Search results
- 1.0580269 - MBÚ 2024 RIV GB eng J - Journal Article
Jeřábková, M. - Šmrhová, T. - Lopez-Echartea, E. - Dresler, J. - Šuman, J. - Kapinusová, G. - Cajthaml, Tomáš - Škrob, Zdena - Kyclt, R. - Fagerman, J. - Strejček, M. - Uhlík, O.
Silvimonas soli sp. nov., a new member of Chromobacteriaceae isolated from soil in Norrbyskär island, Sweden
.
International Journal of Systematic and Evolutionary Microbiology. Roč. 73, č. 9 (2023), č. článku 006048. ISSN 1466-5026. E-ISSN 1466-5034
R&D Projects: GA MŠMT(CZ) LM2023055
Institutional support: RVO:61388971
Keywords : 16S rRNA gene analysis * Chromobacteriaceae * Norrbyskär * novel species * Silvimonas * soil bacteria and whole genome sequencing
OECD category: Microbiology
Impact factor: 2.8, year: 2022
Method of publishing: Limited access
https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.006048
Permanent Link: https://hdl.handle.net/11104/0349020 - 2.0574682 - MBÚ 2024 RIV GB eng J - Journal Article
Lopez Marin, M. A. - Šuman, J. - Jani, K. - Ulbrich, P. - Cajthaml, Tomáš - Filipová, Alena - Pajer, P. - Neumann-Schaal, M. - Strejček, M. - Uhlík, O.
Solicola gregarius gen. nov., sp. nov., a soil actinobacterium isolated after enhanced cultivation with Micrococcus luteus culture supernatant.
International Journal of Systematic and Evolutionary Microbiology. Roč. 73, č. 1 (2023), č. článku 005678. ISSN 1466-5026. E-ISSN 1466-5034
R&D Projects: GA MŠMT(CZ) LM2018131
Institutional support: RVO:61388971
Keywords : compost soil * extracellular organic matter * Nocardioidaceae * resuscitation-promoting factor * soil bacteria * whole-genome average nucleotide identity
OECD category: Microbiology
Impact factor: 2.8, year: 2022
Method of publishing: Limited access
https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.005678
Permanent Link: https://hdl.handle.net/11104/0347501 - 3.0566474 - MBÚ 2023 RIV GB eng J - Journal Article
Vodickova, P. - Šuman, J. - Benešová, E. - Strejček, M. - Neumann-Schaal, M. - Cajthaml, Tomáš - Rídl, Jakub - Pajer, P. - Ulbrich, P. - Uhlík, O. - Lipovová, P.
Arthrobacter polaris sp. nov., a new cold-adapted member of the family Micrococcaceae isolated from Antarctic fellfield soil.
International Journal of Systematic and Evolutionary Microbiology. Roč. 72, č. 10 (2022), č. článku 005541. ISSN 1466-5026. E-ISSN 1466-5034
R&D Projects: GA MŠMT(CZ) LM2018131
Institutional support: RVO:61388971 ; RVO:68378050
Keywords : Antarctica * Arthrobacter * cold-adapted microorganisms * Micrococcaceae * whole-genome sequencing
OECD category: Microbiology; Microbiology (UMG-J)
Impact factor: 2.8, year: 2022
Method of publishing: Limited access
https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.005541
Permanent Link: https://hdl.handle.net/11104/0337797 - 4.0565771 - MBÚ 2023 RIV GB eng J - Journal Article
Lopez Marin, M.A. - Šuman, J. - Jani, K. - Ulbrich, P. - Cajthaml, Tomáš - Pajer, P. - Wolf, J. - Neumann-Schaal, M. - Strejček, M. - Uhlík, O.
Pedomonas mirosovicensis gen. nov., sp. nov., a bacterium isolated from soil with the aid of Micrococcus luteus culture supernatant containing resuscitation-promoting factor.
International Journal of Systematic and Evolutionary Microbiology. Roč. 72, č. 8 (2022), č. článku 005467. ISSN 1466-5026. E-ISSN 1466-5034
R&D Projects: GA MŠMT(CZ) LM2018131
Institutional support: RVO:61388971
Keywords : compost soil * extracellular organic matter * resuscitation-promoting factor * soil bacteria * Sphingosinicellaceae * whole genome average nucleotide identity
OECD category: Microbiology
Impact factor: 2.8, year: 2022
Method of publishing: Limited access
https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.005467
Permanent Link: https://hdl.handle.net/11104/0337707 - 5.0559438 - ÚMG 2023 RIV NL eng J - Journal Article
Desmarais, M. - Fraraccio, S. - Dolinová, I. - Rídl, Jakub - Strnad, Hynek - Kubátová, H. - Ševců, A. - Šuman, J. - Strejček, M. - Uhlík, O.
Genomic analysis of Acinetobacter pittii CEP14 reveals its extensive biodegradation capabilities, including cometabolic degradation of cis-1,2-dichloroethene.
Antonie van Leeuwenhoek International Journal of General and Molecular Microbiology. Roč. 115, č. 8 (2022), s. 1041-1057. ISSN 0003-6072. E-ISSN 1572-9699
R&D Projects: GA MŠMT(CZ) LM2018131
Institutional support: RVO:68378050
Keywords : Acinetobacter pittii * Chlorinated ethenes (CEs) * cis-1 * 2-dichloroethene (cDCE) biodegradation * Cometabolism * Whole-genome shotgun sequencing * Oxygenase * Phenol
OECD category: Microbiology
Impact factor: 2.6, year: 2022
Method of publishing: Limited access
https://link.springer.com/article/10.1007/s10482-022-01752-6
Permanent Link: https://hdl.handle.net/11104/0332862 - 6.0555017 - ÚMG 2022 RIV GB eng J - Journal Article
Lopez-Echartea, E. - Šuman, J. - Šmrhová, T. - Rídl, Jakub - Pajer, P. - Strejček, M. - Uhlík, O.
Genomic analysis of dibenzofuran-degrading Pseudomonas veronii strain Pvy reveals its biodegradative versatility.
G3-Genes, Genomes, Genetics. Roč. 11, č. 2 (2021), č. článku jkaa030. ISSN 2160-1836. E-ISSN 2160-1836
R&D Projects: GA MŠMT(CZ) LM2015047
Research Infrastructure: ELIXIR-CZ - 90047
Institutional support: RVO:68378050
Keywords : Pseudomonas veronii strain Pvy * biodegradation * dioxygenase * dibenzofuran * whole-genome sequencing * nanopore technology * denitrification * organic phosphate mineralization * heavy-metal tolerance
OECD category: Genetics and heredity (medical genetics to be 3)
Impact factor: 3.542, year: 2021
Method of publishing: Open access
https://academic.oup.com/g3journal/article/11/2/jkaa030/6029021?login=false
Permanent Link: http://hdl.handle.net/11104/0329634 - 7.0549337 - MBÚ 2022 RIV CH eng J - Journal Article
Šuman, J. - Strejček, M. - Zubrová, A. - Čapek, J. - Wald, J. - Michalíková, Klára - Hradilová, Miluše - Šrédlová, Kamila - Semerád, Jaroslav - Cajthaml, Tomáš - Uhlík, O.
Predominant Biphenyl Dioxygenase From Legacy Polychlorinated Biphenyl (PCB)-Contaminated Soil Is a Part of Unusual Gene Cluster and Transforms Flavone and Flavanone.
Frontiers in Microbiology. Roč. 12, OCT 14 2021 (2021), č. článku 644708. ISSN 1664-302X. E-ISSN 1664-302X
R&D Projects: GA MŠMT(CZ) LM2018131
Institutional support: RVO:61388971 ; RVO:68378050
Keywords : aromatic ring-hydroxylating dioxygenases * biphenyl dioxygenase * secondary plant metabolites * flavonoids * polychlorinated biphenyls * functional metagenomics
OECD category: Environmental biotechnology; Environmental biotechnology (UMG-J)
Impact factor: 6.064, year: 2021
Method of publishing: Open access
https://www.frontiersin.org/articles/10.3389/fmicb.2021.644708/full
Permanent Link: http://hdl.handle.net/11104/0325355 - 8.0547230 - MBÚ 2022 RIV CH eng J - Journal Article
Zubrová, A. - Michalíková, Klára - Semerád, Jaroslav - Strejček, M. - Cajthaml, Tomáš - Šuman, J. - Uhlík, O.
Biphenyl 2,3-Dioxygenase in Pseudomonas alcaliphila JAB1 Is Both Induced by Phenolics and Monoterpenes and Involved in Their Transformation.
Frontiers in Microbiology. Roč. 12, APR 30 2021 (2021), č. článku 657311. ISSN 1664-302X. E-ISSN 1664-302X
R&D Projects: GA ČR(CZ) GA17-00227S
Institutional support: RVO:61388971
Keywords : secondary plant metabolites * aromatic ring-hydroxylating dioxygenases * biphenyl dioxygenase * phenolics * monoterpenes
OECD category: Environmental biotechnology
Impact factor: 6.064, year: 2021
Method of publishing: Open access
https://www.frontiersin.org/articles/10.3389/fmicb.2021.657311/full
Permanent Link: http://hdl.handle.net/11104/0323517 - 9.0525373 - MBÚ 2021 RIV GB eng J - Journal Article
Garrido-Sanz, D. - Sansegundo-Lobato, P. - Redondo-Nieto, M. - Šuman, J. - Cajthaml, Tomáš - Blanco-Romero, E. - Martín, M. - Uhlík, O. - Rivilla, R.
Analysis of the biodegradative and adaptive potential of the novel polychlorinated biphenyl degrader Rhodococcus sp. WAY2 revealed by its complete genome sequence.
Microbial Genomics. Roč. 6, č. 4 (2020), č. článku 000363. ISSN 2057-5858. E-ISSN 2057-5858
R&D Projects: GA ČR(CZ) GA17-00227S
Institutional support: RVO:61388971
Keywords : Rhodococcus * biodegradation * PAH
OECD category: Microbiology
Impact factor: 5.237, year: 2020
Method of publishing: Open access
https://www.microbiologyresearch.org/content/journal/mgen/10.1099/mgen.0.000363
Permanent Link: http://hdl.handle.net/11104/0309544 - 10.0518271 - MBÚ 2020 RIV US eng J - Journal Article
Vergani, L. - Mapelli, F. - Šuman, J. - Cajthaml, Tomáš - Uhlík, O. - Borin, S.
Novel PCB-degrading Rhodococcus strains able to promote plant growth for assisted rhizoremediation of historically polluted soils.
PLoS ONE. Roč. 14, č. 8 (2019), č. článku e0221253. ISSN 1932-6203. E-ISSN 1932-6203
Institutional support: RVO:61388971
Keywords : polychlorinated-biphenyls pcbs * contaminated soils * bioremediation
OECD category: Microbiology
Impact factor: 2.740, year: 2019
Method of publishing: Open access
https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0221253
Permanent Link: http://hdl.handle.net/11104/0303441