Search results

  1. 1.
    0499373 - MBÚ 2019 RIV US eng J - Journal Article
    Grinkevich, Pavel - Sinha, Dhiraj - Iermak, Iuliia - Guzanová, Alena - Weiserová, Marie - Ludwig, Jost - Mesters, J. R. - Ettrich, Horst Rüdiger
    Crystal structure of a novel domain of the motor subunit of the Type I restriction enzyme EcoR124 involved in complex assembly and DNA binding.
    Journal of Biological Chemistry. Roč. 293, č. 39 (2018), s. 15043-15054. ISSN 0021-9258. E-ISSN 1083-351X
    R&D Projects: GA ČR GAP207/12/2323; GA MŠMT(CZ) LM2015055
    Institutional support: RVO:61388971
    Keywords : crystal structure * X-ray crystallography * DNA endonuclease
    OECD category: Biochemistry and molecular biology
    Impact factor: 4.106, year: 2018
    Permanent Link: http://hdl.handle.net/11104/0291582
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    J. Biol. Chem.-2018-Grinkevich-jbc.RA118.003978.pdf74.8 MBAuthor´s preprintrequire
     
     
  2. 2.
    0491852 - MBÚ 2019 RIV US eng J - Journal Article
    Sinha, Dhiraj - Bialevich, Vitali - Shamayeva, Katsiaryna - Guzanová, Alena - Šišáková, A. - Cséfalvay, Eva - Řeha, David - Krejčí, L. - Carey, Jannette - Weisserová, M. - Ettrich, Rüdiger
    A residue of motif III positions the helicase domains of motor subunit HsdR in restriction-modification enzyme EcoR124I.
    Journal of Molecular Modeling. Roč. 24, č. 7 (2018), č. článku 176. ISSN 1610-2940. E-ISSN 0948-5023
    R&D Projects: GA ČR GAP207/12/2323; GA MŠMT(CZ) LM2015055
    Institutional support: RVO:61388971
    Keywords : DNA restriction enzymes * Molecular mechanics * Molecular modeling
    OECD category: Biochemistry and molecular biology
    Impact factor: 1.335, year: 2018
    Permanent Link: http://hdl.handle.net/11104/0285462
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    Sinha_et_al-2018-Journal_of_Molecular_Modeling.pdf103.1 MBPublisher’s postprintrequire
     
     
  3. 3.
    0473698 - MBÚ 2018 RIV US eng J - Journal Article
    Bialevich, Vitali - Sinha, Dhiraj - Shamayeva, Katsiaryna - Guzanová, Alena - Řeha, David - Cséfalvay, Eva - Carey, Jannette - Weiserová, Marie - Ettrich, Horst Rüdiger
    The helical domain of the EcoR1241 motor subunit participates in ATPase activity and dsDNA translocation.
    PeerJ. Roč. 5, JAN 18 (2017), č. článku e2887. ISSN 2167-8359. E-ISSN 2167-8359
    R&D Projects: GA ČR GAP207/12/2323; GA MŠMT(CZ) LM2015055
    Institutional support: RVO:61388971
    Keywords : E. coli * Multisubunit enzyme complex * Molecular modeling
    OECD category: Biochemistry and molecular biology
    Impact factor: 2.118, year: 2017
    Permanent Link: http://hdl.handle.net/11104/0270850
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    190_The helical domain of the EcoR124I.pdf57.7 MBPublisher’s postprintrequire
     
     
  4. 4.
    0469849 - MBÚ 2017 RIV GB eng J - Journal Article
    Grinkevich, Pavel - Iermak, Iuliia - Luedtke, N.A. - Mesters, J. R. - Ettrich, Rüdiger - Ludwig, Jost
    pHluorin-assisted expression, purification, crystallization and X-ray diffraction data analysis of the C-terminal domain of the HsdR subunit of the Escherichia coli type I restriction-modification system EcoR124I.
    Acta Crystallographica Section F-Structural Biology Communications. Roč. 72, č. 9 (2016), s. 672-676. E-ISSN 2053-230X
    R&D Projects: GA ČR GAP207/12/2323; GA MŠMT(CZ) LM2015055
    Institutional support: RVO:61388971
    Keywords : restriction-modification system * EcoR124I * HsdR
    Subject RIV: EE - Microbiology, Virology
    Impact factor: 0.799, year: 2016
    Permanent Link: http://hdl.handle.net/11104/0268277
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    190_pHluorin-assisted expression_purification crystallization and X_ray.pdf2562.3 KBPublisher’s postprintrequire
     
     
  5. 5.
    0465331 - MBÚ 2017 RIV GB eng J - Journal Article
    Pevala, V. - Truban, D. - Bauer, J. A. - Koštan, J. - Kunová, N. - Bellová, J. - Brandstetter, M. - Marini, V. - Krejčí, L. - Tomáška, L´. - Nosek, J. - Kutejová, Eva
    The structure and DNA-binding properties of Mgm101 from a yeast with a linear mitochondrial genome.
    Nucleic Acids Research. Roč. 44, č. 5 (2016), s. 2227-2239. ISSN 0305-1048. E-ISSN 1362-4962
    R&D Projects: GA ČR GAP207/12/2323
    Institutional support: RVO:61388971
    Keywords : SMALL-ANGLE SCATTERING * SINGLE-STRANDED-DNA * HUMAN RAD52 PROTEIN
    Subject RIV: EE - Microbiology, Virology
    Impact factor: 10.162, year: 2016
    Permanent Link: http://hdl.handle.net/11104/0264314
     
     
  6. 6.
    0452784 - ÚVGZ 2016 RIV US eng J - Journal Article
    Cséfalvay, Eva - Lapkouski, Mikalai - Guzanová, Alena - Cséfalvay, Ladislav - Baikova, T. - Shevelev, Igor - Bialevich, V. - Shamayeva, Katerina - Janščák, Pavel - Kutá-Smatanová, Ivana - Panjikar, S. - Carey, J. - Weiserová, Marie - Ettrich, Rüdiger
    Functional Coupling of Duplex Translocation to DNA Cleavage in a Type I Restriction Enzyme.
    PLoS ONE. Roč. 10, č. 6 (2015), e0128700. ISSN 1932-6203. E-ISSN 1932-6203
    R&D Projects: GA ČR GAP207/12/2323; GA ČR GAP305/10/0281
    Institutional support: RVO:67179843 ; RVO:61388971 ; RVO:68378050
    Keywords : Escherichia-Coli * Endonuclease ecor1241 * HSDR subunit * RECBCD enzyme * proteins * genes * helicase * sequence * family * domain
    Subject RIV: CE - Biochemistry
    Impact factor: 3.057, year: 2015
    Permanent Link: http://hdl.handle.net/11104/0253781
     
     
  7. 7.
    0437252 - ÚVGZ 2015 RIV US eng J - Journal Article
    Sinha, Dhiraj - Shamayeva, Katerina - Ramasubramani, V. - Řeha, David - Bialevich, V. - Khabiri, Morteza - Guzanová, Alena - Milbar, N. - Weiserová, Marie - Cséfalvay, Eva - Carey, J. - Ettrich, Rüdiger
    Interdomain communication in the endonuclease/motor subunit of type I restriction-modification enzyme EcoR124I.
    Journal of Molecular Modeling. Roč. 20, č. 7 (2014), s. 2334. ISSN 1610-2940. E-ISSN 0948-5023
    R&D Projects: GA ČR GAP207/12/2323
    Institutional support: RVO:67179843 ; RVO:61388971
    Keywords : DNA restriction enzymes * Molecular modeling * QM/MM calculations * principal components analysis * E. coli * Multisubunit enzyme complex * Correlated loop motions
    Subject RIV: EH - Ecology, Behaviour; EE - Microbiology, Virology (MBU-M)
    Impact factor: 1.736, year: 2014
    Permanent Link: http://hdl.handle.net/11104/0240850
     
     


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