OPENSCREEN II - 90063; CZ-OPENSCREEN III - 90130
Institutional support: RVO:86652036 ; RVO:68378050
Keywords : FAD-dependent oxidoreductases * GMC oxidoreductases * Chaetomium thermophilum
OECD category: Biochemical research methods
Impact factor: 5.699, year: 2021
Method of publishing: Open access
https://scripts.iucr.org/cgi-bin/paper?S2059798321003533
Permanent Link: http://hdl.handle.net/11104/0327304 - 9.0538228 - BTÚ 2021 RIV GB eng J - Journal Article
Kouba, T. - Koval, Tomáš - Sudzinová, Petra - Pospíšil, Jiří - Brezovská, Barbora - Hnilicová, Jarmila - Šanderová, Hana - Janoušková, Martina - Šiková, Michaela - Halada, Petr - Sýkora, Michal - Barvík, I. - Nováček, J. - Trundová, Mária - Dušková, Jarmila - Skálová, Tereza - Chon, U. R. - Murakami, K. S. - Dohnálek, Jan - Krásný, Libor
Mycobacterial HelD is a nucleic acids-clearing factor for RNA polymerase.
Nature Communications. Roč. 11, č. 1 (2020), č. článku 6419. E-ISSN 2041-1723
R&D Projects: GA MŠMT(CZ) LM2015043; GA ČR(CZ) GA20-12109S; GA ČR(CZ) GA20-07473S; GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) EF16_013/0001776
Grant - others:OP VVV - ELIBIO(XE) CZ.02.1.01/0.0/0.0/15_003/0000447
Institutional support: RVO:86652036 ; RVO:61388971 ; RVO:68378050
Keywords : DNA-directed RNA Polymerase * Bacterial RNA * Sigma Factors
OECD category: Biophysics; Microbiology (MBU-M); Biochemistry and molecular biology (UMG-J)
Impact factor: 14.919, year: 2020
Method of publishing: Open access
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7749160/
Permanent Link: http://hdl.handle.net/11104/0316062 - 10.0510107 - BTÚ 2020 RIV GB eng J - Journal Article
Koval, Tomáš - Švecová, Leona - Ostergaard, L. H. - Skálová, Tereza - Dušková, Jarmila - Hašek, Jindřich - Kolenko, Petr - Fejfarová, Karla - Stránský, Jan - Trundová, Mária - Dohnálek, Jan
Trp-His covalent adduct in bilirubin oxidase is crucial for effective bilirubin binding but has a minor role in electron transfer.
Scientific Reports. Roč. 9, SEP 23 2019 (2019), č. článku 13700. ISSN 2045-2322. E-ISSN 2045-2322
R&D Projects: GA MŠMT(CZ) ED1.1.00/02.0109; GA MŠMT(CZ) EF16_013/0001776; GA MŠMT(CZ) LM2015043
Grant - others:OP VVV - ELIBIO(XE) CZ.02.1.01/0.0/0.0/15_003/0000447
Institutional support: RVO:86652036
Keywords : MYROTHECIUM-VERRUCARIA * MULTICOPPER OXIDASES * DIOXYGEN REDUCTION
OECD category: Biochemistry and molecular biology
Impact factor: 3.998, year: 2019
Method of publishing: Open access
https://www.nature.com/articles/s41598-019-50105-3
Permanent Link: http://hdl.handle.net/11104/0300661